PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam
 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
PF05999 alignment |
| Q9WT60_9BETA/103-514 | TTAGAACGGTTAACTTTTGAGGACGAAACGTCAGCTTTTTATCGACTCCTGACCAAGTGCACCGCTCTGGCGCACTTCTCGATTCTGGAGTACATCGTCGATGGGGAGAAGAGGGATACTATCTCGGCGCATTTCAACCGTCTTTTGGAGTTGTTGGACTCCCTCTTCCTGCAGTTCCTTATGCTGAGG---------AAC---AGGAGTGAGTCCAATACTCTGTTGACCTTGTTCGATATTTTGCCCAATCCCAAGGAGATCTATGGCGACGCGGCGTCTCCGACGAGTGTGCTCTTGAAACACTTTTTGTCCGATTACATCTTTGTCGCGTACGCTTCTTCTTATCGCTTTGTGTCTTCTGTGCTCTGTAGTTGCGATCAGTGC---------CGGGCGTCTCTCTTTCGGATCTAT------------CTGGGT---------------------AAGAAAGAT..................TCCCGGGCCGTGAACATATCTGATATTTCCGAATTC------GATCCAGCTGATCTAATTTTAGGCCAGCTG------------------------------------CACCTCGACGCGCGTGAAGCGGTCGCTCTCCGGGCGGAGATTGACCGAGATCTTGGTTCT---TCTCTT------ATTCTTAACTCTATGGAAAGGCGGCAT---TTGCCCATT---CTTCACGATAAGCAGTTGGGGAGAGGGCATTTCGAACGTAACATCTTGAAGGTGTACTGCAACATCGTTCTGTGTCTGTTTCTGCTGAGACGCGTCAAACAGCGCATCGTAAGTGATCTCACGGCCATTGCTCGTTTCTTCGTAAAAGCGATCTCAGAAATGGAGCGTTGCATCGATACCGTTTCTGGCCTCCACGGTGTCAGGATCAAACTGTTAGTTGTCAGTTCT......CAGTTCGAGATTAAAGATCCCATGCGCGTCCCTCGGTTGTGT......TTTTTCTTTCTTGAGATCGTGACG------ATTCTCGTATCGGGTTATGACAAGGAACGGCATCGCGTTCGTGCG---------------------CTCTTGGAGCATCTG---------TGC---CTAAAAAAGATCTGTCTAGGCGACCTGTGTGCATCCATGCGACTCGCTCGCGAGATAAGGCACGATGTTCTGGAGGGCTTCCTC---------------------------------------------------------------------------...---------................................................................................................---AATACTCTGGAG---------TTATCTTACATGTCGAATCCGGTGAGGTTTTTT---------------------------------------------------------CGTTTTCACGACTGCAATCTTTAC............GGG---...---------------...ACCCAT---------ATGTGGAGTGGGGTGTATCCGAAC---------------------GTCGTTCCTTACGCTGTGGCCGGCGGCGGCTCGTTTGAC------------------------------------------------------------------ATCAGGTTGCAGGAGCACCGGAGACGTCAAAAGCGAATAGTCCTCAGACGTAGGCTTATAAGACGCGTGCAA |
| Q9QJ55_9BETA/103-514 | TTAGAACGGTTAACTTTTGAGGACGAAACGTCAGCTTTTTATCGACTCCTGACCAAGTGCACCGCTCTGGCGCACTTCTCGATTCTGGAGTACATCGTCGATGGGGAGAAGAGGGATACTATCTCGGCGCATTTCAACCGTCTTTTGGAGTTGTTGGACTCCCTCTTCCTGCAGTTCCTTATGCTGAGG---------AAC---AGGAGTGAGTCCAATACTCTGTTGACCTTGTTCGATATTTTGCCCAATCCCAAGGAGATCTATGGCGACGCGGCGTCTCCGACGAGTGTGCTCTTGAAACACTTTTTGTCCGATTACATCTTTGTCGCGTACGCTTCTTCTTATCGCTTTGTGTCTTCTGTGCTCTGTAGTTGCGATCAGTGC---------CGGGCGTCTCTCTTTCGGATCTAT------------CTGGGT---------------------AAGAAAGAT..................TCCCGGGCCGTGAACATATCTGATATTTCCGAATTC------GATCCAGCTGATCTCATTTTAGGCCAGCTG------------------------------------CACCTCGACGCGCGTGAAGCGGTCGCTCTCCGGGCGGAGATTGACCGAGATCTTGGTTCT---TCTCTT------ATTCTTAACTCTATGGAAAGGCGGCAT---TTGCCCATT---CTTCACGATAAGCAGTTGGGGAGAGGGCATTTCGAACGTAACATCTTGAAGGTGTACTGCAACATTGTTCTGTGTCTGTTTCTGCTGAGACGCGTCAAACAGCGCATCGTAAGTGATCTCACGGCCATTGCTCGTTTCTTCGTAAAAGCGATCTCAGAAATGGAGCGTTGCATCGATACCGTTTCTGGCCTCCACGGTGTCAGGATCAAACTGTTAGTTGTCAGTTCT......CAGTTCGAGATTAAAGATCCCATGCGCGTCCCTCGGTTGTGT......TTTTTCTTTCTTGAGATCGTGACG------ATTCTCGTATCGGGTTATGACAAGGAACGGCATCGCGTTCGTGCG---------------------CTCTTGGAGCATCTG---------TGC---CTAAAAAAGATCTGTCTAGGCGACCTGTGTGCATCCATGCGACTCGCTCGCGAGATAAGGCACGATGTTCTGGAGGGCTTCCTC---------------------------------------------------------------------------...