EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05990 alignment
(13 sequences with 1005 bp)


Q98NF8_RHILO/35-259 GACGCCCCGCAATTCGCCAAGGCGGTCGGCGCCGACATCGCC---ATGCGCGGCGACCGCGCGCTGGTGTTCGTGCACGGCTTCAACAACGGCTTCGACGACGGCGTCTACCGGCTGACGCAGATCGCCCATGATACGAAA.....................................................................TATCCCGGT------ACGCCGGTGCTGTTCTCCTGGGCGTCGAGCGCCAAG---------ACGACGGGC.......................................TATATCTACGACAAGGAC---...AGCGCCAACGCCGCCCGTGACGACCTCGAGGCGACGCTCAGAATGCTCGCCAAGACG------------------------CGGGTCAAGAGCATCGACATCATCGCTCATTCGATGGGAACCTGGCTGACCATGGAGGCGCTGCGCCAGCTCGCCATCACCGGCGACCGC---------------------------------------------------------GATCTCGGCGGC------AAGCTCGGCTATGTCGTCCTGGCTTCGCCCGACATCGATGTC---GACGTGTTCAAAAAGCAGATGATG---------------------------------CGTTACGGCAAGCCGGAC---------------------------AAGCCGTTTGCCGTGCTGTTGTCAGGCGATGACCGGGCGCTCAAA---TTGTCTTCATTTATCTCCGGCGACAAGCCGCGTGTGGGCGACTACGGCAATGCGGCCGAT------------------CTCGCCAGCTATGGCGTC---...---------TCCGTGGTCGACCTGACCAAGGCCAAGGGCGGCGACGGTGGCCTAAACCACGCGAAATTCGCCGACAATCCGATCCTGGTG------------CAGTTGCTCGGCAACCGG
Q98NF6_RHILO/123-346 ACGCAGCCGAAATTCTCCAGCGCGCTGAACGCCGACATCGCG---GCGCGTGGCGGCCGCGTCATGGTCTTCGTGCACGGCTACAACACCGGTTTCGACGATGCAGTCTACCGCCTGACCCAGATCGTCCACGATTCCGGC.....................................................................TATCCCGGC------ACGCCGGTGCTGTTTTCCTGGGCGTCGGGCGCCAAG---------ACCACCGAC.......................................TATGTCTATGACAAGGAA---...AGTGCCAGCGCGGCACGCGACCAGCTCGAAGTGACGTTGCGCATGCTGCAGCAGTCC------------------------GGCGCGCGTCGCATCGACATTGTCGCGCATTCGATGGGAACCTGGGTAACCATGGAAACGCTCCGCCAGATGGCCATCAGCGGCGACCGC---------------------------------------------------------GACCTCGGCGGC------AAGCTCGGCGACGTGGTGCTCGCCTCGCCCGACATCGATGTC---GACGTGTTCAAGAGCCAGATGCGC---------------------------------CGCTACGGCAAGCCCGAC---------------------------AAGCCGTTCATCCTGCTGTTGTCCGACGACGACCGCGCGCTGAGG---CTTTCCGGCCTGATCGCCGGTTCACGGCCGCGCGTCGGCGACTACAAGGATGCAGCCGAT------------------CTTGCCTCCTATGGCGTG---...---------ACGGTGGTCGATCTCTCCGAGGTCAAGGGCAGCGACAGC---TTCAACCATACCAAATTCGCCGACAATCCGGTCCTGGTG------------AAGATGATCGGCCAGCGG
Q92WL8_RHIME/85-311 TCGGAAGACGAGGCGCGCACCTGGTTCCGCGCCCAT---------AACAAGGACGGCCATGTGCTTCTTTTCGTGCATGGCTTCAACAACCGCTATGAGGACGGCGTCTTCCGGCTGGCCCAGATTGTCCATGATTCCGGT.....................................................................GCGCAGGCG------ACACCTATGCTGTTCACCTGGCCGTCGCGTGCGCGG---------GTGTTCGAC.......................................TATAATTACGACAAGGAG---...AGCACCAACTATTCGCGCACCGCGCTCGAGGATACGCTGCGCACGCTGGCAAATGCC---------------------CCGAACGTCAAGGACGTCACCATCCTTGCCCATTCTATGGGAACCTGGCTGACGATGGAGGCGCTGCGCCAGATGGGAATTCGCGACGGG------------------------------------------------------------AAGATCGCGCCG------AAGATCGAGAACGTGATTCTCGCTTCGCCCGACATCGACCTC---GACGTCTTCGCCAAGCAGTGGACC---------------------------------GATATGGGCGATGAACGG---------------------------CCGAAATTTACGATCTTCGTCTCGCAGGACGACCGGGCGCTGGCG---CTTTCGCGACTGATCTCGGGGGATGTCTCGCGGCTCGGCGCGATCGACCCCAGCGCCGAACCC---TATCGCACGCAGCTAGAGACAGCCGGCATT---...