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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05988 alignment
(12 sequences with 338 aa)


Q9I3Z4_PSEAE/5-236 LQDHPVSSRE--------------QWLDARRRLLAREKQLTRLRDQVAAERRELP-WVRVDKDYRFQ-----GERGERSLAELFG-GNSQLIVYHFMFA--PGW----------------SEGCVGCSFLADHIDGANRHLAHHDVSLVAVSRAPLEEFQAFRRRMGWR-FDWYSSYGSDFNRDFGVSFDKAQLAAGSVDYNYQPTPD...........................-------------AGEEMPGASVFLRNPAGEVFHTYSAYA-----------RGLDILLTTYTFLDLTPKGRNED----------....-AIMDWLRHHDRYDE
Q8Y0D1_RALSO/1-234 MQQHPVVSRE--------------EWLVKRRALLAREKEAIHQRDAITAERLALP-WVKVDTRYVFD-----TASGKKTLADLFD-GRSQLMIYHFMLG--PGW----------------AAGCPGCSLVADHLGGTLAHLNHHDVTLIAVSRAPLPEIEAYRQRMGWQ-FPWASSFGTTFNHDFRVSFTPDELASGAVDYNYTSTQS...........................-----------AQANDELPGLSAFYKDEAGNVYHTYSTYA-----------RGLEDLIGTFLILDRAPKGRNES----------....-GPMEWVRRHDEYGD
Q8UH32_AGRT5/1-233 MS-HPVVSKE--------------EWLAARRDLLVKEKELTRARDRLNEARRALP-WEEVTKDYIFD-----APSGPRSLQELFG-DCSQLIVYHFMLA--PDW----------------EEGCVGCSFFADHVDGALVHLRHGDAGFVAVSRAPLEKIEGYKNRMGWK-FPWVSAEGSDFNYDYQASFRDEDVEKGEITYNYRDMAP...........................-----------FGDLKDLHGISVFAKGEDGKIYHTYSTYA-----------RGAEQTLGTLMLLDLVPKGRNED----------....-EVMDWVRRHDQYED
Q92RU4_RHIME/2-270 MTAHAIGTRE--------------EWLAARLDLLEAEKNLTRRSDELAKWRRELP-WVRIDKAYRFE-----TDEGEASLRDLFK-GRSQLLVYHFMFG--PDY----------------TAGCPSCSAIADGFNGIVAHLENHDVAFSAVSRAPLAKLTAYKRRLGWS-FPWASSDDGAFNRDFCVWFTEQQQREGGIEYNFRREPPipeqpaseplagrtvrewdasgsegpvAQIAAMTGTDVATYTRDRPGVSAFALE-DGIVYHTYSSYA-----------RGLDGLWGMYQWLDRTPKGRNEN----------....-GI--WWRRHDEYAQ
Q98JM6_RHILO/1-236 MTDHIIAPYS--------------DWFEAHKSHLVKEKALTRQRQQLAAERRALP-WLRIDKPYAFD-----TTQGRKSLADLFE-GRSQLIIYHFMFP--PNA----------------DYRCTGCSFLCDHIDAANQHLRHHDVSLVVCARAPLAELMDFKARMNWQ-FDWVSSFGSDFNFDFQVSFTEDQISSGQVLFNFEEVAM...........................-------------TGRDRGGTTVFYRDDDGQIYCTFQVRG-----------RGGENLIGTYSYLDLTPIGRNENGPS-------....HTLGDWVRLHDQYDD
Q98FI9_RHILO/20-255 MHRNKVVSRE--------------DWFQAHKAHLAREKELTRLRERVAAERRELP-WLKVRKDYVFE-----TEQGPKKLAELFA-NRSQLIVYHFVFA--PGS----------------THHCESCAFVADHMDGANRHLRHHDVSLVTISRAPLVELLPYKQRMGWT-FDWVSSYASDFNFDMQVSFTDRQIASGEAVYNFETPVL...........................-------------TSKDLPGTTVFYKGETGDIFLTFMSRA-----------RGSEQFIGAYQYLDIAPKGRDETGPY-------....GTFMDWVRLHDEYGN
