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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF06088 alignment
(11 sequences with 254 aa)


Q9YMN7_NPVLD/34-223 MAANSSDTVNIAAYVTLDKEEFRH---TLSFIVQDEYHLKKLTVGAYNINVLDT-----RLLDGLLEKRCYTIVCGNYNVIYNFTQEK--TLRVILFNASPIVLKKHSCIFKI-----------VVPSNKMRESSPQPCRILQENDENDSDEPQAVSH-------.......-GDSNADSGSRSEEDDDAAG---..................-------GADGAGGAGGAAIDSEDELPAPFKKQRLDDVESN
Q9J859_9NUCL/1-194 MATNNSGTIDISVHVTLDKEAK-RNV--LSFIVREEYHLKKLAVGAYNITILDT-----QLLNSLQQHRCNTIACGDYVVVYNFVDNSN-KINVILFNIKPTILKKGNCIFKIVYDHDDENIV------NANTTDKMLAEPVA-HQEQHANSQLFKSAFAPGSDD.......SDNGSALSEDDRDDDDDDDDR--..................-----------------NGSENQLSGVVPAKRQKLDDSISG
Q8JM51_9NUCL/1-193 MATNNSNTVDISVHVTLDKEAN-KNI--LSFIVREEYHLKKLAVGAYSLNILDT-----QLLNDLAQRAGTTVACGDYVICYNFTENSN-KINVILFNIKPTVLKKGGCIFKI--VYDDKSSTNVNNNKNIVTSDKMLVEPLKDLNSHHADSQHSHTAYVPESDG.......SSSSSSSSSSDTDDNDTDTNE--..................-----------------------LSEPVPIKRQKLDESDQG
Q91BE7_NPVST/1-197 MTTNNNGTVDIAVDVNLTDEND-KKV--LSFIVQDECHLKKLAIGAYAINVIDSNKILNKLLNDNDHVLNKIVACGEFLIACNENESN--GINAILFNKSCVTLKKGVCIFKI--------------------HYKKATSTVTE---------------------.......---GTITTDDDDDEDDDDDDADYennyeqfekeelkqnsdqDATIVSESAAGRGSGGDVDGHDYDDGQPQSKRRKSSETQQ-
Q8V5S4_9NUCL/14-225 MAINSNGTVDIATYV-VQDREPEKNIITLSFVVQDEYHLKKLAVGAYCVNILDT-----RLLSNLHNKQCATIACGYFVVTYNQNETG--GINAILLNTRPTILKKGSCLFKISYYDDNDDKTHLISTNNKMSNDTEPTLLCDNNLANDT-----DTNIANESDElfrstfvADIGSSEVHSNDDDDDDDTDV--..................------DNTIDGYDNTGSADVASTLQEPAAKRQKFDHS---
TLP20_NPVAC/1-180 MASMSNITPDIIVNAQINSED--ENV--LDFIIEDEYYLKKRGVGAHIIKVASS-----PQLRLLYKNAYSTVSCGNYGVLCNLVQNGEYDLNAIMFNCAEIKLNKGQMLFQT----------------KIWRSDNSKTDAAVHTSSP-----------------.......----KRTVETENDDDGEAASA--..................AAIDEQEGNADVVGLDFEENIDDGDAPTP-KKQKLDNAKQD
O92445_NPVBM/1-181 MANTSNITPDIIVNAQINSED--ENV--LDFIIEDEYYLKKRGVGAHIIKVASS-----QQLRLLYKNAYSAVSCGNYSILCNLVQNGEYDLNAIMFNCAEIKLNKGQMLFQT----------------KIYRPDNNKTDAAVNTSSP-----------------.......----KRAVETENDDDDDEDDA--..................ASAIDEQKENTDAVGIDFEENIDDGDVSAPKKQKLDNAEQN
Q91GH9_NPVEP/1-154 MANTNNTTSDIVVNARFVDTDE--DTILLKFFTDKEQRLMR---GAHDVHVVPS-----SELEALHNGAYSKFTNGNYTVDVNLLKNDHRAVQVMLFAKEDNVIL-NDVVFEI-----------------KVWNSKKLADASVPHHGLAI---------------.......--SEEYVVAERLGAESGDAPT--..................----------------------------SPKKQKLDEHAQD
TLP20_NPVOP/1-155 MANTSSTTSDIVVRARVLIADDEGTL--LEFEAENEHCLMR---GAHEVRVIAS-----PELDALHNGPYNEIALGDYTFHFNLVAANRFGAQVMLF-AKRDDIKVSGAVFRL-----------------KVWNSKKRAVAPPHHEPEPV---------------.......-PAEEGAVADRAEPESGDAPP--..................----------------------------SPKKQKLDEREQD
Q9PYS5_GVXN/1-160 MTTSNIVDTDNIVLYPILEDNR------ITLAVKEEYFLQKVGVGAHRVTVLESEQL--DHLHYTQHHIVMERS-GC-LLLHNCYSEG--GITAVLIVTEPFKITKNSVLCHV-----------------AFTNDKNMLVPVEVHRAD-----------------.......----EPTVENEPTPDSTTPTM--..................-----------------NPVISIEVKPAPRKPSVFDKFLQE
Q9DVU8_9BACU/1-138 MVTKMVETDMIGVYPVFLDDK-------IDFKVDNEYHLQKQGKGAYAVSVTNNDKISRGTL---------TVESADYNVVYNYLSSGD-GISVLLIIKKPISFKAHDTVFSI----------------------------------------------------.......----SLPVEEVVVEEDEPEEV--..................----------------QSMEISSNEEIKTNKPSLFDKYYVG