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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06114 phylogeny
for nucleotide alignment


 
((((((((((Q8ETQ2_OCEIH/31-135,XKDA_BACSU/33-148),YQAB_BACSU/33-148),Q9KDC6_BACHD/10-121),(Q8RHG8_FUSNN/29-137,O03904_9CAUD/25-141)),((Q8R891_THETN/30-148,(YIM2_BPPH1/32-150,Q9K723_BACHD/25-142)),(O50997_BORBU/37-165,((Q92B05_LISIN/27-140,P96630_BACSU/30-151),((Q88UM1_LACPL/14-125,Q97LL0_CLOAB/24-144),(Q8NVY7_STAAW/47-152,(Q893G5_CLOTE/30-140,Q92CD9_LISIN/23-138))))))),(Q8ZS26_ANASP/49-185,((((Q9G094_9VIRU/32-170,Q8YGE1_BRUME/240-402),Q935U3_STRTR/39-159),(Q8YM10_ANASP/170-299,((Q8YVK0_ANASP/31-173,Q8YF44_BRUME/46-170),((Q87QR6_VIBPA/36-176,Q93P69_9SPHI/215-342),((Q8PMD5_XANAC/33-165,((((((Q9X8B2_STRCO/172-292,O53463_MYCTU/153-265),(Q89E67_BRAJA/157-271,Q8FQB1_COREF/162-276)),(((Q9PG06_XYLFA/177-306,Q8P6K2_XANCP/190-323),(Q8KAB3_CHLTE/164-299,(Q88AV8_PSESM/167-297,Q8XUD9_RALSO/164-291))),O06177_MYCTU/189-325)),((((Q8YHJ6_BRUME/188-310,(Q8U9Y8_AGRT5/188-310,Q92TQ4_RHIME/207-329)),((((O53750_MYCTU/187-310,Q8FSK5_COREF/193-317),O06581_MYCTU/199-322),Q93J63_STRCO/184-304),(Q8PMW4_XANAC/190-312,Q8NSH5_CORGL/164-287))),(Q89SE6_BRAJA/193-317,((((Q8YIN3_BRUME/142-266,Q988Z3_RHILO/222-346),Q8UHS1_AGRT5/190-314),Q92RX5_RHIME/190-314),Q9A7G0_CAUCR/164-288))),Q9RXY7_DEIRA/75-199)),(Q8DF32_VIBVU/46-171,Q89Y86_BRAJA/33-171)),Q89TV6_BRAJA/45-175)),Q87XD0_PSESM/158-283))))),((Q88VP0_LACPL/161-284,(Q8DNN0_STRR6/157-279,Q99X68_STAAM/169-294)),Q9JXJ6_NEIMB/148-274)))),(((Q8DW56_STRMU/10-132,Q8E6T7_STRA3/10-132),(Q38182_9CAUD/8-131,((Q938N7_9CAUD/8-119,Q8P2J1_STRP3/9-120),((O21992_9CAUD/7-113,(O34034_9CAUD/7-117,Q8K6G2_STRP3/8-118)),(Q8DXG8_STRA5/9-120,Q94M76_9CAUD/7-118))))),Q93MB1_CLOPE/179-303)),(Q8SBN1_9CAUD/11-123,Q896D8_CLOTE/10-123)),((Q9T189_BPA18/10-124,Q8YAK5_LISMO/7-121),Q8W5Y1_9CAUD/1-102)),Q932C0_STAAM/9-123,Q9B0H5_9CAUD/9-123);
((((((((((Q8ETQ2_OCEIH/31-135:0.45604,XKDA_BACSU/33-148:0.35477):0.07850,YQAB_BACSU/33-148:0.34416):0.33628,Q9KDC6_BACHD/10-121:0.49429):0.27111,(Q8RHG8_FUSNN/29-137:0.44410,O03904_9CAUD/25-141:0.82582):0.07069):0.08780,((Q8R891_THETN/30-148:0.36938,(YIM2_BPPH1/32-150:0.32750,Q9K723_BACHD/25-142:0.49784):0.12612):0.12940,(O50997_BORBU/37-165:0.55786,((Q92B05_LISIN/27-140:0.47150,P96630_BACSU/30-151:0.54807):0.13996,((Q88UM1_LACPL/14-125:0.76006,Q97LL0_CLOAB/24-144:0.43049):0.12277,(Q8NVY7_STAAW/47-152:0.58212,(Q893G5_CLOTE/30-140:0.53253,