EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05988 alignment
(12 sequences with 1014 bp)


Q9I3Z4_PSEAE/5-236 TTGCAGGACCACCCGGTGAGCAGCCGGGAA------------------------------------------CAATGGCTGGACGCCCGTCGCCGCCTGCTGGCGCGGGAAAAGCAACTCACCCGCCTGCGCGACCAGGTCGCCGCCGAACGACGCGAACTGCCC---TGGGTCAGGGTGGACAAGGACTACCGCTTCCAG---------------GGCGAGCGCGGTGAGCGTTCGCTGGCCGAGTTGTTCGGC---GGCAATAGCCAGCTAATCGTCTACCACTTCATGTTCGCG------CCGGGCTGG------------------------------------------------AGCGAAGGCTGCGTCGGCTGTTCGTTCCTCGCCGACCACATCGACGGCGCCAACCGGCACCTGGCGCACCACGACGTCAGCCTGGTGGCGGTATCGCGCGCGCCCCTGGAAGAGTTCCAGGCGTTCCGCCGGCGCATGGGCTGGCGT---TTCGACTGGTACTCCTCGTACGGCAGCGATTTCAACCGTGACTTCGGGGTGTCCTTCGACAAGGCGCAACTGGCCGCCGGCAGCGTCGACTACAACTACCAGCCGACCCCCGAC.................................................................................---------------------------------------GCCGGCGAGGAAATGCCGGGTGCCAGCGTGTTCCTGCGCAATCCGGCGGGCGAGGTGTTCCACACCTATTCGGCCTATGCG---------------------------------CGCGGCCTCGACATCCTGCTCACCACCTACACCTTCCTCGACCTGACGCCCAAGGGGCGCAACGAGGAC------------------------------............---GCGATCATGGACTGGCTGCGTCACCACGACCGCTACGACGAG
Q8Y0D1_RALSO/1-234 ATGCAGCAGCACCCTGTTGTTTCGAGAGAG------------------------------------------GAATGGCTGGTCAAGCGCCGCGCGCTGTTGGCCAGAGAGAAGGAGGCGATTCATCAGCGCGATGCCATTACCGCCGAGCGGCTGGCGCTGCCG---TGGGTCAAGGTCGACACACGCTATGTGTTCGAT---------------ACCGCGTCAGGCAAGAAGACGCTGGCCGACCTGTTCGAC---GGCCGCAGCCAGCTGATGATCTACCACTTCATGCTCGGT------CCGGGCTGG------------------------------------------------GCGGCCGGCTGCCCGGGCTGCTCGCTGGTGGCGGACCACCTGGGCGGAACGCTCGCGCACCTGAATCATCACGACGTCACGTTGATCGCCGTGTCGCGCGCGCCGCTGCCCGAGATCGAGGCCTACCGGCAGCGTATGGGCTGGCAG---TTTCCGTGGGCCTCGTCGTTCGGCACGACCTTCAACCATGATTTCCGTGTCAGCTTCACCCCGGACGAACTGGCCAGCGGCGCCGTCGACTACAACTACACGTCCACCCAATCG.................................................................................---------------------------------GCGCAAGCCAACGACGAACTGCCCGGCCTGAGCGCCTTCTACAAGGACGAGGCGGGCAACGTGTATCACACGTACTCGACCTACGCG---------------------------------CGCGGGCTCGAAGACCTGATCGGCACCTTCCTGATCCTCGATCGGGCGCCGAAGGGGCGCAATGAGTCC------------------------------............---GGCCCCATGGAATGGGTGCGCCGTCACGATGAATACGGGGAT
