EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06328 alignment
(11 sequences with 309 bp)


Q9W6U9_CHICK/27-117 CTTGTACAATCATGTGGTCACATCATTCCAGAGTCTCCAGTATTGGCCCTGGGTTCCAATTTCACAGCATTGTGCATTTTGAAC------GAGAGTTGCCTTGACTTTGGCAATATATATGCTAGTCAGATTATATGGAAAATGAAAAATAAA...GTGATACCTAAAGAACAATACCGTGAAATAAACAGAACTGTT------TCTAGTGTCACATTTAATGACACTTCTTCACTAGCTTCT---------------------CCTCTGACATGCAACGTTTTAGCAGATGGACAGATTGAGCAGAAT
IL6RB_HUMAN/24-114 CTTCTAGATCCATGTGGTTATATCAGTCCTGAATCTCCAGTTGTACAACTTCATTCTAATTTCACTGCAGTTTGTGTGCTAAAG------GAAAAATGTATGGATTATTTTCATGTAAATGCTAATTACATTGTCTGGAAAACAAACCATTTT...ACTATTCCTAAGGAGCAATATACTATCATAAACAGAACAGCA------TCCAGTGTCACCTTTACAGATATAGCTTCATTAAATATT---------------------CAGCTCACTTGCAACATTCTTACATTCGGACAGCTTGAACAGAAT
O57519_XENLA/23-109 CTAGTAAAGGTATGTGGTCGCATATTTCCGGACCCTGGTATCGTGCATGGTGAAAGGCCGTTCACAGCTTACTGTGTCATTAAT------CAGACTTGTCTC---------AGAGAAGATGCCAGTAGAATATATTGGCTTGTCAAAGGTGTT...AAGGTACCAGAGACGCAGTACGAGATCTTAAACCAAACGACT------TCAAGTGTAACTTTTGAGAACCTTACTACTCTGAACAGT---------------------CCTCTGACGTGTAATGTAATGGCATCTGGACATGTTGCA---AAT
Q9DDK1_MELGA/322-414 GCTGAAGTGCTGTAC---------TTCCCTACTAAGATACTGACCAGTGTTGGTTCTAACGTTTCATTTCATTGCATCTATAAA------AACAAAACCAAG---------AGCGTAGCGTCCAAGAAGATTGTTTGGTGGCTGAATTTAGCAgaaGAATCCCCAGAAAGTCAGTATACGCTTGTGACCGATCGCGTA------AGCAAAGTTACTCTTTTCAACTTGAAAGCAACAAAACCTAGAGGAAGTTTCTTCTCTAACGCATTGTACTGTTGCCATCAAAATAGGGAATGTCATCATAGATAC
LEPR_RAT/329-420 CAAGATGTCATGTAT---------TTTCCACCCAAAATTCTGACGAGTGTTGGATCCAATGCTTCCTTTTGCTGCATCTACAAA------AATGAGAACCAG---------ACTATCTCCTCAAAACAAATAGTTTGGTGGATGAATCTAGCCgagAAGATCCCCGAGACACAGTACAACACTGTGAGTGACCACATT------AGCAAAGTCACTTTCTCCAACCTGAAAGCCACCAGACCTCGAGGGAAGTTTACCTATGATGCAGTGTACTGCTGCAAT---GAGCAGGCATGCCATCACCGCTAC
LEPR_PIG/331-422 CAAGATGTTATATAC---------TTTCCACCTAAAATTCTGACAAGTGTTGGGTCTAACATTTCTTTTCACTGCATCTATAAA------AATGAGAACAAG---------ATCGTTTCCTCAAAAAAGATTGTTTGGTGGATGAATTTAGCTgagAAGATTCCTCAAAGTCAGTATGATGTTGTGGGTGACCATGTT------AGCAAAGTCACTTTTCCCAATATGAATGCAACCAAACCTCGAGGAAAGTTCACCTATGATGCAGTGTACTGCTGCAAT---GAGCACGAGTGCCACCATCGCTAT
CSF3R_HUMAN/22-111 AGTCTGGAGGAGTGCGGGCACATCAGTGTCTCAGCCCCCATCGTCCACCTGGGGGATCCCATCACAGCCTCCTGCATCATCAAG------CAGAACTGCAGCCAT------CTGGACCCGGAGCCACAGATTCTGTGGAGACTGGGAGCAGAG...CTTCAGCCCGGGGGCAGGCAGCAGCGTCTGTCTGATGGGACCCAGGAATCTATCATCACCCTGCCCCACCTCAACCACACTCAG------------------------GCCTTTCTCTCCTGCTGCCTGAACTGGGGCAACAGCCTGCAGATC
CSF3R_MOUSE/22-112 AGTCTGGAGAGCTGTGGACACATCGAGATTTCACCCCCTGTTGTCCGCCTGGGGGACCCTGTCCTGGCCTCTTGCACCATCAGC------CCAAACTGCAGCAAA------CTGGACCAACAGGCAAAGATCTTATGGAGACTGCAAGATGAGcccATCCAACCTGGGGACAGACAGCATCATCTGCCTGATGGGACCCAAGAGTCCCTCATCACTCTGCCTCACTTGAACTACACCCAG------------------------GCCTTCCTCTTCTGCTTAGTGCCATGGGAAGACAGCGTCCAACTC
I12R2_HUMAN/27-111 GCGTGCAAGAGAGGCGATGTGACTGTGAAGCCTTCCCATGTAATTTTACTTGGATCCACTGTCAATATTACATGCTCTTTGAAGCCCAGACAAGGCTGCTTTCACTAT---TCCAGACGTAACAAGTTAATCCTGTACAAGTTT---------...------------------GACAGAAGAATCAATTTTCACCATGGCCACTCCCTCAATTCTCAAGTCACAGGTCTTCCCCTTGGTACA---------------------ACCTTGTTTGTCTGCAAACTGGCCTGTATCAATAGTGATGAAATT
I12S_PIG/27-111 GTGTGCAAGAGAGGGGATGTGACGGTGCAGCCTTCCCATGTAATTTCACTTGGATCAGCTGTCAACATTTCATGCTCTTTGAAGCCCAGGCAAGGCTGCTTACAAGTC---TCCAGTTTAAACAAGCTAATCCTCTACAGGTTC---------...------------------CACAGGAGAATCCACTTTCAGCGTGGTCACTCCCTCAGTTCTCAAGTCACAGGTCTTCCCCTGGGTACC---------------------ACCCTGTTCGTCTGCAAACTGGCCTGTAGCAGTAAGGAGGAGATT
I12R2_MOUSE/27-121 GTGTGCAAGCTTGGCACTGTGACCGTCCAGCCTGCCCCTGTGATTCCTCTTGGGTCAGCTGCCAATATTTCCTGCTCCTTGAATCCCAAGCAAGGCTGTTCACATTAT---CCCAGTTCTAACGAATTAATCCTCTTAAAGTTTGTCAATGATgtcCTTGTTGAAAATCTCCATGGCAAGAAAGTCCATGACCACACTGGTCACTCCTCCACTTTTCAAGTCACCAACCTGTCCCTTGGTATG---------------------ACCTTGTTTGTCTGCAAGCTAAACTGTAGCAACTCTCAAAAGAAG