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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF05923 - APC_crr) |
| APC cysteine-rich region |
| (Pfam reference: accession no. PF05923) |
| (Interpro reference: accession no. IPR009223) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
27 sequences @ 30 aa (ave. pairwise identity: 0.37) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 15.15) |
| nucleotides (available for above) |
27 sequences @ 90 bp (ave. pairwise identity: 0.41) |
New Hampshire format (total tree length: 12.64) |
|
amino acids, restricted set (corresp. to available nt seqs) |
27 sequences @ 30 aa (ave. pairwise identity: 0.37) |
New Hampshire format (total tree length: 15.15) |