Q8UH32_AGRT5/1-233 ATGTCT---CATCCCGTCGTTTCGAAGGAG------------------------------------------GAGTGGCTTGCGGCCCGCCGCGATCTGCTGGTGAAGGAAAAGGAACTGACCCGCGCCCGTGACAGGCTGAATGAGGCCCGGCGCGCACTGCCC---TGGGAGGAGGTGACGAAGGACTATATCTTCGAT---------------GCACCTTCCGGCCCCAGGTCACTGCAAGAACTATTCGGC---GATTGCAGTCAGCTCATCGTTTATCACTTCATGCTGGCG------CCGGACTGG------------------------------------------------GAGGAGGGCTGCGTCGGTTGCTCCTTTTTCGCCGATCATGTCGATGGCGCGCTCGTTCATCTCAGGCATGGCGATGCGGGTTTCGTCGCGGTTTCGCGTGCGCCGCTTGAAAAGATCGAAGGCTATAAAAACCGCATGGGCTGGAAA---TTCCCCTGGGTTTCGGCCGAGGGCAGCGATTTCAACTATGATTACCAGGCCTCGTTTCGCGACGAGGACGTGGAAAAAGGTGAAATCACCTATAATTACCGCGACATGGCGCCC.................................................................................---------------------------------TTTGGCGACCTGAAGGACCTGCACGGCATCAGCGTTTTCGCCAAGGGTGAGGACGGCAAGATCTACCACACCTATTCCACTTACGCC---------------------------------CGTGGCGCCGAGCAGACGCTCGGCACGTTGATGCTTCTCGATCTGGTGCCAAAAGGCCGTAATGAAGAT------------------------------............---GAGGTAATGGATTGGGTGCGCCGCCATGACCAGTATGAGGAT
Q92RU4_RHIME/2-270 ATGACGGCACATGCAATCGGAACACGGGAA------------------------------------------GAATGGCTGGCTGCGCGGCTCGACCTGCTCGAGGCCGAAAAGAACCTGACGCGGCGAAGCGACGAGCTGGCGAAGTGGCGCCGGGAATTGCCT---TGGGTACGGATCGACAAGGCGTACCGGTTCGAG---------------ACTGACGAAGGCGAGGCCTCGCTGCGCGACCTCTTCAAG---GGGCGTTCGCAACTCCTCGTCTACCATTTCATGTTCGGG------CCCGATTAT------------------------------------------------ACCGCCGGCTGCCCGTCCTGTTCGGCGATCGCCGATGGTTTCAACGGGATCGTCGCTCATCTCGAAAACCACGACGTCGCCTTCTCCGCGGTCTCGCGCGCGCCGCTTGCGAAGCTCACGGCCTATAAGCGACGGCTGGGATGGAGC---TTCCCCTGGGCTTCTTCGGACGACGGCGCCTTCAACCGTGATTTCTGCGTCTGGTTCACCGAACAACAACAGCGCGAGGGCGGCATCGAGTATAATTTCCGCCGCGAGCCGCCAatccccgagcaaccggcgtccgagccgctcgcgggcaggacagtccgggaatgggacgcaagcggcagcgaggggccggtcGCACAGATCGCAGCCATGACGGGGACCGACGTCGCCACCTATACACGCGACAGGCCCGGTGTCAGCGCCTTCGCGCTCGAA---GACGGCATCGTCTACCACACCTACTCCAGTTATGCG---------------------------------CGTGGACTGGATGGGCTATGGGGCATGTATCAGTGGCTCGACCGGACCCCCAAGGGACGCAACGAGAAC------------------------------............---GGCATC------TGGTGGCGCCGCCACGACGAATATGCCCAA
Q98JM6_RHILO/1-236 ATGACCGACCACATCATCGCGCCTTACTCG------------------------------------------GACTGGTTTGAAGCGCATAAATCGCATCTCGTAAAAGAGAAGGCGTTGACGCGCCAGCGTCAACAACTCGCGGCGGAGCGGCGCGCGCTGCCG---TGGCTGCGCATCGACAAGCCCTACGCGTTCGAT---------------ACGACCCAGGGAAGGAAATCGCTAGCCGATCTTTTCGAG---GGCCGCAGCCAGTTGATCATCTATCACTTCATGTTTCCG------CCCAACGCG------------------------------------------------GACTATCGCTGCACCGGTTGTTCGTTCCTTTGCGACCACATCGACGCCGCCAACCAGCATCTCAGGCATCACGACGTCTCCCTGGTCGTCTGCGCGCGCGCGCCTCTGGCCGAGCTCATGGATTTCAAGGCGCGGATGAATTGGCAG---TTCGATTGGGTTTCGTCATTCGGCAGCGATTTCAATTTCGACTTCCAGGTATCGTTCACCGAGGACCAGATCAGCTCGGGCCAGGTGCTGTTCAATTTCGAAGAGGTCGCGATG.................................................................................---------------------------------------ACAGGCAGGGATCGCGGTGGCACGACCGTTTTCTACAGGGATGACGATGGCCAGATCTATTGCACTTTCCAGGTGCGGGGC---------------------------------CGGGGCGGCGAGAACCTGATCGGGACCTATAGCTATCTCGACCTCACTCCCATCGGCCGCAATGAAAACGGGCCGTCG---------------------............CATACGCTGGGCGATTGGGTCCGCCTTCACGATCAGTACGATGAT
