EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06250 alignment
(7 sequences with 1002 bp)


Q9JMP5_9VIRU/12-328 ...TTTTTAGAGCAGTTGAAAGAACAGATTGCTACTAGTCGTTATAAAGCAGCACTAGCAGTAAATAGCAAGCTTATTGTGCTTTACCACCATATTGGTACAGAGATCTTAAAACGCCAAAAA------------GAGCATGGCTGGGGTGCTAAAATCATAGATCAGCTAAGTAAGGATTTAAGAAGCGCATTTCCAGAAATGAAAGGTTTTAGTCCTAGAAATTTGAAGTATATGCGTAAATTTGCTGAGGAGTATTCTGATATTGAATTTGTGCAGGAGCCTCTTGCACAATTGACTTGG------------TACCACAATGTTACTCTTTTAGAAAAGATAGAGAGTCGAGAAACAAGGTTGTTTTATATAAAAGAAGCAATTGAACATGGCTGGTCAAGAAACATCATGGTAATGCAGATTGAACTTGGGTTGCATAAGCGTCAG------GGAAAGGCTATCACGAATTTCAAAGAGAAG------------CTAACTTCACCTCAATCAGATTTAGCGCATTACACACTAAAAGATCCATATATTTTCGATTTTTTAAGTATAGGAAAGGAT------GCTAATGAAAGAGAAGTAGAAAAAGGGCTTGTAGGACATGTAGAGAAGTTTTTGCTAGAGCTTGGTGAAGGCTTTGCATTTGTTGGTAGGCAATTTCACTTAGATGTAGGAAATAAAGATTTCTATATTGATTTATTGTTTTACCATTTGAAGCTACGTTGCTTTGTAGTAATTGAGCTAAAAGACAAAGATTTCAAGCCAGAATATGCAGGTAAAATGAATTTTTATCTTTCAGCCGTTGATGATTTACTAAAGCATGAGACAGATCAACCATCTATAGGATTAATTTTATGCAAGTCAAAGGATAACGTACTAGCTAAGTATACACTTAAAGACATAAATAAACCGATAGGGTTGGCAGAATATAAAATTACTGAAAATCTACCAGAGAATGTAAAGACAGCCTTGCCAACAATA
Q8Q0D4_METMA/12-328 ...CTGTTTGGAGAAATCAAAAATCGAATACTTAAAGGCCAGTACGAGGCTTTAAAGGCAGTAAATAGGGAATTGATCTCAGTTTACTGGGATATTGGAAAGTTGATTGTTGAAAGGCAAAAA------------AGTGAGACATGGGGCAAGTCCGTTGTCGACCAGCTTTCAAGAGACCTCCAGGAGGAGTTCCCTAGAGTAAGGGGTTTTTCTGCCTCAAATATCTGGCGCATGAGGATGTTTTATCTCACATATGCCGACAATCAAAAACTCGCACCATTGGTGCGAGAAATCGGATGG------------ACTCACAATATAGCAATTATGGAAAAGTGTAAAGATGACCTTGAACGCGAATTTTATCTTCGTACAACCCGGAAATTCGGGTGGACTAAAAATATTCTGATAGTTCAGATTGAAAACGATACTTACAAAAAGACCCTGCTCAACCAGACGAATTTTGAAACAACC------------------CTCCCGGCAGAAATTCAATCTAAGGCAAAACTCGCAATTAAGGATGAATATACTTTCGATTTCCTCGAACTCGGAGATCTC------CACTCAGAAAAGGAACTCGAAAAGGAAATTCTCTTAAAACTGGAAGCTTTCCTCCGGGAAATGGGTGGAATGTTTACCTTCATAGGCAGTCAGTACCGCATTCAGGTAGAAGATGAAGAATACTTCATCGATCTTCTTCTCTTCCACCGGGCTATAAACTGCCTCATCGCAGTAGAACTTAAAATTGGCAAATTCCTCCCAGAATACATAGGAAAAATGCAGTTTTATCTGGCCCAGCTAGACGATTTCGTAAAGCAGCCCCACGAAAATCCCTCTATCGGCATCATCCTATGCAAATCCAGAAACAAAACCATTGTAGAATATGCTCTTCGCGAATCAAACAAGCCCATTGGTGTTGCTGAGTACAAAATTGTTTCTACACTGCCAGAAAAACTCAAAGGAAAATTACCCTCTCCT