---------................................................................................................---AATACTCTGGAG---------TTATCTTACATGTCGAATCCGGTGAGGTTTTTT---------------------------------------------------------CGTTTTCACGACTGCAATCTTTAC............GGG---...---------------...ACCCAT---------ATGTGGAGTGGGGTGTATCCGAAC---------------------GTCGTTCCTTACGCTGTGCGCGGCGGCGGCTCGTTTGAC------------------------------------------------------------------ATCAGGTTGCAGGAGCACCGGAGACGTCAAAAGCGAATAGTCCTCAGACGTAGGCTTATAAGACGCGTGCAA |
| VU4_HHV6U/103-514 | TTAGAACGGTTAACTTTTGAGGACGAAACGTCAGTTTTTTATCGACTCCTGACCAAGTGCACCGCGCTGGCGCACTTCTCGATTCTGGAGTACATCGTCGATGGGGAGAAGAGGGATACTATCTCGGCGCATTTTAACCGTCTTTTGGAGTTGTTGGACTCCCTCTTCCTGCAGTTCCTCATGTTGAGG---------AAC---AGGAGCGAGTCCAATACTCTGTTGACCCTGTTCGATATTTTGCCCAATCCCAAGGAGATCTATGGCGACGCGGCGTCTCCGACGAGTGTGCTCTTGAAACACTTTTTGTCCGATCACATCTTTGTCGCGTACGCTTCTTCTTATCGCTTTGTGTCTTCTGTGCTCTGTAGTTGCGATCAGTGC---------CGGGCGTCTCTCTTTCGGATCTAT------------CTGGGT---------------------AAGAAAGAT..................TCCCGGGCCGTGCACATATCCGATATTTCAGAATTC------GATCCGGCTGATCTCATTTTAGGCCAGCTG------------------------------------CACCTCGACGCGCGTGAGGCGGTCGCTCTCCGGGCGGAGATCGACCGAGATCTCGGCTCT---TCTCTC------ATCCTTAACTCTATGGAAAGGCGGCAT---TTGCCCATT---CTTCATGATAAGCAGTTGGGGAGAGGGCATTTTGAACGTAACATCTTGAAGGTGTACTGCAACATCGTTCTGTGTCTGTTTCTACTGAGACGCGTCAAACAGCGCATCGTGAGTGATCTCACTGCCATTGCTCGTTTCTTCGTAAAAGCGATCTCCGAAATGGAGCGTTGCATCGATACCGTTTCTGGCCTCCGCGGTGTCAGGATCAAACTGTTAGTTGTCAGTTCT......CAGTTCGAGATTAAAGATCCCATGCGCGTCCCTAGGTTGTGT......TTTTTCTTTCTTGAGATCGTGGCG------ATTCTCGTATCGGGTTATGACAAGGAACGGCATCGCGTTCGTGCT---------------------CTCTTAGAGCATCTG---------TGC---CTTAAAAAGATCTGTCTCGGCGACCTGTGTGCATCCATGCGACTCGCTCGCGAGATAAGGCACGACGTCCTGGAGGGCTTCCTC---------------------------------------------------------------------------...---------................................................................................................---AATACTCTGGAG---------TTATCTTACATGTCGAATCCGGTTAGGTTTTTT---------------------------------------------------------CGTTTTCACGACTGCAACCTTTAC............GGG---...---------------...ACCCAT---------ATGTGGAGTGGGGTGTATCCGAAC---------------------GTCGTTCCTTACGCTGTGCGCGGCGGCGGCTCGTTTGAC------------------------------------------------------------------ATCAGGCTGCAGGAGCACCGGAGACGTCAGAAGCGAATAGTCGTCAGACGTAGGCTTATAAGACGCGTGCAG |
| VU4_HHV7J/103-514 | CTTCAAAGTCTAAGGTTTGAAGAGTGCACTTCTCCGTTTTATCGAGTTCTGACTAAAGCTACAGCTTTGGCTCATTTTACAATAGCGGAATATTTTGTAGCTGGAGAAAAGCGCGACACTCTTTCGTCTCACTTTAATCGTTTAATGGAGCTCTTAGATTCATTGTTTTTACAATTTTTTATGCTTAGA---------AAT---CGCTGTGATTCAAATATATTGTTGAGTTTGTTTGAGTTACTTCCAAATCCGAAGGAAATAGCTGGTGAAGTCGTAGCGCCTTCCAATCTCCTATTAAAAAATTTCTTAGACGACAAAATCTTTTTTTCATTCGTGATGAATTATCACTTTGTTGTATCTAATCTTTGTAGTTGCGGGGAATGT---------CGCAAGGCGCTATTTTCTCGTTTT------------TTGAAG---------------------CGGAGAGAA..................AGGGGCGTCCTACATTTGTCCGATATACAGGACTTT------AGTCCACAGGACTTGATTCTCCAGCAATTA------------------------------------CATTTAACTAATGATGAAGCTTTACGCGTTAGAGAGAGTATTGACAAAGATCTCGGCGCG---GAGTTA------ATACTGAAAGCAATGGAATCGAAAACA---TTGCCAATT---CTACATGATGAAATTTTAGGGAATAGTCATCTAGAAAGAAACATTTTAAAGATTTATTGTAATATCATTTTATGTCTTTTCCTGGCGCGCAGAGTAAGAGAACGCATCTCTCGTGATTTGGACAAAATAGCGCGTTTTTTCGCGCAGTCTTTAGTCTTTTTAGAAATAAGGATACTACCTTTTGAAGGAGTTGAAAACGTTTGTAGGAAGTTAGCAGTTTTAGGTAGT......CACTTTAGCAGTCACAATGTGATGTCCATTCCTCGGCACTGT......TCCGCTTTTCTTGAAGTGGCTTCT------ATTCTAGTAGCTTCCTACAGTAAACAGAATCATAGAGTGAGAGCT---------------------CTCCTAGAGCACTTG---------TGT---CAAAAGAAGGTAGCTTTAACTTGTTCGTGCTTTCTTTTACACTTAGCTCGGGAGTTAAGGCACGATATTTTGGAAGGATTTACG---------------------------------------------------------------------------...---------................................................................................................---AATCCTTTAAAG---------CTGCACTACATGGACAATCCAGTGCGTTTTTTT---------------------------------------------------------CGGTGTCAAGATTGCAATTTATAT............GGG---...---------------...ACGCAT---------CTTTGGAGTGGTTTGTTTCCAAAC---------------------GTAGTGCCGCATGCGGTTAGGGGTGGAGGTTCTTTTGAG------------------------------------------------------------------GTTAGGATCTTTGAACACAGGATGCGACAAAGGAGAGTTTCGGTGAGGAAAAGGCTTTTTAAAGAGTCTCAG |
| Q91TR3_TUHV1/137-550 | CTGGCCGCCGTCGACTTCTCGCCCGACGCGTCCGACGAGGTGGCCTGGCTGTCCCGCTTGTGCGCCCTGGGGCACTACGCCACGGCGTATTATCTGCGGCACCGCAAGAAGAAGAACACGCTCGTGGGCTATCTGCGGCTCCTCTGCAAGATCGCCAACTCGATCTTCTCGCAGCTGGTCATCATGCGCTACATGGGCACG---TGTCAGCGGAACGAGAACCTCAAGGCGGTCTTCGACACGCTCAAGAACCCGGTGGACGAGGAGGACGGGCCGAGCTGTTACGAGAGCGACGACCTGTACGAGTTCTACCGGAGCCGG------------------------CTGCCGTTCTACTCCCGGGTGCTCTGCAACTGCGAGGAGTGC------------------------GTCGCGCTGGGCCCGAGCGCCCTGCTG---------------------CGCCGAGTG..................CAGCCGTGCGCGCACCTGCGCGACTGCCCGACGTTC------TACCCG---------------------------------------ATGTACCCGCCGCCGATCGGGCACCTGTCGCCCCTGCAGATCCAGACCGTGCTGGTGGAACTGTCGGAGGACGTGATGCAG---CGGTAC------GTGTACCAGGCCATCGACGGCGGCTAC---CTGCCCCTCAAGCAGACGGTGGAGGAGATGGGCAAGGGCTTTCTGGAGAAGGCCGTGCTCTTCCTGCTGTGCAACGTGACGTTCGTCCTCTTCCTCATGTCCGTCGTCCGGCGGCTGTTGTACTTTGAGCTGCAGCTCTTCCGCCAGCATTTCCACCGGTGGTTCTGGGAACGCAGCTGGCCGGCGTCGCCGCTGGCTTCTCTGTACGAGGAGTTCCGGGCGTCCGTGCACGCGGACGAG......CCGCTGGAGCGGGTGCCGATGCTGCTCCACACGTTTCTGACT......CGGGTGCGGGGCGAGACGCTCGCG------CCGCTGGGCCCCGCCGCCGGCACCAACCGCGCCAAGGTG---------------------------GTGCTGGACCACCTG---------TGTCTCCTCGGCGCCTCGACGGTGTCGCGACCGGCGCCGGGCGTCCGCCTGGCGCAGCAGCTGCGCCACATGATCCTGGCGGAATACGAGGTGGTCAACTTCACCGAGCTGGCG---------------------------------------------------...---------................................................................................................---GCGGGGCCGGAC---------AGCACGGTGTTGAACCGGACGGTCCTCTAC------------------------------------------------------------GCGGTGTCGGGGCAGCTCATGCTG............CGG---...---------------...GCGCCC---------CTGTGGTTCACCGGCTGTCTGACGTCGGGCATGGTGTCGGAGATGGTCGCCGCGGCGGCCCTCCGGCAGCGCTCCTTC------------------------------------------------------------------------GTGGTGTCGGAGGCGCGCGCGCTGCGGAAGCGG---------ATCGCGAAGCGGTTATTGCCGTGGCAGGCC |
