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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF06228 - DUF1008)
Protein of unknown function (DUF1008)
(
Pfam
reference: accession no.
PF06228
)
(
Interpro
reference: accession no.
IPR010413
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
9 sequences @ 142 aa
(ave. pairwise identity: 0.43)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 4.30)
nucleotides
(available for above)
9 sequences @ 426 bp
(ave. pairwise identity: 0.50)
New Hampshire format
(total tree length: 3.60)
amino acids, restricted set
(corresp. to available nt seqs)
9 sequences @ 142 aa
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 4.30)