---------ACTGCGATCGACCTCACCAAGGTCGAGACGGATGACGGC---TTGCACCACGGCAAGTTCGCTGAGAGCCCCGAGATCGTG------------CAACTAATCGGGCAGCGG
Q8G2J1_BRUSU/113-340 GGTGATGCTGCCGCGCAGCACTGGATCAACACGCATCTGCCCCGG------ACGAAGCGCGTGATGATCTTTATCCACGGCTTCAACAATACATTCGAGGATTCGGTCTATCGCTTCGCGCAGATCGTGCATGATTCCGGG.....................................................................GCCGATGTT------GCGCCGATCATCTTCACATGGCCCTCGCGCGCCAGT---------GTTTTCGAT.......................................TATAATTACGACAAGGAA---...AGCACGAATTATTCCCGCGATGCGCTGGAACATGTGCTGCGCGTGGTCGCCAACGAT---------------------CCGCAGGTGCGCGACGTCACCATCATGGCCCATTCCATGGGAGCCTGGCTGGCGATGGAGGCGCTGCGCCAGATGGCGATCCGTGACAGG------------------------------------------------------------CGCGTTAATGCC------AAGATCACCGATGTCATTCTGGCTTCGCCCGATATCGATGTA---GATGTGTTCGGCAAACAGTTTCAG---------------------------------GCCATGGGCAGCCATCAT---------------------------CCGCGCTTCACGCTCTTCACCTCGCGTGACGACAAGGCGCTTGCG---TTGTCGCGGCGCATTTCCGGCAATATCGACCGTCTTGGCCAGATCGACCCGTCCGTCGAACCC---TATCGCTCCAAGCTGGAAAAGGCTGGCATC---...---------GTGGTCATTGATCTTACACAGCTCAAGGCGGGTGACAGG---CTGAACCATAGCAAGTTCGCCTCAAGCCCGGAAGTGGTG------------CAACTCATCGGCAGGCGT
Q8UIA1_AGRT5/109-336 TCCGAAGCGGAGACGAAAAGCTGGATCAGCAAACATATCAAGAAG------GACCGCCGCGTGCTGGTCTTCGTACACGGTTTTAATAATCGTTACGAGGAATCCGTCTATCGCTTTGCCCAGATCGTCTATGATTCCGGC.....................................................................TCGGATGTC------GTACCTGTGGTGTTCACCTGGCCGTCGCGAGCCAGT---------ATTTTCGAT.......................................TATAATTACGACAAGGAA---...AGCACCAATTACTCGCGCGATGCGCTTGAGGAAATGTTGACCCGCCTCGCACGAGAC---------------------AAGTCGATCGGTGAGGTCACCGTGATGGCGCATTCCATGGGCACCTGGCTTGCGGTTGAGGCGTTGCGCCAGATGGCGATCCGCAACGGC------------------------------------------------------------CGCGTTGATCCG------AAGATCGGTAATGTCATTCTGGCTGCGCCTGATCTCGATGTG---GATGTGTTCAGCCGGCAGTTCACC---------------------------------AGCCTCGGCAAGACGCCG---------------------------CCTAAATTCACGCTCTTCGTCTCACAGGATGACCGTGCGCTCAGC---CTGTCGCGCCGCATTTCCGGCAATGTCGATCGGCTGGGCCAGATCGACCCATCCGTCGAGCCC---TATCGCAGCCAGCTGGAAAAGGCCGGGATA---...---------ACGGTTCTCGATCTCACCAAGCTGCAATCCGGTGATCGT---CTGAACCACGGTAAATTTGCCGAGAGCCCCGAGGTCGTC------------CGCCTGATCGGCGACCGT
