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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF06459 alignment |
| RY44_DROME/4477-4761 | TACATATTCGGCATCCTACTGAACCTGATGCGAGGACCTGCTCCAGAGCAGGAGGAGGAACCGGTAGTGGAGGAGGAAACGTTTGGAAGAGCACTGCCACCGCTGCCGCTTGAAGAACCACCCGGC------------------............ACGGTGCAAGCCTTTGGGCTGGACATCAACAAGGAGGAGAACGGCATGTACAAGGTGGTGGTGCACGAATCTCCAGCCAATTCCTCGATGGAGGAGGGCGGAGAATCCAGTCCCGAGGACGGAGCAGCTGCCAGCGGCGAATTGGTCGAAGGTGAACCACACCAGGAGCCCATTTCCATTGTGGATCTGCTGGGTGGAGAGGCT---------------------------------------------------------------------------GCAAAGAAGGCGGCACAGGAGCGGCAGGAGGCGCAAAAGGCTCAGGAGGCCGCTATGGCCTCCATCGAGGCGGAAGCCAAGAAGTCGTCATCTGCG------------------------------------------------------------CCTCAGGAGACTCCAGCTGTTCACCAGATCGACTTTTCTCAGTACACCCATCGCGCCGTTAGCTTCCTCGCCAGAAACTTCTACAACCTCAAGTATGTGGCCTTGGTGCTGGCTTTCAGCATTAACTTCATGCTGCTCTTCTACAAAGTCACCTCGTTTACCGAAGAAGCAGACAGCTCTGCCGAAGAGGAGCTCATCCTGGGCTCCGGGTCGGGAGGAGGTGCGGACATCACGGGCTCTGGCTTTGGC------..........................................GGATCAGGGGACGGAGGATCGGGCGATGGCGAAATGGAGGACGAGATACCGGAACTTGTGCACGTGGACGAAGACTTCTTCTAC---------------------------ATGGAACACGTTCTCCGCATTGCGGCATGTCTGCACTCACTTGTCTCCCTGGCCATGTTGATTGCCTACTACCACCTCAAGGTTCCATTGGCCATC |
| O61567_HOMAM/867-1147 | AAGGTGTGGGGCGCCATCATGAGCCTCATGCAAGGACCGCCCGTCGAGCAGGCTGAGGCGAACGAACAGAAGTCTGGCCCGCTGGTGCCTTTATCCGTCCCAGCGTTACCGGGTGTCATGGAAGGA------------------............GAGCCGCCACCACCTCCATCAGAAATTAAGCCTGAGGGAGAA---------CAACTCTCGCTGGAGGCCAAGCCAGAAGACACCTTGGATGAGGAGAAGATGAAGCCCATGCTGGAT------------GCTCTGGCCGAACTCAAGGACGACATCACCCCAGAGCAGGCCATTGCTGCTGTCAAA---------------------------------------------------------------------------------------------------------GCTGCTGAGAAGAAGGCCGTGGAGGCTGCCCAGCAGGAGGCCATGGCGGAGGCCGAGGTG---------CAGCCTTCAGCCGCC------------------------------------------------------------GCTGCTGAACCTCCCCCAGTTGCCCAGGTGGACTTAAGCAGCTACAACAAGCGGATTGTCAGCTTCCTGGCGAGGAACTTCTACAACCTCAAATACGCGGCTCTCGTGCTTGCCTTCTGCATCAACTTCATCTTGCTCTTCTTTAAGGCCTCAGCTCTGGCTGGCGAGGAGGAGGAAGAGGAAGAGGTGGTAGTTCACAATCCCTTCGCCTTTGGCTCTGGTGACCTGCTGGGGTCTGGTGACGGGGCGGTGCTGggtgacgacgcggaagaacttggctctggcaactttactctcGGCGAGGATGACGGCGATGACGACGACGAAGACGAGGACGAAGAGGCTGAAGAATGGATCCACATGGACGACCGCTACTTCTAC---------------------------CTGGCCCACGTCATCCGTCTCTTCTCCGTCACCCACAGCATCGTCGCTCTTTGCATGTTGCTTGCTTATTACCACCTCAAGATTCCGCTGGTGATC |