| Q9QJ54_9BETA/462-885 | GTGAAAAACTTGAAATTTATGGACAATTTTGATGAGAAGTGGCAGTGCATCACTAAACTGGCTTTTATCGGTCTCTATGCTGGAGCGTCTCTGTTTAACTTCGCG---TCCAAACCTACGCTGGGCTACTGGTGTCGCTATCTATGTGAGTACGCCTCCATGTTATTATTTCAGTTTGAAAGCAAGTTA---------AAA---GAGTTGACAAAGGAATCTACTCGGCAGCTGGGAGGTTATAATCTTTGTCACTGGGGTCAAGAATTGAAGGACTGCTTGGAGAACAAATCCGATGTC------TTCTTCAGATACGATTTCTTTGAGCGTATCGAATCCTGTCTCATCGAGCACTTTATGCTCCTGTGTGGTTGTGTCGAGTGT---------AGG---CGCATGTTTATCATGTATAACAAGAGAGGCAGGAAG---------------------TGTGATTTT..................GGCCACTGTGTCCGAATTCAGTGTTTTCCTATGATA------GGTTCA---------------------------------------ATTCGTCTTCCGGCTTTTCTGCATTTGGGTGAACCCTACAGTGTGAGTCTGTCGAGTCTCATAGCGAAGGATTTAGGGTTG---AGCATG------ATTGAAGGTCAGATAGAGCACAGTAGG---CTGCCTATT---TCGCTA------CAGATCTCTGTCACCCCGGATAAGAAGGCATTGCTAACCTTCTTAACTAACATTGTTTTCATTGTGTTCGTCGTGAACACCCTCTACCGTGTCATAAATGCTGAGTTGGACATATATTACGACCTCTTCACGGAAGAAGTGGGAAAATTGTGTGTGACCATG------------------------------------------------------......------------------------------------------......------------GAGGAAGAAATG------AAGCTGGGGCGGAACGGGTGCCTCGGAGACCTGTGCTACTTTTCT---------------------TCGATGAAACAAATG---------AAA------------GAAATTGTTAGGTGTCCCGGGGAAAAGAGTCAGTTTATCTTAAAGTGTTGGGAAGCTCTGAGAATCGGTTTTTCCGTTCCTGCTTACAAAGACTACGACGAGACTCGGTTCATGGAAATGTTTTTTCTGCATCATCTTCATATAAAACGC...TTCCACGAG................................................................................................CACAATGATCGTGAC---------CTGGTGTCTTCTGATAATCTCATTCCGGGTTTTTTTATCGTTAATACCCATGAAGAGAATTTCTTACAGCGGCTACAACGGGTAGTGTTGCCCGTCGCCGAAGATTATTTAACT............AAC---...---------------...ACCAGG---------TGCATAAACGGG---------------------------------ACTATGGCTTTTTTTTTCAGTGGCTTGAAATATTTTGGGAGTGGTAATCATCGGGGTGTT------------------------------------CAAATAAGTCCCGAGAAAGACGTCAGAGCTATCGGGTATAAATTGGGGTCGTTGGACGTCCTCAGGGATGATTACAAGTAT |
| Q9WT59_9BETA/2-425 | GTGAAAAACTTGAAATTTATGGACAATTTTGATGAGAAGTGGCAGTGCATCACTAAACTGGCTTTTATCGGTCTCTATGCTGGAGCGTCTCTGTTTAACTTCGCG---TCCAAACCTACGCTGGGCTACTGGTGTCGCTATCTATGTGAGTACGCCTCCATGTTATTATTTCAGTTTGAAAGCAAGTTA---------AAA---GAGTTGACAAAGGAATCTACTCGGCAGCTGGGAGGTTATAATCTTTGTCACTGGGGTCAAGAATTGAAGGACTGCTTGGAGAACAAATCCGATGTC------TTCTTCAGATACGATTTCTTTGAGCGTATCGAATCCTGTCTCATCGAGCACTTTATGCTCCTGTGTGGTTGTGTCGAGTGT---------AGG---CGCATGTTTATCATGTATAACAAGAGAGGCAGGAAG---------------------TGTGATTTT..................GGCCACTGTGTCCGAATTCAGTGTTTTCCTATGATA------GGTTCA---------------------------------------ATTCGTCTTCCGGCTTTTCTGCATTTGGGTGAACCCTACAGTGTGAGTCTGTCGAGTCTCATAGCGAAGGATTTAGGGTTG---AGCATG------ATTGAAGGTCAGATAGAGCACAGTAGG---CTGCCTATT---TCGCTA------CAGATCTCTGTCACCCCGGATAAGAAGGCATTGCTAACCTTCTTAACTAACATTGTTTTCATTGTGTTCGTCGTGAACACCCTCTACCGTGTCATAAATGCTGAGTTGGACATATATTACGACCTCTTCACGGAAGAAGTGGGAAAATTGTGTGTGACCATG------------------------------------------------------......------------------------------------------......------------GAGGAAGAAATG------AAGCTGGGGCGGAACGGGTGCCTCGGAGACCTGTGCTACTTTTCT---------------------TCGATGAAACAAATG---------AAA------------GAAATTGTTAGGTGTCCCGGGGAAAAGAGTCAGTTTATCTTAAAGTGTTGGGAAGCTCTGAGAATCGGTTTTTCCGTTCCTGCTTACAAAGACTACGACGAGACTCGGTTCATGGAAATGTTTTTTCTGCATCATCTTCATATAAAACGC...TTCCACGAG................................................................................................CACAATGATCGTGAC---------CTGGTGTCTTCTGATAATCTCATTCCGGGTTTTTTTATCGTTAATACCCATGAAGAGAATTTCTTACAGCGGCTACAACGGGTAGTGTTGCCCGTCGCCGAAGATTATTTAACT............AAC---...---------------...ACCAGG---------TGCATAAACGGG---------------------------------ACTATGGCTTTTTTTTTCAGTGGCTTGAAATATTTTGGGAGTGGTAATCATCGGGGTGTT------------------------------------CAAATAAGTCCCGAGAAAGACGTCAGAGCTATCGGGTATAAATTGGGGTCGTTGGACGTCCTCAGGGATGATTACAAGTAT |
