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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05949 alignment
(18 sequences with 260 aa)


Q9XA11_STRCO/8-236 VFALAGLIFFTSFDTAK-......----GTNIRTDSSLLKLSDLIHERSRENGVLEESNGALREDVE-------SlaerDDGRTKSEDDKLAALEEKAGTQKLTGEAITVTLDDAPPDATAKLPGY--PEPQPDYLVIHQQDLQAVVNALWQGGAEGIKVMD.--.QRLISTSAVRCV..GNTLILQGRVYSP-P---YKIQAVGDPERLKKALAKSPAIQNYMVYVNVYGLGWKVEDDG.RATLPGYSGTADLHYAQPV
P71582_MYCTU/31-257 VCLLAGLLLAATHGV---......---SGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRS--....VDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQR----DANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQD.--.QRIIAMSIARCV..GNTLLLNGRTYSP-P---YTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHP.DLQIVGYADPVRMHFAQPA
Q8G6P6_BIFLO/23-253 VIALTGFLLSTNVRVNRT......---VAVTNDTADLVEQGVDEVNQLQQDVSDLTEQVANLTDALKADGTDGTD....---STQNQGKDSSNVDSSLMLPALSGSGVTVTLDDSPLWENAVNNNG--TTANINDYVIHQQDVESVVNALWAGGADALMIMD.--.QRVLFNSAVICS..GNVLSLHGKKYSP-P---FTISAIGDPQRLRAALNDSEAITILKQYVTAFGIGYKVENAE.DLQFPATAALLQQLKYATV
Q9KZP7_STRCO/70-282 LLFGLGFGLAVQVASNSD......-SDSALRGARQ---EDLVRILDELDDRTQRLEDEKQGLEKQRDELENSSDQ....AEEARKQTLEKERQLGILAGTVAAQGPGITVTIEDTKG-------------------TVEADMLLDAVQELRAAGAEAIQVNG.--.VRVVAGTYLADA..GNSVTVDGNKINA-P---YRFQVIGKPQDLEPALNIPGGV--VQTL-EKEQATVTVERSS.KIVVDALRAAERPDYARSS
Q8G9M8_RHOFA/27-242 LMCVLGIGIATQVRETST......--SGNLENSRP---EDLLVVLDSLTRREASIRDEISALQGTLATLRQSGSG....SDAAVAEAQERLSALSIQIGTVAARGPGVTLTIDDTDA-------------------GVGAEVLLDALQELRAAGAEALQIDGgGVaVRIGVDSWMAGP..AGRVVVDGRELRA-P---YTFTAIGDPATLEAALNIPGGV--IDTV-ARNGASSRVERSD.QVTVSALRDPRPRQYAQPG
Y1856_MYCBO/76-291 LCLVLGVAIVTQVRQTDS......--GDSLETARP---ADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNT....DQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPG-------------------VAPEVMIDVINELRAAGAEAIQINDaHRsVRVGVDTWVVGV..PGSLTVDTKVLSP-P---YSILAIGDPPTLAAAMNIPGGA--QDGV-KRVGGRMVVQQAD.RVDVTALRQPKQHQYAQPV
Q8G699_BIFLO/61-272 MCALLGFAYMSQINNTKS......----TYETMDE---SELVRLLNESNTQISNLEQRKTQLNSQLNSLKSAANE....QEQARKIAKQNEETSGLISGRLPAKGQGVTIRIGRGLTT------------------KVDASIMFNLIEELRNAGAEVIAINN.--.VRVITSTYIQDA..EEGLIVDGTTIKP-T---YTVKAIGNPQELSNAVDIAGGV--GAQLQVKYGSNVNVQPSD.SIIIDEVREATQNQYAKTV
Q8RCX7_THETN/17-247 VFVTMGFMISMQIKTVQGgikqplPPVSSTNYARV---EELTQQLKKVQEEKQNLEQQLAELTKRFQEYEEAASK....NDAALKNLQKDVEKYKALAGFTDMVGPGVIVTVSDSDLQPR--------EGEDPNLYLVHDEDLLNIVNELKAGGAEAIAIND.--.QRLIATSEIRCV..GPTININSTRYAP-P---YVIKAIGNPETLVASLKLKGGI--IETL-EFYGIKVDIQTSD.KVVVPGYSEPVKFFYAKPI
Q8R9G9_THETN/14-236 VSLVLGIMLSTQFKIVKK......--GGVVTAQRA---EELATQLKQLQSEKEALLKQISELEAKINAYEDSASK....NSVITQTLKSEVEKYKELAGLTDLQGPGVIVTVNDSKQPVP--------PGQDPNLFLVHDEDLLRIVNELRAAGAEAISLND.--.QRLIATSEIRCV..GPTVVVNSVRFAA-P---YVIKAIGDPDTLEAALKLKGGV--VDSL-ATWGIEVNIKKSD.KIVIKKYDGVLKFRYAKPL