Q92PT3_RHIME/95-324 GATCGCGGTGCGGCGGAGAAATGGTTGAACACGCATGTGCGCAAGAGCCCGGACGGCAGCGTCCTCGTCTTCATCCATGGGTTCAACAACCACTTCGAGGATGCGGTCTTCCGCTTCGCGCAGATCATCCACGACTCGGGC.....................................................................GCGCGCAGC------GTTCCGGTGCTCGCGACGTGGCCGTCGCGCGGGAGC---------CTGCTGGCC.......................................TATGGCTACGATCGCGAA---...AGCACCAACTACACCCGCAACGCAGTAGAACGCCTTTTCCAGTATCTGGCGCGTGAT---------------------CCCGAGGTCAAGGAAGTATCGATCCTGGCACATTCGATGGGCAATTGGTTGGCGCTCGAGTCCCTGCGCCAGATGGCCATTCGCAACGAC------------------------------------------------------------GGCCTGCCGGCG------AAGTTCAGGAATGTCATGTTGGCGGCGCCGGACGTCGACGTC---GACGTCTTCGGATCGCAGATCGCC---------------------------------GACATGGGCAAGCAACGG---------------------------CCGCGCTTTACACTCTTCGTCTCGCGCGACGACCGTGCACTCGCC---GTTTCCCGCCGCGTCTGGGGAAATGTCTCCCGGTTGGGAGCGATCGATCCGGAGCAGTCGCCC---TACAAGGAGGAGTTGGCGGCGAATGGGATC---...---------ACCGTCGTCGACCTCACCAAAATCAAGGCAGGCGACAAT---CTGCATCACACCAAGTTTGCGGAGTCGCCGGAAATCGTA------------CGACTGATCGGCAGCCGC
Q8UJ66_AGRT5/146-374 AGCAAGACAAGTTTCACCACCGATCTCGGCGAT------ATTTCCCGCTCCGGCAAACAGATCGCGCTTTTCGTGCACGGTTATAATTACAGCTATCAGGAAGCACTCTTCCGCGCGGCGCAGATGGCTGCCGATGCAAAT.....................................................................ATGGATGGT------GTACCGCTGGTCTTTTCCTGGCCGTCGCAAGCCAAC---------CTCACCGGT.......................................TATGTGGCCGACAAGGAA---...TCAGCGACCTACTCGCGTGATGCACTGGCCACATTGTTGACCGACCTTACCCGGCAG---------------------ACCCCGCGCAAAAGCATTGTCGTGTTCGGTCACAGCATGGGCGGCTGGCTTGTCATGGAGGCGTTGCGCCAACTGCGCTTCGAGGGCCGAAAT---------------------------------------------------------GACGTTATCGCC------AAGCTG---CAGGTGGTGCTGGCCGCACCCGATATCGATGCC---GATGTCTTCCGCAAGCAGATCGAG---------------------------------GTGGTCGGCAGGCTCAAT---------------------------CCGCCCCTCACAGTCCTGGTCTCCAAGGATGACCGCGCCCTCAAG---GCGTCGTCCATCCTGGGCGCAGACGTGACGCGGATCGGCGCACTGGATGTCGCCGATCCCCAG---GTGCAGGAGGCAGCATTGAAGGAAGGTGTT---...---------CAGTTCGTGGATATTTCCAACCTGAAAGCCTCGGATCCG---CTCAACCATGACCGCTACGCGGCGTTGGCGTCGCTGGTG---------CCGCAGCTGGAGGCAAGCCGG
Q8RPA1_METEX/113-335 GACGTCACGACGGGGTCGGGCGCGGCGGCGGCCTTCGCCCAATCCGCCTTCGGCCGCGACGTGCTGATCTACGTCCACGGCTACCGCGAGAGCTTCGAATCGGCCGCAATCAGCGCCGCCCGCCTCTCCGACGGCATCCGC.....................................................................TTCAATGGG------GCTTCCGCCCTGTTCACATGGCCCTCGGCGGCGGCA---------ACCTTCGAT.......................................TACGGCTACGACCGCGAG---...AGCGCGCTGTGGTCCCGCGACGCGTTCGAGGACCTGTTGAAGACCGTGGCGACCACG---------------------CCGAGCGGCGGGCGCATCCACATCGTCGCCCACTCGATGGGCACGCTCCTCACGCTGGAGACGCTGCGCATGCTGCGGGCCGAGGCCGGCGAG---------------------------------------------------------GCGGCGGTCGCC------CGGATCGGCGCGGTGGTGCTTGCCGCGCCCGACATCGACATC---GACCTGTTCACCAACGGCGTCGAG---------------------------------CGCCTGGGGCCGGACGCC---------------------------AAGCGCATCACCGTCATCTCGGCGACGAACGACCGCGCACTCGAA---CTGTCGGGCGCCATCGCCGGCGGCGTCGTCCGTGCGGGCGCCGCCGAC---------------------CGGGAGCGCCTGGAAGCTCTGGGCGTG---...---------CGCGTGGCCGATGCCTCGGATTAC---GGCGGCGGGCTC---TTCAACCACGATCTGTTCCTGTCGAACCGCGAGGTT---------------CAGGCCGTCGTGAAGCGG