Q92CD9_LISIN/23-138:0.38114):0.01787):0.06244):0.08647):0.04940):0.07580):0.06587):0.05200,(Q8ZS26_ANASP/49-185:0.68095,((((Q9G094_9VIRU/32-170:0.46072,Q8YGE1_BRUME/240-402:0.72190):0.08536,Q935U3_STRTR/39-159:0.50976):0.08896,(Q8YM10_ANASP/170-299:0.59468,((Q8YVK0_ANASP/31-173:0.81468,Q8YF44_BRUME/46-170:0.45121):0.22696,((Q87QR6_VIBPA/36-176:0.65971,Q93P69_9SPHI/215-342:0.62331):0.19599,((Q8PMD5_XANAC/33-165:0.72901,((((((Q9X8B2_STRCO/172-292:0.57898,O53463_MYCTU/153-265:0.35140):0.04506,(Q89E67_BRAJA/157-271:0.50660,Q8FQB1_COREF/162-276:0.47734):0.09250):0.14161,(((Q9PG06_XYLFA/177-306:0.49067,Q8P6K2_XANCP/190-323:0.34028):0.15683,(Q8KAB3_CHLTE/164-299:0.29179,(Q88AV8_PSESM/167-297:0.24372,Q8XUD9_RALSO/164-291:0.54075):0.15172):0.33267):0.07833,O06177_MYCTU/189-325:0.37053):0.18303):0.07595,((((Q8YHJ6_BRUME/188-310:0.30349,(Q8U9Y8_AGRT5/188-310:0.27706,Q92TQ4_RHIME/207-329:0.19979):0.05779):0.19480,((((O53750_MYCTU/187-310:0.24849,Q8FSK5_COREF/193-317:0.30731):0.09191,O06581_MYCTU/199-322:0.32431):0.06009,Q93J63_STRCO/184-304:0.27575):0.03281,(Q8PMW4_XANAC/190-312:0.20585,Q8NSH5_CORGL/164-287:0.56520):0.11971):0.06178):0.06013,(Q89SE6_BRAJA/193-317:0.24747,((((Q8YIN3_BRUME/142-266:0.17381,Q988Z3_RHILO/222-346:0.11222):0.09921,Q8UHS1_AGRT5/190-314:0.20432):0.06364,Q92RX5_RHIME/190-314:0.15228):0.24975,Q9A7G0_CAUCR/164-288:0.31334):0.09036):0.08059):0.40570,Q9RXY7_DEIRA/75-199:0.40839):0.04109):0.08109,(Q8DF32_VIBVU/46-171:0.72314,Q89Y86_BRAJA/33-171:0.26988):0.18585):0.14463,Q89TV6_BRAJA/45-175:0.56102):0.09305):0.17257,Q87XD0_PSESM/158-283:0.64756):0.17885):0.05513):0.17878):0.07859):0.07014,((Q88VP0_LACPL/161-284:0.37136,(Q8DNN0_STRR6/157-279:0.42831,Q99X68_STAAM/169-294:0.30744):0.16486):0.17799,Q9JXJ6_NEIMB/148-274:0.47702):0.11077):0.05373):0.13786):0.04899,(((Q8DW56_STRMU/10-132:0.24695,Q8E6T7_STRA3/10-132:0.29618):0.33691,(Q38182_9CAUD/8-131:0.45002,((Q938N7_9CAUD/8-119:0.25527,Q8P2J1_STRP3/9-120:0.19999):0.14409,((O21992_9CAUD/7-113:0.34077,(O34034_9CAUD/7-117:0.26277,Q8K6G2_STRP3/8-118:0.19530):0.27090):0.11298,(Q8DXG8_STRA5/9-120:0.23735,Q94M76_9CAUD/7-118:0.27144):0.19221):0.07519):0.15912):0.24024):0.11139,Q93MB1_CLOPE/179-303:0.70168):0.11866):0.32419,(Q8SBN1_9CAUD/11-123:0.36941,Q896D8_CLOTE/10-123:0.34496):0.10328):0.04974,((Q9T189_BPA18/10-124:0.51217,Q8YAK5_LISMO/7-121:0.25480):0.12397,Q8W5Y1_9CAUD/1-102:0.27090):0.07771):0.38396,Q932C0_STAAM/9-123:0.21088,Q9B0H5_9CAUD/9-123:0.18246);