| VU5_HHV6U/2-425 | GTGAAAGACTTAAAATTTATGGACAATTTTAATGAGAAGTGGCAGTGCATCACTAAACTGGCTTTTCTCGGTCTCTATGCCGGAGCGTCTCTGTTTAACTTCACG---TCCAAACCAACGCTGGGCTACTGGTGTCGTTATCTAAGTGAGTATGCCTCCATGTTATTATTTCAGTTTGAAAGCAAGTTA---------AAA---GAGTTGACCAAGGAATCTACTCGGCAACTGGGAGGTTATAATCTTTGTCATTGGGGTCAAGAATTGAAGGACTGCTTGGAAAACAAATCCGATGTT------TTCTTCAGGTACGATTTCTTCGAGCGTATCGAATCCTGTCTTATCGAACACTTTATGCTCCTCTGTGGTTGTGTCGAGTGT---------AGG---CGCATGTTCATCATGTATAACAAGAGAGGTAGGAAG---------------------TTTGATTTT..................GGCCACAGTGTCCGAATCCAGTGTTTTCCTATGATA------GGTTCA---------------------------------------ATTCGCCTTCCGGCTTTTCTGCATCTTGGTGAACCCTACGATGTGAGTCTGTCGAGTCTCATAGCGAAGGATTTAGGGTTG---AGCATG------ATCGAAGGTCAGATAGAGCTCAGTAGG---CTGCCTATT---TCGCTC------CAGATCTCTGTCACTCCGGATAAGAAGGCATTGCTAACCTTCTTAACTAATATTGTCTTCATTGTCTTCGTTGTGAACACCCTCTACCGTGTCATAAATGCTGAGTTGGACATATATTACGACCTCTTCACGGAGGAAGTGGGGAAATTGTGTGTGGCCATG------------------------------------------------------......------------------------------------------......------------GAGGAAGAGATG------AAGCTAGGGCGGAATGGGTGTCTGGGAGACCTGTGTTACTTTTCT---------------------CCGATGAAACAGATG---------AAA------------GAAATTGTTAGGTGTCCCGGGGAAAAGAGTCAGTTTATCTTAAAGTGTTGGGAAGCTCTGAGAATCGGTTTTTCCGTTCCTGCCTACAAAGATTACGATGAGACTCCGTTCATGGAAATGTTTTTTATGCATCATCTTCATATAAAACGC...TTTCACGAG................................................................................................GACAATGATCGTGAC---------CTGGTGTCTTGTGATAATCTCATTCCGGGGTTTTTTATCGTTAATACCGATGGAGAGAATTTCTTACAGCGGCTACAACGGGTAGTGTTGCCCGTCGTCGAAGATTATTTAACT............AAC---...---------------...ACCAGG---------TGCATAAACGGG---------------------------------ACTATGGCTTTTTTTTTCAGTGGCTTGAAATATTTTGGGAGTGGCAATCATCGCGGTTTT------------------------------------CAAATAAGTCCCGAGAAAGACGTCAGAGCTATCGCATATAAATTGGGGTCGTTGGACGTCCTCAGGGATGATTACAAGTAT |
| O56270_9BETA/431-852 | TTGCGCGATTTAAAATTTATGGAAGATTTTGACCCCAAATGGCAGTGCATTACTAAACTTGCAGCTGTAGGGTTCTATTCTGGGGCATCATTGTTTAATTTGGGT---GCTAAGCCTGGAATTGGATACTGGTGTCGCTACCTATGTGAGTACCTTTCTATGTTATTTTTTAAACTAGATGGAAAATTG---------AAG---GAATTGAGTAAAGAATCTAAGCAGAAGTTAGGGGGCTTTAGCTGTGCATTTTGGAGCGAATCTTTTAAGACAGAAATGCAAAACAAAACAGAATCA------TTCTTCAGACGCGATTTTTTTGATCGTTTTCAGTTGTACTTACTTGAGCACTTTTTACTATTTTGTGGTTGCGAAGAATGT---------CGA---TACAATTTTTTCAGGTTTAAAAATGTAGGCACAATG---------------------AAAAAGAAT..................CCTGGCTCTGTCAAATTACATTTCTTTCCAGCTTTG------GGTAAG---------------------------------------ATCGATTTACCTATTTTTCCACATTTATCTGAGAAATATTCT---AATCTTTCTATGTTTGTAGCCAAAGATTTGTGTTTA---AGTTTT------ATTGAGGGGCAGATTGAACATTCCAGG---TTTCCTATC---TCGGTT------ACTGTGGATATGGGTCAGGACAAAAGAAATCTGTTGAATATTCTTAGTAACATTGTGTTTTTGCTTTTCATAATTCAAACTCTTAACAGTGTTTTGTTTACTGAACTGAAAATGTATTATGATGTGTACTTAGATGAATTAAAGAACTTGGAGTCTAGCATG------------------------------------------------------......------------------------------------------......------------GAATGTGAAATG------AAACTGGGCAGTAAGGGTTGTATGAACAATATCGTTTATTTCAAT---------------------ATGTTGAAGCAGGTT---------AAA------------GATATTGTCAGAAACCCTGGCACATCCTCAAACTTTATTTTCAACTGCTTAGAAGTGATAAAGATGAGCTTTGAAATTCCGTATTACAAAAACTATGATGAAACAAACTTCATGGAAAGCTTTTATTTGCATCATCTTTACATCCAAAGG...