EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF06022 - Cir_Bir_Yir)
Plasmodium variant antigen protein Cir/Yir/Bir
(Pfam reference: accession no. PF06022)
(Interpro reference: accession no. IPR006477)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
7 sequences @ 361 aa
(ave. pairwise identity: 0.48)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 3.23)
nucleotides
(available for above)
4 sequences @ 1083 bp
(ave. pairwise identity: 0.66)
New Hampshire format
(total tree length: 67.41)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 361 aa
(ave. pairwise identity: 0.47)
New Hampshire format
(total tree length: 2.24)