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Pfam
pandit
PANDIT
P
rotein and
A
ssociated
N
ucleotide
D
omains with
I
nferred
T
rees
(View raw data for PF06201 - DUF1000)
Domain of Unknown Function (DUF1000)
(
Pfam
reference: accession no.
PF06201
)
(
Interpro
reference: accession no.
IPR010400
)
sequences
alignment
phylogeny
amino acids
(Pfam-A seed alignment)
13 sequences @ 185 aa
(ave. pairwise identity: 0.34)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 7.75)
nucleotides
(available for above)
12 sequences @ 555 bp
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 5.78)
amino acids, restricted set
(corresp. to available nt seqs)
12 sequences @ 185 aa
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 7.54)