Q8Y163_RALSO/20-246 TCGGCGGAGGCATTCGCTACCACATTGCGCAGCGAGATTCAAATATCCTCGAATAAGAGCATGCTGGTGTTTGTCCATGGCTATAACGTGAGTTTCGCGGACGCGGCACGTCGCACTGCGCAGATGACCTACGACTTGGCG.....................................................................TTTCCTGGC------GTTGCGGTGTTCTTCAGTTGGCCATCGCAAAATCAA---------TTATTGGCA.......................................TACACACTCGATGAACAG---...AGTATCGAATGGGCGCAACCACATTTGGAACATTTTTTGCGCGAACTCTTAAATAAT---------------------TCGAGTGCCGACAACATCTACCTCATTGCCCACAGCATGGGGAACCGCGCACTCACCAAGACACTAGTTTCACTGGCTGGCAGCGAT------------------------------------------------------------CCGCAAGCGGTCCAG------CGCATCAAGGAAGTCATACTGGCTGCCCCCGATGTAGATGCG---GACGTATTCGTCGATCAGATTGCA------------------------------CCTGGATTGGCAAAGCTGGGC---------------------------GCACCGGTCACGCTCTATGCTTCATCCAGTGATCGCGCGCTCATG---ATGTCGAAAAAGGTGCACGGTGGCGCT---AGAGCAGGGGAA---------------------TCTGGAGACCATATTGTCGTGGTCAATGGAATT---...---------GAAACGGTCGATGCATCAAACGCCGACACT---GATTTG---ATTGGACACTCTTACTACGGCGATCGACGGTCGATACTTGCCGACATGTTCTATTTGGTTCGCAATGAC
Q8F7A8_LEPIN/106-340 AAACCGTTCGCAAATCAAGAAAATCTAATCGAAGATCTTAAAAAAGATCCACACGACGAAATACTTGTATTTGTTCATGGGTTTAACGTAAAATTCGAAGAAGCAATTTTGAGAGGAGGACAAATCCGATTTGATCTTAAG.....................................................................TTTCCGGGT------AAAATGATCATATTTACTTGGCCGGCCGGAAACGAA---------GAAGTCGGActagtcagtcaagttttattaaatcaaatattacttaaaAAAACTTATGAAAAAAATCTAtccTCTGCTAAGGCTTCCAAAAAAGAATTTAAGAGTTTTATAAACTATCTACAGAACGCC---------------------------GGAAAAAAAATCCACCTAATTGTTCATTCAATGGGACATCAAGTTGTACTTCCTGCGTTATCCGAAATTGGAAAAGAAACAGATAAACCC------------------------------------------------------------------------TTAATCCAAGAACTGATTCTAAACGCGCCTGACTTTGATTCT---GCGGAATTCAGACTCATTTCAGAT---------------------------------TCTCTAATAAAATCCTCC---------------------------AAAAGAATCACTCTCTATTGTTCTCCCGGAGATAACGCACTTCAA---ATTTCTGCATCCTTAAATCAAGGA---AGTAGACTCGGTTCTTGTGTTCCCATCGAGGGT---------------------------------------...------TTCGATGTGGTGAATGTAAATCCTGTAGATTCTTCCTTAATTTCTATTGGACACGGATATTATTCTTCCAGACCTTTGTTAACGGACATTTATCAGATTCTTTTAGGAGTCAGG