Q98FI9_RHILO/20-255 ATGCATCGCAACAAGGTCGTTTCACGCGAA------------------------------------------GACTGGTTCCAGGCGCACAAGGCGCATCTGGCGCGTGAGAAGGAACTGACGCGGTTGCGCGAACGTGTTGCGGCCGAGCGGCGGGAACTGCCC---TGGCTGAAAGTAAGGAAGGACTACGTCTTTGAG---------------ACGGAGCAAGGGCCGAAGAAACTGGCCGAGCTTTTCGCC---AACCGCAGCCAGTTGATCGTCTACCACTTCGTGTTCGCG------CCAGGTTCC------------------------------------------------ACCCATCACTGCGAAAGCTGTGCCTTCGTCGCCGACCATATGGACGGCGCCAACCGGCATCTCAGGCATCATGACGTGTCGCTTGTCACCATATCACGGGCGCCGCTCGTCGAGCTGCTGCCCTACAAGCAGCGCATGGGCTGGACA---TTCGACTGGGTGTCTTCCTATGCGTCGGACTTCAACTTCGATATGCAGGTGTCCTTCACCGACAGACAGATCGCATCCGGCGAAGCGGTCTACAATTTCGAAACACCGGTGCTG.................................................................................---------------------------------------ACGTCGAAGGACCTGCCCGGCACCACCGTCTTCTACAAGGGCGAAACCGGTGACATCTTTCTGACCTTCATGTCACGCGCC---------------------------------CGCGGCAGCGAGCAGTTCATCGGCGCCTACCAGTACCTCGACATTGCACCGAAAGGTCGTGACGAGACCGGTCCATAC---------------------............GGGACCTTCATGGACTGGGTGCGGCTGCACGATGAATATGGCAAC
Q98JJ9_RHILO/7-227 ATGAAGACCCCGCCGATCGTTTCGCGGCAG------------------------------------------GAATGGGACGCCGCCCGCGAAAAGATGCTGGTGAAGGAGAAGGCGACGCTGCGCGCCAAGGACGCGCTCGCCGCCGAACGCCGGCGCATGCCG---TGGATGGAAGTGGACAAGGCCTATGTATTCGAA---------------GGCCCCAACGGCAAGGCAAGCCTGCTCGACCTGTTCGAA---GGCCGCCGCCAGCTGATCGTCTACCGCGCCTTCTTCGAG------CCGGGCGTC------------------------------------TATGGCTGGCCCGATCATGCCTGCCGCGGCTGCTCACTCGGCGCCGACCAGGTC---GGCCACCTCGCCCATCTCAACGCCCGCAACACCACGCTGGCCTACGCCTCACGGGCACCGCAGGCCGACATTGTCAGGCTGAAGGCGCGGATGGGCTGGGAG---ATGCCCTGGTACACGATCACCGAC---AGCTTCGACAAGGATTTCGGCGTC---------------------------------------------------------------.................................................................................---------------------------------------------GACGAGTGGCACGGCCACAACGTCTTCATCCATGACGGC---GACCGCGTCTTCCGCACCTATCTCATCAACAGC---------------------------------CGCGGCGACGAGCAGATGGGCACGGTCTGGAGCTATCTCGACGCTACCCCGCTCGGCCGCCAGGAGATCTGGGAGGATTCGCCCGAAGGCTATCCCCAG............ACCCCGCTCTACAGCTGGTGGAACTGGCACGACAATTACGAAGCC
