EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06214 - SLAM)
Signaling lymphocytic activation molecule (SLAM) protein
(Pfam reference: accession no. PF06214)
(Interpro reference: accession no. IPR010407)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 128 aa
(ave. pairwise identity: 0.59)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.23)
nucleotides
(available for above)
4 sequences @ 384 bp
(ave. pairwise identity: 0.72)
New Hampshire format
(total tree length: 43.02)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 128 aa
(ave. pairwise identity: 0.59)
New Hampshire format
(total tree length: 1.23)