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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06114 phylogeny
for restricted amino acid alignment


 
(((((((((Q8YM10_ANASP/170-299,(Q8FSK5_COREF/193-317,(((O06581_MYCTU/199-322,(((Q8U9Y8_AGRT5/188-310,Q92TQ4_RHIME/207-329),Q8YHJ6_BRUME/188-310),(Q8PMW4_XANAC/190-312,(((Q92RX5_RHIME/190-314,(Q8UHS1_AGRT5/190-314,(Q8YIN3_BRUME/142-266,Q988Z3_RHILO/222-346))),(Q89SE6_BRAJA/193-317,Q9A7G0_CAUCR/164-288)),Q8NSH5_CORGL/164-287)))),Q93J63_STRCO/184-304),O53750_MYCTU/187-310))),((Q8YGE1_BRUME/240-402,(Q935U3_STRTR/39-159,(Q87XD0_PSESM/158-283,(((((Q8FQB1_COREF/162-276,Q9JXJ6_NEIMB/148-274),Q9X8B2_STRCO/172-292),O53463_MYCTU/153-265),(Q89E67_BRAJA/157-271,(Q88VP0_LACPL/161-284,(Q8DNN0_STRR6/157-279,Q99X68_STAAM/169-294)))),(O06177_MYCTU/189-325,((Q8XUD9_RALSO/164-291,(Q88AV8_PSESM/167-297,Q8KAB3_CHLTE/164-299)),(Q9PG06_XYLFA/177-306,Q8P6K2_XANCP/190-323))))))),(((Q9RXY7_DEIRA/75-199,(Q8PMD5_XANAC/33-165,(Q89Y86_BRAJA/33-171,Q8DF32_VIBVU/46-171))),Q89TV6_BRAJA/45-175),(Q8YF44_BRUME/46-170,Q9G094_9VIRU/32-170)))),(O50997_BORBU/37-165,Q8NVY7_STAAW/47-152)),(Q8ZS26_ANASP/49-185,(Q893G5_CLOTE/30-140,(P96630_BACSU/30-151,(Q97LL0_CLOAB/24-144,((Q92B05_LISIN/27-140,Q9K723_BACHD/25-142),((Q8RHG8_FUSNN/29-137,Q8R891_THETN/30-148),(Q92CD9_LISIN/23-138,YIM2_BPPH1/32-150)))))))),(Q8YVK0_ANASP/31-173,((Q87QR6_VIBPA/36-176,Q93P69_9SPHI/215-342),(((Q8ETQ2_OCEIH/31-135,(XKDA_BACSU/33-148,YQAB_BACSU/33-148)),Q9KDC6_BACHD/10-121),(Q93MB1_CLOPE/179-303,(Q88UM1_LACPL/14-125,O03904_9CAUD/25-141)))))),((Q8DW56_STRMU/10-132,Q8E6T7_STRA3/10-132),(Q38182_9CAUD/8-131,((Q938N7_9CAUD/8-119,Q8P2J1_STRP3/9-120),((Q8DXG8_STRA5/9-120,Q94M76_9CAUD/7-118),((O34034_9CAUD/7-117,Q8K6G2_STRP3/8-118),O21992_9CAUD/7-113)))))),((Q9T189_BPA18/10-124,Q8YAK5_LISMO/7-121),Q8W5Y1_9CAUD/1-102)),(Q8SBN1_9CAUD/11-123,Q896D8_CLOTE/10-123)),Q932C0_STAAM/9-123,Q9B0H5_9CAUD/9-123);
(((((((((Q8YM10_ANASP/170-299:0.98372,(Q8FSK5_COREF/193-317:0.53661,(((O06581_MYCTU/199-322:0.48053,(((Q8U9Y8_AGRT5/188-310:0.38677,Q92TQ4_RHIME/207-329:0.20657):0.12707,Q8YHJ6_BRUME/188-310:0.25764):0.38427,(Q8PMW4_XANAC/190-312:0.40563,(((Q92RX5_RHIME/190-314:0.13147,(Q8UHS1_AGRT5/190-314:0.15831,(Q8YIN3_BRUME/142-266:0.13340,Q988Z3_RHILO/222-346:0.11809):0.12922):0.12642):0.49854,(Q89SE6_BRAJA/193-317:0.26374,Q9A7G0_CAUCR/164-288:0.64804):0.22119):0.16372,Q8NSH5_CORGL/164-287:0.60429):0.16398):0.09846):0.11183):0.14546,Q93J63_STRCO/184-304:0.41961):0.19713,O53750_MYCTU/187-310:0.35936):0.11402):1.24958):0.30079,((Q8YGE1_BRUME/240-402:1.04399,(Q935U3_STRTR/39-159:0.91311,(Q87XD0_PSESM/158-283:1.17032,(((((Q8FQB1_COREF/162-276:0.80494,Q9JXJ6_NEIMB/148-274:0.54608):0.15587,Q9X8B2_STRCO/172-292:0.98349):0.19124,O53463_MYCTU/153-265:0.49406):0.10340,(Q89E67_BRAJA/157-271:0.78969,(Q88VP0_LACPL/161-284:0.54093,(Q8DNN0_STRR6/157-279:0.52087,Q99X68_STAAM/169-294:0.33847):0.48099):0.15595):0.22673):0.26171,(O06177_MYCTU/189-325:0.87787,((Q8XUD9_RALSO/164-291:0.51822,(Q88AV8_PSESM/167-297:0.37343,Q8KAB3_CHLTE/164-299:0.56289):0.11997):0.43506,(Q9PG06_XYLFA/177-306:0.50200,Q8P6K2_XANCP/190-323:0.43595):0.35370):0.05701):0.28288):0.11873):0.03264):0.16313):0.12399,(((Q9RXY7_DEIRA/75-199:1.07022,(Q8PMD5_XANAC/33-165:1.19204,(Q89Y86_BRAJA/33-171:0.77381,Q8DF32_VIBVU/46-171:0.53108):0.19115):0.09811):0.08619,Q89TV6_BRAJA/45-175:1.14230):0.22326,(Q8YF44_BRUME/46-170:1.05621,Q9G094_9VIRU/32-170:0.72156):0.31744):0.05487):0.09566):0.07256,(O50997_BORBU/37-165:0.78657,Q8NVY7_STAAW/47-152:0.78864):0.26632):0.06712,(Q8ZS26_ANASP/49-185:1.22334,(Q893G5_CLOTE/30-140:1.06717,(P96630_BACSU/30-151:0.88700,(Q97LL0_CLOAB/24-144:1.20702,((Q92B05_LISIN/27-140:0.75899,Q9K723_BACHD/25-142:0.48751):0.17886,((Q8RHG8_FUSNN/29-137:1.07288,Q8R891_THETN/30-148:0.34819):0.34833,(Q92CD9_LISIN/23-138:0.60148,YIM2_BPPH1/32-150:0.37144):0.20260):0.13073):0.21050):0.16745):0.17942):0.08485):0.09520):0.12204,(Q8YVK0_ANASP/31-173:1.56238,((Q87QR6_VIBPA/36-176:1.21192,Q93P69_9SPHI/215-342:1.10166):0.24636,(((Q8ETQ2_OCEIH/31-135:0.47198,(XKDA_BACSU/33-148:0.25290,YQAB_BACSU/33-148:0.71060):0.18633):0.50468,Q9KDC6_BACHD/10-121:1.14582):0.33643,(Q93MB1_CLOPE/179-303:1.44597,(Q88UM1_LACPL/14-125:0.87417,O03904_9CAUD/25-141:1.35985):0.39063):0.04835):0.16600):0.08018):0.19483):0.42824,((Q8DW56_STRMU/10-132:0.22994,Q8E6T7_STRA3/10-132:0.38637):0.94450,(Q38182_9CAUD/8-131:0.98927,((Q938N7_9CAUD/8-119:0.23731,Q8P2J1_STRP3/9-120:0.26740):0.18016,((Q8DXG8_STRA5/9-120:0.20300,Q94M76_9CAUD/7-118:0.47005):0.21013,((O34034_9CAUD/7-117:0.29197,Q8K6G2_STRP3/8-118:0.16430):0.46869,O21992_9CAUD/7-113:0.25934):0.24022):0.15352):0.20623):0.48269):0.59062):0.80826,((Q9T189_BPA18/10-124:0.79566,Q8YAK5_LISMO/7-121:0.29279):0.23983,Q8W5Y1_9CAUD/1-102:0.30099):0.10902):0.19772,(Q8SBN1_9CAUD/11-123:0.71477,Q896D8_CLOTE/10-123:0.39111):0.23620):0.47081,Q932C0_STAAM/9-123:0.15907,Q9B0H5_9CAUD/9-123:0.20831);