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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05922 phylogeny
for restricted amino acid alignment


 
((((((((Q8SQJ3_ENCCU/17-93,Q8RBJ2_THETN/79-146),(((Q9RW57_DEIRA/47-126,(((Q9KWR4_BACPU/41-108,SUBT_BACLI/38-105),O87655_BACSU/38-107),(SUBE_BACSU/33-95,((Q45466_BACSP/35-103,Q45467_BACSP/37-103),(Q45523_BACSP/40-102,((ELYA_BACHD/29-93,((O66153_BACSP/33-111,ELYA_BACAO/33-111),Q45522_BACSP/32-113)),Q9KF13_BACHD/34-100)))))),((Q45669_9BACI/38-100,YCT5_YEAST/18-91),Q9L705_9MICO/50-136)),(P97097_9BACI/49-117,(Q56365_9BACL/37-106,Q9S3Y3_BACTU/38-108)))),((SUBF_BACSU/67-178,Q8ENZ2_OCEIH/87-198),((Q56700_VIBME/41-119,(Q93CG1_PHOPR/42-123,(Q8D445_VIBVU/21-100,(O52767_9GAMM/48-143,Q8ECN0_SHEON/46-139)))),(Q52407_PSESP/49-132,Q8RJP4_ALTSO/32-116)))),((((Q8ETM4_OCEIH/90-183,(Q8ETM3_OCEIH/78-181,Q8ESA8_OCEIH/76-176)),SUBV_BACSU/56-143),O74989_SCHPO/4-74),(((O64481_ARATH/20-126,((P93221_LYCES/24-114,Q43546_LILLO/42-132),(Q9SA75_ARATH/35-138,(Q94EF5_ORYSA/93-156,(Q9FI12_ARATH/37-146,Q9SUN6_ARATH/39-159))))),O48798_ARATH/23-68),((((O64495_ARATH/26-112,Q8LSS2_ORYSA/34-106),(Q8S1N3_ORYSA/25-107,(Q9LPD1_ARATH/24-102,((O04678_LYCES/25-114,Q9LWA3_LYCES/32-115),((Q8H047_ORYSA/31-113,Q8RVC2_ORYSA/31-120),((Q9LRF2_ORYSA/37-127,Q8LIH3_ORYSA/42-126),Q942V0_ORYSA/52-137)))))),(((Q40764_PICAB/27-107,((Q9LJ20_ORYSA/29-119,((Q9FIF8_ARATH/31-109,(Q9FGU4_ARATH/2-81,((Q9FGU3_ARATH/33-112,Q9STF6_ARATH/33-112),Q9FIM5_ARATH/33-113))),Q940D5_CUCMR/32-110)),(Q9LNU0_ARATH/30-105,(Q93WQ0_SOYBN/39-115,Q9LNU1_ARATH/34-108)))),(((O65757_CICAR/45-122,Q9C8W7_ARATH/48-125),Q40540_TOBAC/11-88),((((((Q9C7U8_ARATH/36-116,Q9C7U9_ARATH/39-119),((Q8GUK4_ARATH/40-120,Q9SVT4_ARATH/38-131),((Q9LYH9_ARATH/36-113,Q9ZSB0_ARATH/28-108),((Q9MAP5_ARATH/31-111,Q9MAP7_ARATH/28-108),Q9SZY2_ARATH/21-101)))),(O81899_ARATH/1046-1126,O81899_ARATH/366-446)),(Q9FVC7_ORYSA/30-110,Q8S1I0_ORYSA/103-172)),(((Q9AX30_ORYSA/27-108,Q9FK76_ARATH/25-106),Q8H0H9_TOBAC/27-109),((Q9LLL8_ARATH/36-115,Q9LZS6_ARATH/33-113),((Q8S896_ARATH/30-116,Q9FJF3_ARATH/22-108),Q8H4X8_ORYSA/17-103)))),Q8H8B4_ORYSA/11-91))),Q9AX11_ORYSA/52-126)),((((Q9ZUF6_ARATH/28-102,(O49607_ARATH/26-99,Q9C5N5_ARATH