EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06088 alignment
(11 sequences with 762 bp)


Q9YMN7_NPVLD/34-223 ATGGCCGCTAACAGCAGCGACACGGTCAACATCGCGGCGTACGTGACCCTTGACAAGGAGGAATTTCGACAC---------ACTCTATCTTTTATTGTTCAAGATGAATATCACTTAAAAAAACTAACGGTCGGCGCGTACAACATCAACGTTCTCGACACC---------------CGCCTGCTCGACGGGCTCTTGGAGAAGCGCTGCTACACCATCGTGTGCGGCAACTACAACGTGATTTACAACTTCACGCAGGAGAAA------ACGCTGCGCGTCATACTGTTCAACGCGTCGCCGATCGTTTTGAAGAAGCATTCGTGCATTTTCAAAATT---------------------------------GTGGTTCCGTCTAATAAGATGCGGGAGTCGTCTCCGCAGCCGTGTCGGATCTTGCAAGAAAACGACGAGAACGACTCGGACGAGCCGCAGGCCGTCTCGCAC---------------------.....................---GGAGATTCGAACGCGGACAGCGGCTCGCGCAGCGAAGAAGACGACGATGCAGCGGGC---------......................................................---------------------GGAGCGGACGGAGCGGGCGGAGCGGGCGGAGCGGCAATCGACTCCGAAGACGAGTTGCCTGCACCGTTTAAGAAACAAAGACTCGACGACGTTGAATCGAAT
Q9J859_9NUCL/1-194 ATGGCCACCAACAACAGCGGCACCATCGACATTTCTGTTCACGTTACTTTGGACAAAGAAGCAAAA---AGAAATGTT------CTTTCGTTTATTGTTCGAGAAGAATATCACTTAAAAAAACTAGCCGTCGGCGCTTACAACATCACTATTCTAGATACA---------------CAGCTGCTCAACAGTCTGCAGCAGCACAGATGCAATACGATCGCTTGCGGCGACTACGTGGTCGTGTACAATTTCGTCGACAACAGCAAT---AAAATCAACGTCATACTATTTAACATTAAACCGACTATATTGAAAAAGGGCAATTGTATATTTAAAATAGTATACGATCATGATGATGAAAATATCGTC------------------AATGCTAATACTACTGATAAGATGTTAGCCGAGCCGGTCGCG---CATCAAGAACAACATGCCAACAGTCAATTGTTCAAATCTGCGTTTGCTCCAGGCTCCGACGAC.....................AGTGACAACGGATCAGCATTATCCGAAGACGACCGAGACGACGACGACGACGACGACGATCGA------......................................................---------------------------------------------------AACGGATCGGAAAACCAATTGTCTGGCGTTGTCCCAGCTAAACGACAAAAACTTGACGACTCTATCTCGGGT
Q8JM51_9NUCL/1-193 ATGGCCACCAACAACAGCAACACTGTCGACATTTCTGTTCACGTAACTCTGGACAAAGAGGCAAAC---AAAAATATC------CTCTCGTTTATAGTTAGGGAAGAATATCACTTAAAAAAACTAGCCGTCGGCGCCTACAGCCTCAACATACTCGACACG---------------CAGCTGTTAAACGATTTAGCGCAACGCGCGGGCACCACTGTGGCTTGCGGCGATTACGTAATTTGTTATAATTTTACAGAAAATAGCAAC---AAAATTAATGTCATCCTATTCAATATTAAACCGACAGTGCTAAAGAAAGGCGGCTGCATTTTTAAAATT------GTATACGACGACAAATCGTCTACAAACGTTAATAATAATAAAAATATTGTTACATCTGATAAGATGTTAGTCGAGCCGCTTAAAGACTTGAACTCTCACCATGCCGACAGCCAACACTCTCATACCGCCTATGTACCAGAATCCGACGGA.....................TCCAGCAGCAGCAGCAGTTCATCTTCCTCCGACACCGACGACAACGACACAGACACCAACGAA------......................................................---------------------------------------------------------------------TTGTCTGAACCGGTCCCAATTAAACGACAAAAACTTGACGAATCTGACCAGGGT
Q91BE7_NPVST/1-197 ATGACGACAAACAACAACGGTACCGTCGACATAGCTGTTGATGTCAACCTTACCGACGAGAATGAC---AAAAAAGTG------TTGTCTTTTATCGTGCAGGACGAATGTCACTTAAAAAAACTAGCCATCGGAGCGTACGCCATCAACGTGATCGACTCTAATAAAATTTTAAACAAACTGTTGAACGACAATGATCATGTCTTGAACAAGATTGTCGCGTGTGGTGAATTTTTGATCGCTTGCAATGAAAACGAATCGAAC------GGTATCAACGCGATATTGTTTAACAAGAGTTGTGTCACTTTGAAAAAAGGAGTTTGTATTTTTAAGATT------------------------------------------------------------CACTATAAGAAAGCTACGTCGACGGTAACAGAA---------------------------------------------------------------.....................---------GGCACGATTACGACCGACGACGACGACGACGAGGACGACGACGACGACGACGCCGATTACgaaaataattacgaacagtttgaaaaagaagagttgaaacaaaatagcgatcagGATGCAACTATCGTCTCCGAATCAGCAGCAGGAAGAGGATCAGGAGGAGACGTCGACGGACATGATTATGATGATGGTCAACCGCAGTCAAAGAGACGAAAATCCTCTGAAACCCAACAG---