Q8RDR0_FUSNN/8-327 ...ATTTACAAAGAAATTAAAAGTATTTTAGAACAAGCAAGAAATAAAGTGTATAAAGTAGCTAATAGTACTATGGTTCAGGCATACTGGAATATAGGAAGAGTAATTGTTGAA---AAGCAGGGAGGTAATAATAAAGCTGAATATGGGGCAGCTTTAATAAAAAATCTTTCAAAAAAGATGACAAAAGAATTTGGA------AAAGGTTTTACAGTTGCTAATTTGAAGAATATGAGGCAATTTTATTTAATTTTTCAA---------AAAAGCTACGCACTGCGTAGCGAATTAACTTGG---------------ACACATTATAGATTGCTTATGAGAGTAGAAAATGAAAATGCTAGAAATTTTTATATAGAAGAATGTATCAAATCTAATTGGAGTACAAGACAACTTGAAAGACAAATAACAACTCTTTTTTATGAAAGATTACTTTCTAGCAAGGATAAAGAAAAAGTATCAAAAGAG------ATATATAAATTAGAACCTCAAATCAAAAAAGCAGAAGATATTATAAAGGATCCTTATGTATTAGAATTTTTAGGTCTACTAGAAAATACAAATTTTTTAGAAAAAAATTTAGAACAAGCATTAATAAATCATTTACAAAAATTTTTATTAGAGCTTGGAAGAGGATTTTCATTTGTAGCTAGGCAAAAAAGAATTACTTTTGATGGAAGACACTTTTATATAGATTTAGTATTTTATAATTATCTTTTAAAATGTTTTGTGCTAATTGATTTAAAAGTTGGAGATTTAACTCATCAAGATTTAGGACAAATGCAAATGTATGTTCATTATTTTGAAGAAGAAATGATGAATGAAGGAGATAATTCACCAATTGGGATTGTATTATGTGCAGATAAAAGTGATTCAATAGTAAAATATACTTTATCAAAAAATGAAACACAAGTTTTTGCCTCAAAGTATAAAGCATATTTGCCTAGTGAAGAAGAATTATTATCAGAAATAAAAAGGGAA
Q8TLP0_METAC/12-331 ...ATATATGCCGAAGTAAAAAATATAATAGAACACACAAGAGATAATGTTTACAAAAGTATCAATTCCAATCTGGTGCTTGCCTACTGGAACATAGGCAAAATAATTGTTGAAGAGGAACAGAAAGGGAGCAACAGGGCAGAGTACGGAACATTTCTTATTCAAACACTTGCCGAAAGATTGACTAATGAATTCGGA------AAAGGCTTCAACAAGTCGAATTTAAAGTACATGAGAAACTTTTACACAGCATTCCCA---------ATTCGCCAAGCACTGCTTGGCGAATTGTCCTGG---------------ACTCACTACAGATTATTAAGCAGCGTAAAAAATGAAGATGCAAGAGGCTTTTATCTTATTGAAACTGCCAAAAACAGATGGAGCACACGGGAACTGGAAAGGCAGATCAATTCCCTGCTCTATGAAAGGCTCGCATTAAGCAAAGACCCTGACGAAGTAAAGAAACTC---------TCGACCCAGGGCAACCTGATAAAAACCTCAAAAGACCTGATCAAAGATCCCTATGTCCTCGAATTTCTGGGCATAAAGCAGCAGCAAAACTTTTTTGAAAAAGATCTTGAAGCCCTCCTCATCAGCCGCCTTCAGGAATTCCTCCTTGAACTGGGAGCCGGCTTCGCCTTCGTGGAACGTCAAAAAAGGATCACGGTTGACGGAGATCATTACTACATCGACCTTGTTTTTTACAACTACATCCTCAAGTGCTTCGTGTTAATAGACCTCAAACTTGGCAAACTCACCCACCAGGACATAGGCCAGATAGACTTCTACGTCCGGTACTTCGAAAAAGAAGAAAAGCAGCCCGGAGACAACCCCACAATCGGCCTCATCCTCTGCTCAAACAAAAACGAAGCAATGGTAAAGTATACTCTGCTTAACGAAAGCAAGACCCTTTTTGCCTCAAAATACAAACTTTACCTGCCAAGCGAGGAAGAATTGAAGAAAGAACTTACCAGAGAA
Q8X9H3_ECO57/15-338 ...ATCCACGACGGTATTATTCACCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGCTGATGACCGCGACATACTGGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTAAGTCTAAGGTATAAG------CGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCGCCAGACAGTGTCTGGCGAATTAACA---CCATTGCCCTGGTCCACTTACGTCCGTTTACTT---TCCGTTAAAAACGCTGACACCCGCAGCTTTTATGAAAAAGAGACGCTCCGCTGTGGCTGGTCTGTTCGCCAGCTAGAACGGCAAATTGCGACCCAATTTTATGAGCGAACACTGCTGTCACATGACAAATCAGCCATGCTGCAACAA---------CACGCTCCTGCCGAGACGCATATTCTTCCGCAACAGGCGATACGCGATCCCTTTGTGCTCGAATTTCTGGAATTGAAAGATGAA------TACTCAGAATCCGATTTTGAGGAGGCGCTGATCAACCACCTGATGGATTTCATGCTGGAACTTGGGGATGATTTTGCCTTTGTTGGTCGGCAGCGAAGGTTACGCATTGATGACAACTGGTTTCGTGTCGATCTGCTGTTTTTCCACCGCCGTTTACGCTGCCTGCTAATCGTCGATCTAAAAGTGGGCAAATTCAGCTATAGCGATGCCGGACAGATGAATATGTATCTCAACTACGCCAAAGAGCACTGGACGCTACCGGATGAAAATCCGCCCATCGGTCTGGTTCTCTGTGCAGAGAAAGGAGTCGGAGAAGCGCATTATGCACTGGCTGGTTTGCCTAACACCGTTCTGGCGAGTGAATATAAGATGCAACTACCTGATGAAAAACGACTCGCGGATGAACTCGTTCGAACA