/26-103)),(((Q94H95_ORYSA/35-111,P93204_LYCES/29-105),O65351_ARATH/30-106),(P93205_LYCES/30-117,Q9FLI4_ARATH/35-120))),(Q9FHA4_ARATH/23-101,(O82006_LYCES/33-120,Q38708_ALNGL/33-113))),Q9LVJ1_ARATH/31-110))))),(AEP_YARLI/66-147,(((Q96W31_CANAL/75-158,(PRTB_YEAST/181-280,YSP3_YEAST/69-168)),((((Q8J077_TRISH/33-119,Q9UW97_TRIRU/35-121),Q8NID9_TRIRU/35-119),((((((ALP_CEPAC/31-109,SMP1_MAGPO/32-112),ALP_TRIHA/34-113),((((ORYZ_ASPOR/35-121,ORYZ_ASPFU/35-121),(ORYZ_ASPFL/35-121,Q00208_EMENI/34-120)),Q00206_ASPNG/35-121),((Q96UF5_METAN/33-116,Q8TFD7_METAN/32-109),Q8TGV7_TOLIN/42-124))),Q8J0D8_MICCA/36-123),(((Q9URR2_PENCH/34-115,Q8NKG0_PENCH/34-115),Q8J0D9_MICCA/33-116),Q8J0D7_MICCA/34-116)),(ISP6_SCHPO/84-177,Q00226_ARTOL/38-122))),(YLP1_SCHPO/78-162,((Q96TI0_9PEZI/42-144,Q96UU6_OPHFL/42-148),(((O42797_PODAN/42-137,SPM1_MAGGR/42-137),(Q8X0Y8_METAN/43-138,(Q8WZP0_PYRBR/46-141,(PEPC_ASPNG/42-136,(Q9HF04_PENCH/42-136,(Q9HF12_9EURO/42-135,Q9Y755_PENCI/42-136)))))),Q96UU0_OPHPI/36-128))))),Q9NHN3_9EUKA/36-113))),((Q96VM1_BEABA/34-97,Q02291_9HYPO/34-99),((PRTK_TRIAL/38-105,(O14410_METAN/36-103,(Q8TGV6_TOLIN/39-106,Q8TGH4_METAN/42-109))),((Q96UG0_METAN/37-104,(Q8TFB2_9HYPO/39-106,Q96TH9_METAN/10-77)),((O74236_FUSOX/37-108,Q9P8E6_CEPAC/39-106),Q9HFL7_METAN/19-85))))),(((PROA_VIBAL/56-135,Q8GB52_9VIBR/52-131),(Q9KVI8_VIBCH/51-131,(Q93RG8_9GAMM/38-118,Q9F486_ALTSO/36-116))),((AQL1_THEAQ/53-127,Q9RS04_DEIRA/88-175),((YBG3_NEUCR/24-94,P87203_AGABI/36-101),(Q9K3X9_STRCO/56-127,Q9X2W7_9GAMM/30-109))))),PCSK9_MOUSE/79-155,PCSK9_HUMAN/76-152);
((((((((Q8SQJ3_ENCCU/17-93:1.21259,Q8RBJ2_THETN/79-146:1.24279):0.39848,(((Q9RW57_DEIRA/47-126:0.77035,(((Q9KWR4_BACPU/41-108:0.45290,SUBT_BACLI/38-105:0.27874):0.12616,O87655_BACSU/38-107:0.19324):0.13313,(SUBE_BACSU/33-95:0.77681,((Q45466_BACSP/35-103:0.42324,Q45467_BACSP/37-103:0.46010):0.04219,(Q45523_BACSP/40-102:0.48702,((ELYA_BACHD/29-93:0.47972,((O66153_BACSP/33-111:0.27033,ELYA_BACAO/33-111:0.10795):0.31895,Q45522_BACSP/32-113:0.27381):0.25568):0.34064,Q9KF13_BACHD/34-100:0.47809):0.20139):0.35294):0.31365):0.16583):0.13547):0.25922,((Q45669_9BACI/38-100:1.04020,YCT5_YEAST/18-91:1.12551):0.25981,Q9L705_9MICO/50-136:0.47575):0.32606):0.12