EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06068 - TIP49)
TIP49 C-terminus
(Pfam reference: accession no. PF06068)
(Interpro reference: accession no. IPR010339)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 328 aa
(ave. pairwise identity: 0.48)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 6.54)
nucleotides
(available for above)
17 sequences @ 984 bp
(ave. pairwise identity: 0.52)
New Hampshire format
(total tree length: 6.10)
amino acids, restricted set
(corresp. to available nt seqs)
17 sequences @ 328 aa
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 6.54)