Q9KZP5_STRCO/62-295 LGLAAGLVLAALVVTVGA...aqaRVAAPVVAKER---EELVDRIEGETSAADELEKSVDELRDDVDARRREALE....----KSGDGDRSDLVGILSGAVEVHGPGVKLVVNDAKDVATGADGQPRGTSGFSDTGRVRDRDMQRVVNGLWESGAEAISVNG.--.QRLTALSAIRAA..GDAILVDNRPLVP-P---YTVLAVGDGERLSRGFQDSADGLYLHALEESYGIRTAISVAD.DLKLPAAPSVI-VRTAQPI
Y1854_MYCBO/75-305 AATLVAAVFAAAVAQARS......-----VAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSAKVDDVRRIVLA....DDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGASPNLSDVSK--QRVSGSQQIILDRDLQLVVNSLWESGAEAISIDG.--.VRIGPNVTIRQA..GGAILVDNNPTSS-P---YTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGD.GLALPA-GATRDVKFAKQI
Q8G697_BIFLO/100-324 ICVGVGFACSLFVQQLQ-......------SDPRKQVRQTLATQLENRNSQIDELTTDVNNLRSQVDEQSKKISG....-----SVKSDTLIQDEMVNGATVVEGEGITMTLADPIAASQSDQSSSTRVGTSTNIRVITDLDLQQLVSLMFQNGAEAIAING.--.NRLGAQTSIRKA..GGHILIGMTAIQS-P---YTIEAIGDKSALAEAMGKKKLASLYDSF-KEAGIYPQVSKSN.SITLEA-AVTGEVKYAERN
Q97H91_CLOAB/13-246 ASVFLGVLISSNMSFGNK......--EKKLVYLNSKQYEDAYRKKSVLLNDINNINEQYFDLKNSIKDYNKSSKD....FESTKRQMEDELILNKMELGTLDVVGEGVEITLDDSGNQVSASSEDANFREIRTIYQVIHDFDMRAVINDIKCSGAEAISING.--.QRIVSNTEIYCN..AEFLLINGVKISA-P---FNIKAIGNKNKLKTYMLASGNY--LQRL-KRRSIYVNLKTVN.DVKIPAFKGELRHSNIKSK
Q8XJA6_CLOPE/13-241 ASVIVGLLISMNISFDGI......ETTKVLNAKEY---QEAYNKRNNLYNEISKLKENNRELQKKINNYSKNDED....SNKISKDMIEELNNNLMLSGLEEAKGPGLKIVLEDGGEAFSGEVV----DDFMRLLRTIHDDDMIKVINELKAAGAEAISINN.--.QRIIYNTEIYCG..GQFLRMNGVKIPA-P---FYVNVIGDPEKMENQIMRDGSY--IKTL-MNRGIKVQITKSD.DITMPAYISDMNSKYMEPN
Q97H89_CLOAB/13-241 VCCILGFMIAHQLKIVSF......---QDTKQNTGMESAEISEELNKLSKEKSDLQKKVNELQSQVKGYQNAAAS....SGSMNKQIVNELNTSNMLIGSVDVTGPGIILVITPQNISSSTN------NSTGQNNDVITGEDLLYLINELNFSQAEAISIND.--.VRITSMTGIRSSsgGSDIFVGDDRIS--PYEKITIKAIGDSKLLYSALSYPGVL-----SSVPSGYKADYDKYG.SIKIGKTNKVIKFDYAKPI
Q8XJA4_CLOPE/13-237 VCALLGFLLTYQFKIINN......KEKNIIENYNQ---NDIMAEIDGLKKEKEELQKNNDSLNKRLKEMEDAAAS....KGDVNNKIKEQLDKTRMILGTEEVKGPGIILSITPKSPLLT-----------SKDPEYISEKEIIHILNLLAFSGAEAIAVND.--.IRITPQTGIKNA..SNFIWIGNNERIS-PKEKLTIKVIGNQDNLIKGIDFPGEM---DYGVLGGNYDYKYEKKD.SITIPKTTQNLSSEYLKKV
Q9K9T4_BACHD/10-232 VTLLIGFMLAVLFQTTKE......-----PVVRDTRDVRELRQELVQEQEKRQQLADEIENTESLLSQYRQSLEE....QQEIDSVIEEQIETLRESAGLTEVSGEGLVITIKSLYEND---------AYVGSTSQNVSPDFLRSLLNELNIYQAKEIAIGT.--.ERIISTSTFYEV..NGTTQVNTRRLPPLP---IEVKVLSDDVERLHNQMVVSAA--VELA-EIEGLQLEFEIRD.EITLPAFDQTPRVRFMEEV
Q45544_BACSU/13-233 LMVIFGLMISVQFNSLKH......-----PKVRDTRDMWDIREELTSEQKKQEKLLAEINKYDKFVNSYSQTKEM....--TKETALNNTLQSLKKTAGMTDITGSGIVITISPLFSES----------LTGEPIENPPPDLLKKLINELNSYGAEHISINE.--.RRVVNHTVIRDI..NGTTKIDGYALDDYP---LTVKVLAKDPDMLHSRVKGSGL--EDLF-ASENLALKAGKSEsKLTLKAYDRPLDVQQLKLL