---CAGCCT................................................................................................GCGAAGCACACGGAC---------TTGGTTGCTGCAAATAATCTAGCACCAGGTTTCTTCATAGTGAATGCTAAGGAAAAGAGCTTCATAGATGTGCTGGAGAGATCGATCGTGAACATCGAAGCTGAATATTTAAGT............AAC---...---------------...ACAAAA---------AACATTAATGGA---------------------------------GCAATGGCACTTTTTTTCAGTGGTCTCAAATATTTTGGAAATTTTGGGAATGGAAATTTC------------------------------------CAGACCAGTCCAGAAAAAGATGTAAGAGCTGTAGGGTATAAGCTGGGGGGTCTTGACAAGATTCAGAATGACTTGTGTTAC |
| VU5_HHV7J/425-846 | TTGCGCGATTTAAAATTTATGGAAGATTTTGACCCCAAATGGCAGTGCATTACTAAACTTGCAGCTGTAGGGTTCTATTCTGGGGCATCATTGTTTAATTTGGGT---GCTAAGCCTGGAATTGGATACTGGTGTCGCTACCTATGTGAGTACCTTTCTATGTTATTTTTTAAACTAGATGGAAAATTG---------AAG---GAATTGAGTAAAGAATCTAAGCAGAAGTTAGGGGGCTTTAGCTGTGCATTTTGGAGCGAATCTTTTAAGACAGAAATGCAAAACAAAACAGAATCA------TTCTTCAGACGCGATTTTTTTGATCGTTTTCAGTTGTACTTACTTGAGCACTTTTTACTATTTTGTGGTTGCGAAGAATGT---------CGA---TACAATTTTTTCAGGTTTAAAAATGTAGGCACAATG---------------------AAAAAGAAT..................CCTGGCTCTGTCAAATTACATTTCTTTCCAGCTTTG------GGTAAG---------------------------------------ATCGATTTACCTATTTTTCCACATTTATCTGAGAAATATTCT---AATCTTTCTATGTTTGTAGCCAAAGATTTGTGTTTA---AGTTTT------ATTGAGGGGCAGATTGAACATTCCAGG---TTTCCTATC---TCGGTT------ACTGTGGATATGGGTCAGGACAAAAGAAATCTGTTGAATATTCTTAGTAACATTGTGTTTTTGCTTTTCATAATTCAAACTCTTAACAGTGTTTTGTTTACTGAACTGAAAATGTATTATGATGTGTACTTAGATGAATTAAAGAACTTGGAGTCTAGCATG------------------------------------------------------......------------------------------------------......------------GAATGTGAAATG------AAACTGGGCAGTAAGGGTTGTATGAACAATATCGTTTATTTCAAT---------------------ATGTTGAAGCAGGTT---------AAA------------GATATTGTCAGAAATCCTGGCACATCCTCAAACTTTATTTTCAACTGCTTAGAAGTGATAAAGATGAGCTTTGAAATTCCGTATTACAAAAACTATGATGAAACAAACTTCATGGAAAGCTTTTATTTGCATCATCTTTACATCCAAAGG...---CAGCCT................................................................................................GCGAAGCACACGGAC---------TTGGTTGCTGCAAATAATCTAGCACCAGGTTTCTTCATAGTGAATGCTAAGGAAAAGAGCTTCATAGATGTGCTGGAGAGATCGATCGTGAACATCGAAGCTGAATATTTAAGT............AAC---...---------------...ACAAAA---------AACATTAATGGA---------------------------------GCAATGGCACTTTTTTTCAGTGGTCTCAAATATTTTGGAAATTTTGGGAATGGAAATTTC------------------------------------CAGACCAGTCCAGAAAAAGATGTAAGAGCTGTAGGGTATAAGCTGGGGGGTCTTGACAAGATTCAGAATGACTTGTGTTAC |
| Q9DWG2_RCMVM/88-561 | ATCGCCGCGATGCAGTTCCGCCCCGAGGCCAACGAGGTCGTCCGGGCCCTGTGTCGCGCCTGCGTGGCCGCGCAGTACGGCGTGTCCATCCTCTTCAGCTACGAC---CACTGCGCGGCCGTCCCCCGCTACCTCCGCTCGCTCGTCCAGGAGCTCGTCGAGCTGAACGACCGCATCCGCCACCTCAGCATCGTGTCCAACCTGCGCGTCGAGGCCGAGGACCTGGGCGTCATCCAGGGCGTGCTGCCCGAGCGCGTCGCCGCCCTGCTCGGGGTG------CCCGCCGCCCACGAGCTC------TTCCTCTCCGACGAGTACTACGACTGCGTCGAGGCGGCCGTCGACGCCATGTTCGACCGCTTTTGCGAGTGCGCCGAGTGCGGCATGCGGCGGTCCGAGCGCATCGTGGCGGTCCGGGCCCGGGCGCTGGGGGACGCGCGCGGCCTGACCGCCCGGCGCGGC..................ATGCTGCGGAAGAAGAGGCGCAAC---CGCTTCTTC------GAGGAGAACGACGTCGCGCTGCCCTTCTGCCCGGAGCTCGGGCGCCTGCGGCTGCCCCGGATCCGACACCTCGACCTCGTCCAGCAGGAGCTCCTGTGCCGCCACATCGGCCGCGATCTCATGTTCGACAGCATGTTCGGCGTGTGCCGCGGGATGTCCCGCATGCGGGGCGTCCCCATC---CCCTTCTGCTCCGCCGAGAAGCTCAACCTGGACCTCGCCTACGTGCTCTACCTCGCCAGCAACTCCTACTTCCTCTGTTTCCTCATCCGGACCGTGCGCGACGTGATGCGGCACGAGGAGCGCGCCTACGGGGAGCTGTGCCTCGGC