Q92UT2_RHIME/5-225 ATGCACACGCCACCCCTCGTCCCGCCGCAG------------------------------------------GCCTGGGAGGCTGCGCGCGAGCAGCTGCTCGTCAAGGAAAAGGCCCTGACGCGGGCGCGCGACGCGCTGGCCGCCGAGCGCCGGCAGATGCCA---TGGATGGCTGTAGAGAAGGAATATGCGTTCGAA---------------GGCCCGGAGGGCCGTGTCAGCCTCGTCGACTTGTTCGAG---GGTCGGCGACAGCTGATCGTCTACCGCGCCTTCTTCGAA------CCGGGCGTT------------------------------------TTCGGCTGGCCCGATCACGCCTGCAGAGGCTGCTCCATGGTGGCCGATCAGGTG---GCGCACCTTGCCCACCTGAACGCCCGTGACACAACCCTCGTCTTCGTCTCGCGGGCACCCCAGGCGGACATCGCCCGGCTGAAGGCGCGCATGGGATGGCAG---ATCCCGTGGTTTACCGTGACGGAC---AGCTTCGACGCCGATTTCGGGGTG---------------------------------------------------------------.................................................................................---------------------------------------------GACGAGTGGCACGGCACGAACGTGTTCTATCGCGACGGC---GACCGCGTTTTCCGTACCTATTTCATCAACAAT---------------------------------CGCGGCGACGAGCAGATGGGCAGCACGTGGAATTACCTCGACATCACGCCGCTCGGCCGGCAGGAAGTCTGGGAGGATTCGCCCGAAGGCTATCCGCAG............ACCCCGACCTACAAATGGTGGAACTGGCACGACAGCTACGTCAAA
Q93JH9_STRCO/1-229 ATGTCGCTGCCCGAGATCGTCACCCGCGCG------------------------------------------GACTGGCGCGCGGCGCGCGAGGCCTTACTGGCCAAGGAGAAGGCGGCCACCCGCGCGCGTGACGCCCTCAACGCCGAGCGGCGCGGGCTGCCC---ATGGTGGAGGTCGACAAGGAGTACGTGTTCGAG---------------GGCGGCGACGGCAAGGCCACCCTGCTCGACCTCTTCGAG---GGCCGGGAGCAGCTCGTCGTCTACCACTTCATGTTCGCG------CCCGAGTGG------------------------------------------------GACGCCGGCTGCCGCAGCTGCTCGGCGTTCCTGGACCAGATC---GCCCATCTCGCGCACCTCAGGGCCCGCGGTACGTCCTTCGCGGCCGTTTCCCGGGCGCCGTACCCGAGGATCCTGCCGTTCAAGGCGCGGATGGGCTGGACA---CTGCCCTGGTACTCGTCGTACGTCAGCGACTTCAACACCGACTTCGAGGCGACCCTGGAGCACGAG------------GGCGAGCTG---------------------------.................................................................................---------------------------------------------GTCGAGCGGCCGGGGCTCAGCTGCTTCCTGCGGGACCGCGAA---CGGGTCTTCCACACCTACTCGACGTACGAG---------------------------------CGCGGCCTCGACGGGCTCGGATCCACCACCAGCCTGCTCGACCTGACCGCGCTCGGCCGGCGGGAGCCGTGGGAG---AAACCGGAGGGGCGCGCGTCGgctctcggtgcgCCCGCGGGCAGCCGGGGAGTGCGATATCACGACGAGTACGAGGAC
Q8CV44_OCEIH/7-254 CCAACACTACCCCAAATCGTGTCACGTGAC------------------------------------------GAATGGCTTGAGGCTCGTAAGGAACTGCTGTACAAAGAGAAGGAATTTACTAAGGAACGGGATGAACTGAATGCCGAACGCCGTCGACTCCCA---ATGGTGGAGATTGATAAGGAATATGTCTTAGAT---------------GGTCCACATGGTAAGACCCGTCTGCTTGATCTGTTTGAA---GGGCGTCCTCAACTTATTGTTCATCATTTCATGTTCGAT------CCCGAGTGG------------------------------------------------GACGCAGGCTGTCCGGCTTGCTCACTGGCTGCGGACAACATG---GGTTACCTTTCCCATTTGCATGCACGTAACACGTCACTTGCTCTAGTATCCCGTGCGACACTTCCCAAGCTTCAGCGCTACAAGGAACGCATGGGGTGGAAC---ATTCCTTGGTACTCATCCTACGATAGCGACTTTAATTATGACTTTCATGCTACGCTTGACGAA---------