| Q8TA74_HEMPU/4706-4952 | TCGATG---------------------------------------------------------------------GACACTGTGTCTGCCTTTGGCATCGACTTCTTGAAAGGCAAGGGAGGAGGAGGAGGCGGCGGAGCAGGA............GGCACTGACCAGTACAAGCTCAGGATGAGGAGGAAACGGCGACCTTTGACCCCATCGTCTAGCTTTGACTTTGACGAGGAGATGTCCATGGACAACATGCCAACCCACACCCCCTCCGAAGCCTCCGATAGTTCCTTTGATTCAGGAGCCATGGCCAAGAATGACTTTTCCATGCCAGATATGTCTGCAGGGCGTCGTGATAGCACTGTCTTCCCAAGTCTCTTCCTAGCAACA---------------------------------------------GAGATGCCATCAACCCAAGTCAAGGAAGAAGAGGAGGAGGAGGAG------------------------------------------------------------------------------------------------------------------------------CCGGTCTACGAGCCTCAGATGAACAGGGTCAAACAAACCGTCGTGAGTCTGTTTGCAAGGAACTTCTACAACATCAAGTATGTTGCTCTAGCCTTGGTCTTCTGTATCAACATCCTTCTTCTCTTCTTCAAGGTATCCTACTTGACGGCAGAACTGGAGGAGGTAGACCCATACCACCCCGTCGAGATCCTGGAGAATGCAACATCACCCAATGGTGCAGACATGGCA------------..........................................---------------------GGTGACGAAGACCGGGTAGATGATCAGATAGAACAGATACTCATCAATCAACAGTTCATGTAT---------------------------CTTGTGCCCGTCTTGCAAGTCCTCTCCATCCTTCATTCCCTGGTGTCTATCTCTATGCTGATTGCATACTGTGCACTCAAGGTTCCGCTGTGCCTG |
| Q95201_MUSVI/4223-4493 | GACATGCCTGACCCCACCCAGTTTGGTATCCATGATGATGCT---CTGGATGCTGAGCGGGCAGAGGTGACTGAGCCAGGGGTTCCACCCGAACTAATTCACTTCGTGAAGGGTGAGAAGGGAGATGCAGATATT---------............ATGTCAGATCTCTTTGGATTCCACCCGAAGAAAGAAGGAGGC------------------------------------------------------------------TTAAAGCATGGGCCTGAAGGGGGTTTGGGTGACCTCTCTGAGATTATTGGCAAGGATGAACCCCCTACACTAGAGAGTACTGTCCGGAAGAAAAGG------------------------------------AAAGCACAGGCAGCTGAGATGAAAGCAGCACATGAAGCCGAAGGGAAAGTGGAGCCTGAGAAGACAGACCTAGAAGACGGGGAGAAGGAGGATACGGCCAAAGAGGAAGAGCAGGCCGAGGCCCTGTGGGCAGAT---------------GTGACAAAGAAGAAGAAGCGACGGCGGGGCCAGAAAGTCGAGAAGCCTGAAGCCTTCATGGCTAATTTCTTCAAAGGGCTGGAAATCTATCAGACCAAGTTACTGCATTACCTGGCCAGGAATTTCTACAACCTGAGGTTCCTCGCTCTGTTCGTAGCCTTCGCGATCAACTTCATCCTACTCTTTTATAAGGTCACCGAGGAACCTGTAGAAGAAGAGACAGAAGACGTTGCAAATCTGTGGAATTCCTTTACC---------------------------------------------..........................................---------------------------GATGAGGAAGAGGAAGAAGCGATGGTGTTCTTTGTCCTGCAGGAGAGCACTGGGTAC---------------------------ATGGCACCCGCATTGCGGGCCTTGGCCATTATCCACACCGTCATCTCTTTGGTCTGTGTGGTGGGCTATTACTGCCTGAAGGTCCCTCTGGTGGTA |
| Q91319_RANCA/4232-4502 | GACATGCCTGATCCCACTCAGTTTGGAATCCACGACGATGTC---CTGGAAAATGAAAAAGCAGATGCCCCTGAACACACTTCATCATCAGAACTTGCCCATCTTGTAAAAGGAGAGAAAGGAGAGATTGAT------------............ATGCCTGATATATTTGGTTTACAAACAAAAAAAGAAGGCTCT---------------------------------------------------------------------AAGCATGGTCCAGAAATTGGCCTAGGTGACTACTCTGAGAATGTAGGAACAGAGAATACAACAAGCTTGGAAAGTGCTGTCCACAAGCAAAGA------------------------------------AAAGCACTTGAAGCAGAAATTGCAAAAGAACATGAGGACAACTCAAAAGCTGAATCAGAGAAGGCTGACATGGAGGATGGTGAGAAAAAGGACAAAGCTAAAACTGAGGAACAGTCTGAATTCTTGGAAAGCAAA---------------GCAGAACCAAGAAAGAAGAGGAGACGCGGACAGAAAAAAGAAAAGCCTGAAGCATTTATGGCAAATTTCCTGGCAGGATTAGAGATCTACCAAACCAAAATGCTAAATTATCTGGCAAGAAATTTCTACAATCTACGATTCCTTGCTCTGTTTGTTGCATTTGCCATTAACTTCATTTTATTGTTCTACAAGGTAACGGAGGAACCAGCCAGTGATGACACAGATAATGAACCAAATCTCTGGAACACATATCAG---------------------------------------------..........................................---------------------GAAGATGAGGAGGAAGCAGAGGAGGGAGCCGTTTACTTTGTTCTACAGGAATCCACTGGCTAC---------------------------ATGGCTCCAACATTGCGTATCCTGGCTGTTATTCACACCATAATTTCTTTCCTCTGTGTTATTGGATATTACTGTCTTAAGGTTCCTCTGGTGGTA |
| O08661_RAT/9-275 | AACATGCCAGACCCTACTCAGGATGAGGTGCGAGGAGATGAA------GAGGAGGGAGAGAGGAAGCCATTAGAGTCAGCCCTGCCCTCTGAAGACCTAACGGACTTGAAGGAACTGACGGAGGAAAGTGACCTT---------............CTTTCAGACATATTTGGCTTGGATCTGAAGAGAGAAGGAGGG------------------------------------------------------CAGTACAAACTAATTCCTCACAACCCAAATGCTGGTCTCAGTGACCTCATGACGAACCCCATCCCTGTCCCTGAGGTACAAGAAAAGTTTCAGGAGCAGAAGGTAAAA------------------------------------------------------GAAGAAAAGGAAGGAAAGGAAGAAACCAAGTCTGAACCGGAGAAGGCTGAGGGAGAGGATGGAGAAAAAGAAGAAAAAGCCAAAGATGATAAGGGTAAACAGAAGTTGAGGCAGCTT---------------------------------------CATACACATCGATATGGGGAGCCTGAGGTCCCCGAGTCAGCATTCTGGAAGAAAATCATAGCCTACCAACAGAAGCTGCTGAACTATTTTGCTCGCAACTTTTACAACATGAGAATGCTGGCCCTGTTTGTCGCCTTCGCCATCAATTTCATCCTGCTCTTCTACAAGGTCTCCACTTCTTCTGTGGTTGAAGGAAAGGAGCTGCCTACCCGAACTTCCAGCGATGCCGCTAAAGTGACCACCAGC------------------------------..........................................---------------------CTGGACAGCAGCCCCCACAGAATCATTGCGGTTCACTACGTCCTGGAGGAGAGTAGCGGCTAC---------------------------ATGGAACCCACCTTGCGCATCCTAGCCATCCTCCACACCATCATATCCTTCTTCTGCATCATCGGATACTACTGCCTGAAAGTCCCCTTGGTTATT |
| Q91313_RANCA/4371-4670 | AGTATGCCAGATCCTACACAAGATGAAGTTCACGGAGATGGTCTTCCTGTGGTGGTCAGCGACGAATTACCTGAGGCTGGTGATGCGATGGACTTTACTGATGCAGGCAAAGAAGAAGTGCAAGAAGAA---------------............GGGGCAGAAATATTTGGGCTGGAACTAAAGAAAGATGGTGGA------------------------------------------------------CACTATAGACTCAGTGCTCCAGATGCCCCTGGCGGCCTGGGTGATATGGGAGAAACCACTCCAGTAGAACCACCAACCCCAGAGGGATCGCCCATCTTGAAGAGGAAATTTGGAGATGATGAAATCCAACATTTGGATGGTTCCGATCAGCCACAACCAGCAGCAGAAGAAGAGCCA------GAACCAGAACCAGAACCAGAGAAAGCAGATTTGGAGAATGGAGAAAAGGGTGAAACTGCTGTGGAAGAAGAAGCAACTCCTGCTCCTGAGGAACCCGAAGAACCACCAGTTAAGGCCCCCAAGAAAAAGACCCCTCAAAAGGAGAAGAAAGCAGAAGCTGGAGAGGGAGGTTTTGAATTCTGGAATGAGCTGGAGATCCAGAGGATAAAATTCTTGAACTATCTCTCAAGGAATTTCTATAATCTGCGTTTCTTGGCACTATTCTTGGCTTTCGCTATCAACTTTATTTTGCTGTTCTACAAGGTGTCTGATTCTCCCAAAGGCGAGGAAGATTTTGAGGGATCAGGGATGGAGGAGGAACTATCCATCCTGGATGAAGGAAGTGGTGCTGGT------------------..........................................---------------------GGAGATGAAGAAGATGAAGATGATGGCATAGTGTATTTTTTCCTGGAGGAAAGCACAGGATAC---------------------------ATGCAGCCGACACTATACTTCCTTTCCATTGTTCACACTCTTATTTCCTTCTTATGTATCATTGGCTACAATTGTCTGAAGGTTCCTCTGGTTATC |