449,(P97097_9BACI/49-117:0.75693,(Q56365_9BACL/37-106:0.22549,Q9S3Y3_BACTU/38-108:0.58279):0.45714):0.41702):0.25939):0.02429,((SUBF_BACSU/67-178:0.37470,Q8ENZ2_OCEIH/87-198:0.28265):0.85245,((Q56700_VIBME/41-119:0.68316,(Q93CG1_PHOPR/42-123:0.71680,(Q8D445_VIBVU/21-100:0.40327,(O52767_9GAMM/48-143:0.40066,Q8ECN0_SHEON/46-139:0.42870):0.44760):0.19613):0.10869):0.18295,(Q52407_PSESP/49-132:0.76582,Q8RJP4_ALTSO/32-116:0.57646):0.51400):0.39687):0.12552):0.26793,((((Q8ETM4_OCEIH/90-183:0.22822,(Q8ETM3_OCEIH/78-181:0.57521,Q8ESA8_OCEIH/76-176:0.58676):0.32751):0.70127,SUBV_BACSU/56-143:0.58594):0.61887,O74989_SCHPO/4-74:0.60882):0.22324,(((O64481_ARATH/20-126:0.39527,((P93221_LYCES/24-114:0.40303,Q43546_LILLO/42-132:0.19173):0.62722,(Q9SA75_ARATH/35-138:0.37201,(Q94EF5_ORYSA/93-156:0.19086,(Q9FI12_ARATH/37-146:0.18537,Q9SUN6_ARATH/39-159:0.32037):0.16061):0.25353):0.85461):0.08658):0.33269,O48798_ARATH/23-68:0.53204):0.42601,((((O64495_ARATH/26-112:0.80340,Q8LSS2_ORYSA/34-106:0.74572):0.29078,(Q8S1N3_ORYSA/25-107:0.58336,(Q9LPD1_ARATH/24-102:1.04439,((O04678_LYCES/25-114:0.35774,Q9LWA3_LYCES/32-115:0.34345):0.28474,((Q8H047_ORYSA/31-113:0.33747,Q8RVC2_ORYSA/31-120:0.18962):0.69118,((Q9LRF2_ORYSA/37-127:1.04531,Q8LIH3_ORYSA/42-126:0.44218):0.17747,Q942V0_ORYSA/52-137:0.79062):0.11676):0.28033):0.18733):0.15922):0.18644):0.18112,(((Q40764_PICAB/27-107:0.47619,((Q9LJ20_ORYSA/29-119:0.74345,((Q9FIF8_ARATH/31-109:0.46716,(Q9FGU4_ARATH/2-81:0.14493,((Q9FGU3_ARATH/33-112:0.16255,Q9STF6_ARATH/33-112:0.19262):0.01054,Q9FIM5_ARATH/33-113:0.11270):0.07010):0.17995):0.20292,Q940D5_CUCMR/32-110:0.42727):0.23867):0.10486,(Q9LNU0_ARATH/30-105:0.37909,(Q93WQ0_SOYBN/39-115:0.35113,Q9LNU1_ARATH/34-108:0.33631):0.07066):0.27415):0.10407):0.09673,(((O65757_CICAR/45-122:0.15797,Q9C8W7_ARATH/48-125:0.09643):0.06059,Q40540_TOBAC/11-88:0.12637):0.40175,((((((Q9C7U8_ARATH/36-116:0.24304,Q9C7U9_ARATH/39-119:0.28056):0.11868,((Q8GUK4_ARATH/40-120:0.02441,Q9SVT4_ARATH/38-131:0.03905):0.10146,((Q9LYH9_ARATH/36-113:0.22168,Q9ZSB0_ARATH/28-108:0.15256):0.07377,((Q9MAP5_ARATH/31-111:0.10918,Q9MAP7_ARATH/28-108:0.10623):0.00334,Q9SZY2_ARATH/21-101:0.12479):0.08714):0.13396):0.04394):0.12128,(O81899