Q98JJ9_RHILO/7-227 MKTPPIVSRQ--------------EWDAAREKMLVKEKATLRAKDALAAERRRMP-WMEVDKAYVFE-----GPNGKASLLDLFE-GRRQLIVYRAFFE--PGV------------YGWPDHACRGCSLGADQV-GHLAHLNARNTTLAYASRAPQADIVRLKARMGWE-MPWYTITD-SFDKDFGV---------------------...........................---------------DEWHGHNVFIHDG-DRVFRTYLINS-----------RGDEQMGTVWSYLDATPLGRQEIWEDSPEGYPQ....TPLYSWWNWHDNYEA
Q92UT2_RHIME/5-225 MHTPPLVPPQ--------------AWEAAREQLLVKEKALTRARDALAAERRQMP-WMAVEKEYAFE-----GPEGRVSLVDLFE-GRRQLIVYRAFFE--PGV------------FGWPDHACRGCSMVADQV-AHLAHLNARDTTLVFVSRAPQADIARLKARMGWQ-IPWFTVTD-SFDADFGV---------------------...........................---------------DEWHGTNVFYRDG-DRVFRTYFINN-----------RGDEQMGSTWNYLDITPLGRQEVWEDSPEGYPQ....TPTYKWWNWHDSYVK
Q93JH9_STRCO/1-229 MSLPEIVTRA--------------DWRAAREALLAKEKAATRARDALNAERRGLP-MVEVDKEYVFE-----GGDGKATLLDLFE-GREQLVVYHFMFA--PEW----------------DAGCRSCSAFLDQI-AHLAHLRARGTSFAAVSRAPYPRILPFKARMGWT-LPWYSSYVSDFNTDFEATLEHE----GEL---------...........................---------------VERPGLSCFLRDRE-RVFHTYSTYE-----------RGLDGLGSTTSLLDLTALGRREPWE-KPEGRASalgaPAGSRGVRYHDEYED
Q8CV44_OCEIH/7-254 PTLPQIVSRD--------------EWLEARKELLYKEKEFTKERDELNAERRRLP-MVEIDKEYVLD-----GPHGKTRLLDLFE-GRPQLIVHHFMFD--PEW----------------DAGCPACSLAADNM-GYLSHLHARNTSLALVSRATLPKLQRYKERMGWN-IPWYSSYDSDFNYDFHATLDE---SVAPIEYNYLTK--...........................DELVQKGVPVDSGQSMEVPGVSTFLRDG-ERIFHTYTTYA-----------RGTDLILGTFNYLDLTALGRQEDWE-QPPGRSD....GRGKTWLRRHDEYDH
Q98I82_RHILO/14-271 RTTAPGRRREPREPIMITFPNESARYRTAREKLLKKEIELRRAMEAVAEARRALPPGGLIRQDYVFDALDADGRPAKTKLSELFAPGKDSLILYQMMFPRHPQETRDVATSGGTARLARPDQPCPSCTALLDQWDGAVGHLEAAGFNFAVVAKTPLENLVTLGRDRGWKNMRLVSSAANSFKRDYNAETAD-----------------...........................--------------GAQIPLLSVFHRDGDG-IRHFWSSELGFAPPESGQDPRAIGTCEILWNLMDFTPQGRPD-----------....-----WHEQL-QYGC
Q92NT5_RHIME/3-234 MQTTPIAAKELAARNRARFPNESADYRRARNALLAEEIELRRHIERVSELRRRLPPGGEVTKTYRFE-----SENGPVTLADLFG-DKNTLIIYSYMFG--PQR----------------ERPCPMCTSLMAGWEGKVPDIEQR-VALAMVARSPVERLLAAKKARGWTQLKVYSDSDGAFTRDY-VSAE------------------...........................--------------DEDVPGYTVFTRRD-GTIRHFWSAEISGEMADPGQDPRGAPDPDPLWTLLDTTPEGRGADWYPKL-----....-----------EYSS