Q92YA4_RHIME/163-429 GCCGCCGCATCGCTGCAGGCCGAAGTCGCTCGTCGGCTCTCAACAAGTGATCGTAAAGAAGTCGTGGTCTTCATTCACGGTTATGGCAACAGCTTCGACGCCGCCGCGCTCACCACAGGCGAGATTTGCAGGTCGCTGCAG.....................................................................AACCAGTTT------GTCTGCATTGTCCTGACATGGCCTGCTGGAGGCTCCGGCGGCTTTTTCTTCGGC.......................................TACAATATCGACCGCGAG---...TCGAGCGAGTTTTCAGTCGCGGATCTTAAGAAAGCCATTCGCATCATCGCCGAAACT---------------------CAGGGGCTCGAGCGGCTTCACCTCTTGGCGCATAGCCGCGGGACCGATGTGCTCGCGAGTGTGGTCCAACAACTCAGCATTGAAGCATATGTTAGCCAA------------------------------------------------TCCTCAATGTGGCAGCGCTACAAGATCGCGAACGTGGTGTTTTTCGCGCCTGATATTGATCTC---GACGTGGCTTCTTCCAAGATGTTCGCGTGGGTATCGGATCCAGACCTTGCCTTCGGCAACAAACCAAGGCCGAGCACGGTCCCGCCTCAAGGCCCT------CTGCATCTCACGGTTTATTCGTCTCCAAGGGACAAAGCGCTGGGG---GCATCAACGCTGCTCTTCGGTAGCGCCTTGCGGCTGGGGCAGCTCGCTGTCGACAGGCTTCCCGAAAACAGGAGCGAAGCGGCGTCCAGATGGGCAGGGtctCAGATGGGTGAGTTAGTCGATTTCATCGAGTTTCCAGGCGGCGGCTTC---ATTGGCCATAGCTACTTCTTGTCCAATCCCGCCGTTAAAGCTGACTTCATTGCGCTTATCCGCGCTAGA
Q987B5_RHILO/77-316 ATTCGCGGAAGCGACCAGATGTTTGCCGCGCTTCATCCGGCATTCAGTGCGGCAAAGACGATCATCCTGTTCGCGCATGGCTTCTTCAACACCTTTTCCGACAGCGTCGAACGTGCGGCGACGATCCTGAGCTTCTACGGA.....................................................................ATAGATGCC------GAGATCATCGTCTTCAGTTGGCCCTCTGCCGGCACA---------TTGATCGGC.......................................TACCAGCATGACCGGGCA---...ACATCACGACAGAGTGGCCCCGCGTTTGCCCGAGTGATCCGCAGGTTGGCGACGGAGCTTGCCGGCCTTGCCCCGACGGCGCCGCGTCCGACCGTTCACCTGCTCTGTCACAGCATGGGAAACTTTGCGCTGCGTTTTGGCGTTCAGGCATTGCTGGCGCAACCGCAAGATACAAAA------------------------CCCGGCGAGGCCCAACCGGCCGTACCGGCGACGCATCTTCCGACCATCTTCAACCAAATCATTCTCGCCGCCGCCGACGAGGATTCC---GATGCGTTCGACCGGCAGGACAAACTG---------------------------AAGGCGCTGCCCGACCTCGGG---------------------------CGTGGGGTTACCGTCTACTACACCCATGAGGATTGGGTGCTGACCTTCTTGAGCGCTGCAATTGAATTCAACGGCCCCCGGCTTGGCGCCGGAGGCCCCGAC---------------AACATGGCAACCATCAGCGACAAGGTG---...---------AGTGCGGTGGACGTGAGCGCCGTTGTTCCAGCCGAACTCAACATGAATAGCCATCAATAT---------------------------------------------TATCGG
Y1448_ANASP/59-338 ATTGAAGATTCTGAGGAGACTGTATTTAACAAGTTTCTCAAAAAAGAGGCCGTAAAACACATTATCATTGGCACTCATGGTTACAATGTTCCTTTTCATGGGGCATTAACTTCTTTTTCGATTTTGGCAGACACCCTTAAGggagccttaaaaaagcataattttactttgattgctgatccagaagaaaagatagatatcgacaactccAACCAAAATTTAATCGCTTTTGTCGGATTTTCCTGGCCTTCCAATGGCAAA---------GTTTTAGAT.......................................TACAATTCGGATCGTACT---...GAGTGTGTACAATCTGCCCCAGCCTTAGCTAATCTGATCAGTTATATTCGCACTAAA---------------------AAACCTGACATTAAAATCTACGTCATAGCTCACAGTATGGGCAGTTACCTTGTTTGCCATATGTTGGAACAGCTAGTTAACCAAGCCTTTGAG------CCAACAGAATTGAATGAGGAGATTAAAAACAGATTAAAACGAAAAGATAGAGGCGGAGAAAATACTTTTTTTGTCGATCGCTATTTTATGTTAGCTCCTGATGTGGAACGTCGGGAAGTGACCAAGTGTGATCTAGGC---------GGATCTGAATATACAGGCCCGTTTTACTCTGGTCTGGAACAC---------------------CTGGTTCAAGAAAGTCATGTATTCTACTCTCGCTACGATAATGCACTAAAA---GCCTCA---GTAGTTGAAAAAGACGCAATTCGT------------------------------------------GAGTCATTGCAGAAAGGATTC---...GAGTTATTCACCGGCCCCGACTTGCAAAAACGTTGGGAGAGCAGCCTTGGTCTCAACCCCTTACCAGCTTTAGCTCCCAATAATGTCTACAGTCATAATGCAACAGTGTTGACTAATCGA