Q8XW54_RALSO/16-338 gcgCTGCTGGGCGATATTCGGGCACTGATCGAGGCGTCGCGCCAGCGCGCCGCCTCGGCGGTCAATGCTGAACTGACCTTGCTGTTCTGGCGCATCGGCCAGCGCATCCATACGGCGGTGCTGGCCGGGCAG---CGGGCCGGGTACGGCGAGGAAATCCTGCCGACCCTTGCCGAGCAGCTTGTCCGCGACTATGGG------CGCAGCTTCGCGGACAAGAACCTGCGCCGGATGGTGCAGTTCGCCGCCACCTACCCGGACGAACCAATTGTCGTGACGCTGTCACGACAATTGAGCTGG---------------TCGCATTTCCTGGCGCTGCTGCCGCTGAAAGACCCGCTCCAGCGGGACTACTACGCGCAGATGGCGAGTGCCGAACGCTGGAGCGTGCGGACGCTGCGCGGGCGCATCGACTCGATGCTGTACGAGCGCACGGCGCTGTCCCAAAAGCCGGAGGAAACCATCGCGCAGGAGCTGGCGATCCTGCGCGATGCGCAGCGCATGACGCCGGCGCTGGTCATGCGCGACCCGTACATCCTCGATTTCCTGGGCCTGCGGGATAGC------TGGCAGGAAAGCGACCTTGAGGCGGCCGTCATCCGCGAAATGGAATCCTTCCTGCTGGAGCTGGGTGCGGGTTTTTCCTTCGTCGCCCGGCAGAAGCGCATCCCGATTGACGACGAGGATTTCCACCTAGACCTGCTCTTCTACAACCGCAAACTGCGTCGGCTGGTGGCCGTCGAATTGAAGATCGGCGAGTTCAAGGCGGCGTACAAAGTGCAGATGGAGCTTTACTTACGCTGGCTGGACAAGCACGAGAGGGAGCCAGAGGAAGCCCCGCCGCTGGGGATCATTCTTTGCACCGGCAAGAAGCGCGAGCAGATCGAATTG---CTGGAGCTGGACAAGTCGGGCATCCACGTTGCCGAGTACCTGACCAGCTTGCCGCCGCGTGCGGTGCTTGGGGAGAAGTTGCAGCAGGCG
Q8TN81_METAC/17-339 ctgCTGCTGGAAGATATTCGTCATATGATCGAAGCGACTCGCTCTGCAGTGGCTACTACCGTTAACGCCGGGCTGACAACACTCTACTGGAATATCGGCAAACGCATCCATGAGGAGATCCTCAAAGGTGAA---CGAGCAGAATACGGGCAGGAAATTGTCGCCTCACTGGGTCGAGAATTGGCAACTGAATACGGC------AATGGATTTTCAGAGAAAAACCTGCGCCGGATGATCCAATTTGCTGAGGTATTCCCTGAGGAGAAAATTGTCGCCGCACTGAGGCGACAATTAAGCTGG---------------ACTCATTTCAAGACGCTTATTCCTATCGAAGATCTCCTCAAACGCGACTTTTATGCCGAAATGTGTCGGGTCGAACGCTGGAGCACTCGAACACTGCAAGAAAGAATAGATTCCATGCTGTATGAGCGCACAGCCATTTCACGCAAGCCTGAAGAAGTGATCCGTCATGAACTTGCCAACCTGAGAGAGCAGGACCAATTAACGCCTGAACTTGTTTTCCGGGACCCCCATGTCCTCGACTTCCTCGGCCTGAAAGACCTT------TATCTGGAAAAGGACCTGGAAGATGCCATCCTGCGTGAACTTGAGTTTTTTCTGCTGGAACTTGGTGTCGGATCCGCCTTTGTAGCTCGGCAGCGGCGCACCCAGATTGACGACGAAGATTTTTACATTGACTCCCTTTTCTACCACCGTTCCTTGCACAGGCTTATAGCTACTGACCTAAAGTTTGGAAATTTCAGAGCCGAATTCAAAGGCCAGATGGAACTCTACCTGCGCTGGCTGGACAAATATGAAAGGCAACCGGGAGAAGAGTCCCCGCTCGGAATCATTCTCTGCGCCGGAAAGAAAGAAGAACAAATAGAACTT---CTGGAACTGAACCGTTTCGGAATACATGTGGCTGAATATCTGACTGAACTGCTGCCCCGTGAACTGCTGGCTGAAAGGCTACAGCATGCT