Q8V5S4_9NUCL/14-225 ATGGCGATCAACAGTAACGGGACCGTTGACATTGCAACGTACGTT---GTACAAGATAGAGAGCCTGAAAAAAATATAATCACGCTCTCTTTTGTTGTTCAAGATGAATATCACTTAAAAAAACTGGCCGTCGGCGCGTATTGTGTCAATATATTGGACACT---------------CGTTTGCTGTCCAATTTGCACAATAAACAATGTGCAACAATCGCCTGTGGATATTTCGTGGTAACTTACAATCAAAACGAAACTGGT------GGCATAAACGCTATTCTGTTAAACACAAGACCTACTATTCTCAAAAAAGGTTCATGTCTTTTTAAAATATCCTATTACGATGACAACGATGACAAAACACATTTAATTTCAACGAATAATAAGATGTCGAACGACACGGAACCTACACTTTTGTGTGATAATAACCTTGCGAACGACACC---------------GACACCAATATAGCTAACGAATCCGACGAAttgttcagatccacatttgttGCCGACATCGGCTCGAGCGAAGTTCATTCAAACGATGATGACGACGACGATGATACCGACGTC------......................................................------------------GACAACACCATTGACGGATACGACAACACTGGATCGGCAGACGTTGCATCGACCCTTCAAGAACCTGCAGCTAAGCGACAAAAATTTGACCACTCT---------
TLP20_NPVAC/1-180 ATGGCAAGCATGAGCAACATTACGCCAGACATCATCGTGAACGCCCAAATCAACAGTGAAGAT------GAAAACGTA------CTAGATTTTATAATTGAAGACGAATATTACTTAAAAAAACGGGGCGTTGGCGCCCATATTATCAAGGTGGCTAGCTCG---------------CCGCAACTCAGATTGTTGTACAAAAACGCCTATTCTACAGTGTCGTGCGGCAACTATGGTGTTTTGTGCAATTTGGTGCAAAACGGCGAATATGATCTTAATGCAATAATGTTTAACTGCGCCGAAATAAAGTTGAACAAGGGCCAAATGTTATTTCAAACA------------------------------------------------AAAATTTGGCGGTCCGATAATAGTAAGACGGACGCTGCTGTACACACGTCGTCGCCC---------------------------------------------------.....................------------AAACGCACTGTAGAAACCGAGAATGACGACGACGGAGAGGCCGCCTCCGCC------......................................................GCCGCTATCGATGAGCAAGAAGGAAACGCCGACGTTGTTGGACTCGATTTCGAAGAAAATATCGACGACGGAGACGCTCCAACGCCT---AAGAAACAAAAACTTGACAACGCTAAACAAGAT
O92445_NPVBM/1-181 ATGGCAAACACGAGCAACATTACGCCAGACATCATTGTGAACGCCCAAATCAACAGTGAAGAT------GAAAACGTA------CTAGATTTTATAATTGAAGACGAATATTACTTAAAAAAACGGGGCGTTGGCGCCCATATTATCAAGGTGGCTAGCTCG---------------CAGCAACTTAGATTGTTGTACAAAAACGCCTATTCTGCAGTGTCGTGCGGCAACTATAGTATTTTGTGCAATTTGGTGCAAAACGGCGAATACGATCTTAACGCAATAATGTTTAACTGCGCCGAAATAAAGTTGAACAAGGGCCAAATGTTATTTCAAACA------------------------------------------------AAAATTTATCGGCCCGATAATAATAAGACGGACGCTGCTGTAAACACGTCGTCGCCC---------------------------------------------------.....................------------AAACGCGCCGTAGAAACTGAAAATGACGACGACGACGACGAAGACGACGCA------......................................................GCCTCCGCTATCGATGAGCAAAAAGAAAACACCGACGCTGTTGGAATCGATTTCGAAGAAAATATCGACGACGGAGACGTTTCAGCGCCTAAGAAACAAAAACTTGACAACGCTGAACAAAAT