| RYR1_RABIT/4381-4670 | GGCATGCCCGATCCCACCAGCGACGAGGTGCACGGCGAGCAG---CCGGCCGGGCCCGGCGGCGACGCGGACGGCGCGGGCGAGGGCGAAGGCGAGGGCGACGCGGCCGAGGGTGACGGCGATGAGGAGGTGGCGGGTCACGAGgccggcccgggcGGTGCCGAG------GGGGTCGTGGCCGTGGCCGACGGGGGC------------------------------------------------------CCCTTCCGG---------CCCGAGGGCGCTGGCGGCCTTGGGGACATGGGCGACACCACGCCGGCGGAACCGCCCACGCCCGAGGGCTCCCCGATCCTCAAGAGGAAGCTGGGGGTGGAT---------------------GGAGAAGAGGAGGAGCTGGTTCCAGAACCGGAGCCC------GAGCCCGAGCCTGAGCCTGAGAAAGCCGATGAGGAGAACGGGGAGAAGGAGGAA---------------------------GTCCCCGAGGCCCCACCAGAACCCCCCAAGAAAGCCCCT---------CCCTCACCTCCTGCAAAGAAGGAGGAAGCCGGAGGCGCCGGCATGGAGTTCTGGGGAGAACTGGAAGTGCAGAGGGTGAAGTTCTTGAACTACCTCTCCCGGAACTTCTACACCCTGCGCTTCCTTGCCCTCTTCTTGGCGTTTGCCATCAACTTCATCCTGCTGTTTTATAAGGTCTCAGACTCTCCACCAGGGGAGGATGACATGGAGGGCTCGGCAGCAGGGGACCTGGCGGGTGCAGGGTCCGGGGGCGGCTCCGGCTGGGGCTCGGGGGCCGGCGAG..........................................---------------------GAGGCAGAGGGGGACGAGGACGAGAACATGGTATACTACTTCCTGGAGGAGAGCACGGGCTAC---------------------------ATGGAGCCGGCCCTGTGGTGCCTGAGCCTGCTGCACACGCTGGTGGCCTTCCTCTGCATCATCGGCTACAACTGCCTCAAGGTGCCCCTGGTGATC |
| O13054_MAKNI/4422-4713 | AGCATGCCAGATCCCACGCAGGATGATGTGCATGGAGATGGACCAGGGGAGCCAAGGACAGGGGAAGAACAAGACACTGGAGGGGTAACAGATACTGGAGAGACTGGGAGTGGTGAGGAGGAAGAGGAGGATACT---------............------------------------CAGGAAAAAGAGGGTGGG------------------------------------------------------------AGGATACCAGGTATCGATGCTCCAGGCGGACTTGGAGACATGGGTGTGGAGGCACCTGTTGAACCTCCAACTCCTGAAGGAACTCCCATAACAAAGAGAAAAATGCAACCAGAAGAG------------------ACTGATGCCAGCCAGAAGCCACCTGAACCTGTTCCTGTAGAGGAGCCTCCTCAAGAGCCTGAAAAGGCTGATGTTGAAACTGGAGAGAAGGCAGAGAAAGAATCCCAGAGCAAAGAGAAAGAAGAGCCAGAAGAACCA---------------------------AAGAAATCTGCAACAAAAAAAGAAAAGAAGCTGAAAAAGGAAGGAGGTTTTCAAATCTGGACTGAGCTGGAAACCCAAAGAAATAAATTTATGAACTACCTTTCAAGAAACTTCTACAACCTGCGTTTTTTGGCTCTGTTCCTTGCATTTGCCCTGAACTTCATTCTGCTATTCTACAGGGTATCTGACACCCCGCCTGAGGGCGAGGAGATGGAAGGATCTGGATTGTTTGAGGGAAGCGGGATGTTCGAGGGCTCTGGGTTGTTTGAAGATTTGGGAGAAGAAGCT..........................................GAGGGATCTGGAATGGATGAAGGAGGAGATGAGGACGAGGAAGACATGCCAGTTTTTTACTATTTAGAGGAGAGGCACTGCTAC---------------------------ATGCAGCCCACACTGGCCTTCCTTGCCATCCTGCACACAGTCATCTCATTCATCTGTATCATCGGCTACAACTGCCTCAAGATTCCACTGGTGATC |