_ARATH/1046-1126:0.39861,O81899_ARATH/366-446:0.37534):0.01035):0.12102,(Q9FVC7_ORYSA/30-110:0.11819,Q8S1I0_ORYSA/103-172:0.28422):0.45526):0.09153,(((Q9AX30_ORYSA/27-108:0.39021,Q9FK76_ARATH/25-106:0.27839):0.30810,Q8H0H9_TOBAC/27-109:0.54115):0.07584,((Q9LLL8_ARATH/36-115:0.48025,Q9LZS6_ARATH/33-113:0.48842):0.10481,((Q8S896_ARATH/30-116:0.30267,Q9FJF3_ARATH/22-108:0.33057):0.20195,Q8H4X8_ORYSA/17-103:0.34920):0.42849):0.18429):0.05763):0.12645,Q8H8B4_ORYSA/11-91:0.77333):0.11606):0.07932):0.14748,Q9AX11_ORYSA/52-126:1.46832):0.17916):0.04604,((((Q9ZUF6_ARATH/28-102:0.67965,(O49607_ARATH/26-99:0.43427,Q9C5N5_ARATH/26-103:0.43206):0.16406):0.13022,(((Q94H95_ORYSA/35-111:0.34908,P93204_LYCES/29-105:0.30924):0.20010,O65351_ARATH/30-106:0.20979):0.16753,(P93205_LYCES/30-117:0.50768,Q9FLI4_ARATH/35-120:0.20694):0.38132):0.11092):0.10659,(Q9FHA4_ARATH/23-101:0.76819,(O82006_LYCES/33-120:0.34051,Q38708_ALNGL/33-113:0.36085):0.19131):0.27635):0.02991,Q9LVJ1_ARATH/31-110:0.65834):0.25585):0.18526):0.57608):0.10646):0.00416,(AEP_YARLI/66-147:1.32697,(((Q96W31_CANAL/75-158:0.73769,(PRTB_YEAST/181-280:0.39892,YSP3_YEAST/69-168:0.61826):0.27988):0.47776,((((Q8J077_TRISH/33-119:0.00000,Q9UW97_TRIRU/35-121:0.15647):0.50166,Q8NID9_TRIRU/35-119:0.33802):0.15558,((((((ALP_CEPAC/31-109:0.15335,SMP1_MAGPO/32-112:0.50991):0.03040,ALP_TRIHA/34-113:0.24134):0.13901,((((ORYZ_ASPOR/35-121:0.11969,ORYZ_ASPFU/35-121:0.21721):0.03862,(ORYZ_ASPFL/35-121:0.31121,Q00208_EMENI/34-120:0.27388):0.03843):0.09713,Q00206_ASPNG/35-121:0.23385):0.37357,((Q96UF5_METAN/33-116:0.56810,Q8TFD7_METAN/32-109:0.57841):0.03731,Q8TGV7_TOLIN/42-124:0.70600):0.06918):0.04733):0.08885,Q8J0D8_MICCA/36-123:0.81002):0.16504,(((Q9URR2_PENCH/34-115:0.22275,Q8NKG0_PENCH/34-115:0.08346):0.55354,Q8J0D9_MICCA/33-116:0.65148):0.04550,Q8J0D7_MICCA/34-116:0.47373):0.16305):0.11698,(ISP6_SCHPO/84-177:1.12993,Q00226_ARTOL/38-122:0.95733):0.13438):0.19708):0.16898,(YLP1_SCHPO/78-162:0.86536,((Q96TI0_9PEZI/42-144:0.42799,Q96UU6_OPHFL/42-148:0.56714):0.15968,(((O42797_PODAN/42-137:0.20875,SPM1_MAGGR/42-137:0.16052):0.15303,(Q8X0Y8_METAN/43-138:0.31356,(Q8WZP0_PYRBR/46-141:0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