Q91GH9_NPVEP/1-154 ATGGCCAACACTAACAACACCACGTCGGACATAGTTGTCAATGCGCGTTTTGTTGACACAGACGAA------GATACTATTCTGTTAAAATTTTTCACCGACAAAGAACAGCGCTTAATGAGA---------GGTGCGCACGACGTGCATGTGGTGCCGTCG---------------TCAGAGTTGGAGGCGCTGCACAACGGCGCTTATTCTAAATTTACAAACGGCAATTATACTGTTGATGTTAATTTATTAAAAAACGATCATCGCGCCGTGCAAGTTATGTTGTTTGCCAAAGAAGACAACGTCATATTA---AATGACGTGGTGTTTGAAATA---------------------------------------------------AAGGTGTGGAATAGTAAGAAGCTAGCTGACGCGTCGGTACCGCACCATGGACTTGCCATT---------------------------------------------.....................------TCCGAGGAATACGTTGTCGCCGAACGCCTTGGGGCAGAATCTGGCGACGCACCAACG------......................................................------------------------------------------------------------------------------------TCGCCAAAAAAGCAAAAACTGGACGAGCATGCACAAGAT
TLP20_NPVOP/1-155 ATGGCCAACACGAGCAGCACCACGTCGGACATTGTTGTCAGAGCGCGCGTTTTGATTGCGGACGACGAGGGAACGCTG------TTGGAGTTTGAGGCCGAAAACGAGCACTGCTTAATGAGG---------GGCGCGCACGAGGTGCGCGTGATTGCCTCG---------------CCGGAACTGGACGCGCTGCACAACGGGCCTTACAATGAAATTGCGCTCGGCGACTACACGTTTCACTTTAATCTGGTGGCCGCAAACCGCTTTGGCGCGCAGGTCATGCTGTTT---GCCAAACGGGACGACATAAAGGTGTCCGGCGCCGTGTTCAGGCTG---------------------------------------------------AAGGTGTGGAATAGTAAGAAGCGCGCCGTGGCGCCGCCGCATCATGAACCCGAACCCGTT---------------------------------------------.....................---CCTGCCGAGGAAGGCGCTGTCGCCGACCGCGCTGAACCAGAATCTGGCGACGCACCGCCG------......................................................------------------------------------------------------------------------------------TCGCCCAAAAAGCAAAAACTGGACGAGCGTGAACAAGAT
Q9PYS5_GVXN/1-160 ATGACGACCAGCAACATAGTTGACACGGACAACATTGTGCTGTATCCAATACTAGAAGATAATCGT------------------ATTACCTTGGCAGTAAAGGAAGAATATTTCTTACAGAAAGTGGGTGTGGGCGCGCATCGCGTCACCGTGCTGGAGAGCGAACAGCTT------GACCACTTGCACTACACACAGCATCACATTGTTATGGAACGCTCC---GGTTGT---TTGTTGTTGCACAATTGCTACAGCGAGGGT------GGCATAACGGCAGTTTTAATTGTGACGGAACCTTTTAAAATAACAAAAAATAGTGTCTTGTGTCATGTA---------------------------------------------------GCTTTTACCAACGATAAAAATATGTTGGTACCAGTGGAGGTGCACCGAGCCGAC---------------------------------------------------.....................------------GAGCCGACGGTGGAGAATGAACCAACGCCGGACAGCACTACACCAACAATG------......................................................---------------------------------------------------AACCCCGTGATCAGCATAGAAGTGAAACCGGCACCGAGAAAGCCTTCGGTGTTTGACAAATTTTTGCAAGAA
Q9DVU8_9BACU/1-138 ATGGTGACAAAAATGGTGGAGACGGACATGATCGGCGTGTATCCAGTGTTTCTGGACGACAAA---------------------ATCGATTTTAAAGTGGATAATGAATATCACTTACAGAAACAAGGGAAAGGTGCTTACGCCGTTTCTGTCACCAACAATGATAAAATAAGTCGCGGCACACTG---------------------------ACGGTGGAGAGCGCAGATTATAACGTCGTGTACAACTATCTCAGTTCCGGTGAC---GGCATTAGTGTTTTATTGATAATAAAGAAACCTATATCTTTTAAAGCGCACGATACCGTCTTTAGCATT------------------------------------------------------------------------------------------------------------------------------------------------------------.....................------------TCGTTACCGGTTGAGGAGGTGGTGGTTGAGGAAGACGAGCCCGAAGAGGTG------......................................................------------------------------------------------CAGAGTATGGAGATAAGCAGCAACGAAGAGATTAAGACAAACAAACCTTCTTTGTTTGATAAATACTATGTCGGT