------------CTGGCCCGCGACGCG------GCCCGGGCGCTGCGGGAGGACGTGGAGGCCCGGGTGGCCGCGGGGGCCgtcccgCCGCGGCGCACCTATTTCGACTTCCTGGACCCCGGGCTCTCGgccgagGAGAAGGACCTCAGCATCGTCGGC------GCCCTGGAGCGGGTCACCTTCCGGGGCTGCCGCGTCGTCGAGCGTCGGGACCCCGACGGGACGTCCGTGGACGAGAGGGTCGGCTGCTTCCGT---CAGGACGCGGCCGTCGTCCTCGGGGCCGCCGCCGCCTATCACGTCCCCCGGGCCCTGCGCGAGCAC---CGCGCCCGGGAGGAG---------------------------------------------CTGCTGGCGCACACCCTGGGCATCCGCCGC...CTGTACGAC................................................................................................GAGCGCGTGCTCGCC---------GAGTTCCACGGCGAGAAGCTGGTCCCCTATCACCTGTGCGTCGGCGGGCACTGGCGGCGGGACGGCTGGGCCGTCCAGGCGCGCAACGTCACGCTGCTCGACGAGGAGATCGTC............GGC---...---------------...GTGCGCGGGGACGACATGTTCGCCGGC------------------------------------------------------CACGTGGACTTCTACGAG---------------CGTTTC------------------------------------GAGGAGGTGGAGGTCATCCGCGAGATCCCCGTCAAGAAGCGG---------ACGTTCATGATGGAGCTGCAGAGGATGTAC |
| Q91TS2_TUHV1/141-624 | CTGAACACGGTCGCGTTCCGCCCGGAGGCGTCGGACGTCGCGCGCCACGTCGCGCGCACCGTCGCCGTCGGACAGTACGCCGTCCAGACCGTCTTCGACTACCGG---AACCCCGGCGGGCTCTCGCACTACCTCCGTTTTCTGTGCGAGTCGGTCCACGCGCTCTACGGCCGCTTGGAACGGATCGGC---------GAC---ACGCTGGACGACCGCGCGCGCTTACTGATCGCCGACCTGCTGCCCCGGGCCGTCTGTCGGCAGCTGGGCTACGCGTACGACCCGGACGACCAGACGTTC---ATCTTCGATCCCCAGTACCTGCACGCCAGCGAACAGGTGCTCCAGATCCTCTACGACCGCCTGTGCGACTGCGAAGAGTGC---------CAGGAGCGGCGCTTCACCGCCGCGGCGGCCGCCACGTCCCTG---------------------CGGCGCGGG..................CCCAAGCGGCGCAAACGCTCGTCCTGGGCGGCGTTC------GAGCGGCGAGACGTCGTGCTCGAGCAGTATCGCGAGCTGGGGGTGCTGCGCCTACCGTGTCTCCGCCACCTGAAACGAGATCAGCAGCTCGAGTTGTGCCAGCAGTTGCGACACGACCTCTGTTTC---CGTCGA---------CGCCAGACGCTGACCGCGCGCGAG---CTGCTGCTC---CCGATCGGGGTGCCGTGCGGACACGGCGTCAGCGACGCCTACGCGCTGTACCTGGCCTCTAATCTCGTCTTCACGCTCTTCTTGGCGCAGACCCTGCACGCCATCGTCCGGATCGAGGCCCGGGCGTACATCGACCTCCTCTCCGGA---------------------------------------------------------CACGCCGACGCCTTGGTCGGGGCG......CTTCGCCGACAGGCGTCGTATCTCCAGCACGGCGGACTGGGC......GACGGGGACGGGAACGACGCGGGT------CCCTCGGGCGGACGGTCCCCGAGCGACGGTCGGAAGCTCGCCAGA---------------------CTGACGCGCCGCCTA---------CGGGGTCTCGACTTCGGGTTCGGTGGCGGCAGCGGGTCCGGAACGGCCTTTTTCACCGCCTTCTGCGACTTCTTGGAGATCGTCGAGAAGTTGCCCGACTACGCCCGGCTGAGCGAGTTTCAGGTCCGCGAAGAACTGTTGGTGCACCACTTTTACCTGGCCCAG...GTCTACGCC................................................................................................GACCCGTCGCCCGAG---------ACGCAGGCCGGGGAGCGGCTGGTCTCGTATTACGTGCAGAACGGCGACGCGTGTTGTCAGGACGCGGCCCGGCTGCGCGCCCTCGTGGTCGATCTGTCCGATCGCGAGCTGTCG............CGA---...---------------...GCGCCG---------CGCGCGGAGCCGAGCTGGGCGTGGACGATCGAACCGACCGAGATCGTCTTTCCGCCGCGCATCCGCGAGGTGACTCATTTCGAAGACCTCTACGTCCGGCGCTATTGGTCGGGAGAGGTGGGCGGCTGGATGCCCCACGGCGAATATACGATCGAGGACGAAGATCGCCGGGTCCAACACGCCCTGGAAGAGACGGCGCGGGCCGCCTATCCCTGGTGGCAC |