TCCGTTGCTCCTATCGAATACAATTACTTGACCAAG------.................................................................................GATGAGCTTGTTCAGAAGGGCGTACCCGTTGACTCCGGACAATCAATGGAGGTGCCTGGCGTGAGCACCTTTCTTCGTGATGGT---GAAAGGATTTTTCATACCTATACGACTTACGCC---------------------------------CGTGGAACTGACCTAATCCTTGGTACTTTCAACTACCTTGATTTAACAGCACTCGGCAGACAGGAGGACTGGGAG---CAGCCCCCCGGACGCAGTGAC............GGAAGAGGTAAGACTTGGCTCCGCCGTCATGACGAATATGATCAT
Q98I82_RHILO/14-271 AGAACAACAGCGCCGGGACGCCGGCGCGAACCCAGGGAGCCGATCATGATCACCTTTCCCAACGAATCCGCCAGATACCGCACCGCCCGCGAAAAGCTGCTGAAGAAGGAAATCGAGCTGCGCCGCGCCATGGAAGCCGTGGCCGAGGCGCGGCGCGCGCTGCCGCCGGGCGGGCTGATCCGCCAGGATTATGTCTTCGATGCGCTCGATGCCGACGGCAGGCCGGCCAAGACAAAATTGTCGGAACTGTTCGCGCCGGGCAAGGATAGTCTCATCCTCTACCAGATGATGTTTCCGCGCCATCCGCAGGAAACACGCGACGTGGCGACATCGGGCGGCACGGCCAGGCTCGCCCGGCCGGATCAGCCATGCCCGTCCTGCACGGCGCTGCTCGACCAGTGGGACGGCGCCGTCGGCCATCTCGAAGCCGCCGGCTTCAACTTTGCGGTGGTGGCGAAAACCCCTTTGGAAAACCTGGTCACGCTCGGCCGCGATCGCGGCTGGAAGAACATGCGGCTGGTGTCGTCGGCCGCCAACAGCTTCAAGCGCGACTACAATGCCGAGACGGCAGAC---------------------------------------------------.................................................................................------------------------------------------GGCGCGCAGATCCCGCTTTTGTCGGTGTTTCACCGCGACGGCGACGGC---ATCAGGCATTTCTGGTCGTCCGAGCTCGGCTTCGCGCCGCCGGAGTCCGGCCAGGACCCGCGCGCCATCGGCACCTGCGAGATCCTGTGGAACCTGATGGATTTCACGCCGCAGGGCAGGCCGGAT---------------------------------............---------------TGGCATGAGCAGCTG---CAATATGGGTGT
Q92NT5_RHIME/3-234 ATGCAGACGACGCCGATCGCCGCTAAGGAGCTGGCAGCGCGAAACCGCGCCCGCTTTCCCAACGAAAGTGCCGACTACCGCCGGGCGCGTAATGCGCTTCTCGCCGAGGAGATCGAATTGAGGCGCCACATCGAGCGGGTTTCGGAGCTGCGCAGGCGACTGCCGCCGGGCGGCGAAGTGACCAAGACCTATCGTTTCGAG---------------AGTGAGAACGGACCCGTTACACTTGCCGATCTCTTCGGC---GACAAGAATACCCTCATCATCTACAGCTATATGTTCGGA------CCGCAGCGC------------------------------------------------GAAAGGCCCTGCCCCATGTGCACCTCCCTGATGGCCGGCTGGGAAGGCAAGGTGCCCGATATCGAACAGCGC---GTGGCACTCGCCATGGTCGCCCGTTCGCCGGTGGAGAGACTGCTCGCTGCAAAGAAGGCCCGCGGCTGGACGCAATTGAAGGTCTATTCCGATAGCGACGGCGCCTTCACCCGAGACTAT---GTCAGTGCCGAG------------------------------------------------------.................................................................................------------------------------------------GATGAGGACGTTCCGGGCTACACGGTCTTCACGCGGAGAGAC---GGAACGATCCGGCATTTCTGGAGTGCGGAGATCAGCGGCGAGATGGCCGATCCGGGCCAGGACCCGCGCGGCGCACCCGATCCCGACCCGTTATGGACCCTGCTCGACACCACGCCCGAAGGCCGGGGTGCCGACTGGTACCCGAAACTC---------------............---------------------------------GAATATAGCAGC