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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06501 - Herpes_U55)
Human herpesvirus U55 protein
(Pfam reference: accession no. PF06501)
(Interpro reference: accession no. IPR009479)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 439 aa
(ave. pairwise identity: 0.27)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.91)
nucleotides
(available for above)
3 sequences @ 1317 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 1.73)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 439 aa
(ave. pairwise identity: 0.27)
New Hampshire format
(total tree length: 2.91)