| UL27_HCMVA/163-602 | GTGCACGAGGCGCAGTACTTGCCAGAGATCAGTCGTGCCGCCAAACGCATCGCTCTGGCCGTGGCCACGGGGCAATACGTGGTGTGCACGTTGCTCGATTACAAG---ACCTTTGGGACGCGCACCCATTACTTGCGGCAGCTATGCTCGATGACCGAGGAGCTGTACCTGCGCCTGGACGGCACCCTG------TGCCTG---TTTCTGGAGCCCGAGGAGCGCGAACTCATCGGCCGCTGCCTGCCGGCGGCCCTGTGCCGCGGGTTGCCCGTCAAGTACCGGACGCACCGCGCCGCCGTT---TTTTTCCACGCCACGTTTATGGCGCGAGCCGAAGCGGCATTGAAGGACCTCTACGCGGCCTTTTGCGAGTGCGGCGACGGG---------CGC------------GACAACGGCGGTAACCACGACGGTAAC---------------------CACGACGGCaatgaccactcctctttgTCGCCCTCCGCGGTGGCGTCCCACCATTCCCGTTTG------GAGCACGCCGAGCTGAGGCTGGAGCGCAACCGACACCTGGGCGCGTTTCACCTGCCGGCGATCCGCCACCTCACGGCCGGCGACGTGGCCCGCGTCCAGGACAGCGTATCACGTGACCTGGGCTTC---GCCGAC------TGGTCGCAGACGCTGATCGACGACTAC---TTTCTGCTC---CCCGCGGGCTGGGCCTGTGCCAAC---CCGCGTCGCGGCTACGCCATGTACCTGGCCTCTAACGCCGTGCTGGCCCTGCGTATCATTCGGCTGCTGCGCGCCAGTATACGTCACGAGTACACGGCGTGTATACGTATGTTGAGCGGGGACGTGCAGCGGCTCATCAGGCTGTTT------------------------------------------------------......------------------------------------------......------------AAAGGCGAGGCT------GCGCTGCTGCGCAAGGGACTCGCTCAGAACCCCGTGCAACGTCGA---------------------GAACTGTCGCGGTTT---------CGCAAACACGTCCACGATCTGAAGCGCATTCGCTTCACCGAGGACACGTTCGTGGAGACCTTCTGCGACTTTCTCGAGCTGGTGCAGCGGATTCCCGACTACCGCAGCGTGTCGCTGCGCATCAAGCGCGAGCTGCTGTGCCTGCACGTTTTCAAGCTGCGCCGGggcTGTCGCGCG................................................................................................CCGCCGACGCCCGAG---------ACGGCGCGCGTCCAGCGCCTGCTCTGGCAC---TCGCTGCGACACGGGGACGCGCCGCAGGATCGCACGCGGCTGCCGCAGTTCAGCTCGGCGCTCTCGGACGCCGAGCTGAGC............AACCACgccAACCGCTGCCGCCGCaagGCCCCG---------CTGGAACTCGGG------CCCGCC---------------------GTCGTCGCCGCCCCGGGGCCCTCGGTGCGCTAC---------------------------------------------------------------------------------------CGGGCCCACATTCAAAAGTTTGAGCGTCTTCATGTACGCCGTTTTCGGCCTCACGAG |
| Q8QS61_9BETA/165-636 | GTGCACCGCGCCCGCTACCTGCCCGAGATCAGCCGCGCCGCCAAACGCATGGCGCTGGCCGTGGCCACGGGCCAGTACGTGGTCTGTAGTCTCTTGGACTACAAG---TCCTTCGGCACGCGCACCAATTACCTGCGGCAGCTGTGCACGTTGACCGAGGAGCTGTACATGCGGCTGGACGGCACCATG------TGCCTG---TTCCTGGACCCCGAGGAGCGCGAGGTCATCGCGCGCTGCCTGCCGCAGTTCCTGTGCCGCGGCCTGGCGGTGCGGTACCGCTCGCACCGCGCCGCCGTC---TTCTTCAACGCCACCTTCGGCGCCCGGGCCGAGACGGCGCTCAAACGCCTCTACTCGGCCTTCTGCGAGTGCGGCGACTGG---------CGC---GACCCCGATGTGCCGGTCGAGGCGGCGGAGGCGGTG---------------------GCCGCGGCG..................TCCCAGCACGCGCACATGCTGCCGCCGCCCCACTTTCACCTGGAGAACGCCGAGCTGCGCCTGGAGAACAACCGACACCTGGGCGCTTTCCACCTACCGGCCATCCGCCACCTGACGGTGGACGACATCTCCCGTATCCGTGCCAGCGTGTCCCGCGACCTGGGCTTC---GCCGAG------TGGTCGCAGACGCTGGTGGACGATTAC---TTCCTCTTG---CCCACGGGCTGGGCCTGTGCCAAC---CCGCGACGCGGTTACGTGATGTACCTGGCTTCTAACGCCGTGCTGGCGCTGCGCATCATCCGCCTGCTGCACGCCAGCATACGTCACGAACAAACGGCGTGTGTACGCATGCTGTCCGGCGACGTGCAGCGGCTCATCAGGCTGTTT------------------------------------------------------......------------------------------------------......------AAAGGCGAGGCCGCGATGCTGCGCAAGGGACTCGCGCAGAACCCCGTGCAACGCCGGGAACTGTCGCGG---------------------TTCCGCAAGCACGTC---------CACGATCTGAAGCGCGTTCGCTTTACGGTGGACGGC------------TTCGTGGAGAGTTTCTGCGACTTTCTCGACGTGATCCACCGCATCCCCGACTACCGTTGCATCTCGCTGCGCATCAAGCGCGAGTTGCTCTGCCTGCACACGTTCAAGTTGCGCCGC...GTGTACCGGccgccgccgtcgtcgctgttggccggttctcaccataacaacagcgtggtcctcccaccccccaccaccacgaacgcgtcctcgccggcgccgtcgTCGCCCCATCCCGATCCGCAGCTGCTGCTGCGTGCCGAGCGCCTGGCTTGGCACTAC---CTACGGCACGGCGACGTGCCCCAGGACCGCTCTCGCCTGCCGCAGTTCAGCTCGGCCCTCTCGGACGCGGAACTGAGCaacaacgccaacCGC---...---------------...TGCCGT---------CGCAAGGCGCCC---------------------------------GTGGAGTTCGCGGGTTTCGCCGGCGGGCCCTCG------------------------------------------------------------------------GTGCGCTACCGCGCCCACATCCAGCGCTTTGATCGCCTCTATGTGCGACGTTTTCGACCCCACGAGGTCGGA |