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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05922 phylogeny
for nucleotide alignment


 
((((((Q9LLL8_ARATH/36-115,((((Q9FIF8_ARATH/31-109,(((Q9FGU4_ARATH/2-81,Q9FIM5_ARATH/33-113),Q9FGU3_ARATH/33-112),Q9STF6_ARATH/33-112)),Q940D5_CUCMR/32-110),(((Q40764_PICAB/27-107,Q8H0H9_TOBAC/27-109),((((Q9LJ20_ORYSA/29-119,((((((O49607_ARATH/26-99,((Q9ZUF6_ARATH/28-102,Q9LVJ1_ARATH/31-110),Q9C5N5_ARATH/26-103)),(((Q94H95_ORYSA/35-111,P93204_LYCES/29-105),O65351_ARATH/30-106),(P93205_LYCES/30-117,Q9FLI4_ARATH/35-120))),((Q9LPD1_ARATH/24-102,(O04678_LYCES/25-114,Q9LWA3_LYCES/32-115)),(Q9FHA4_ARATH/23-101,(O82006_LYCES/33-120,Q38708_ALNGL/33-113)))),(O74989_SCHPO/4-74,O64495_ARATH/26-112)),((((((PRTK_TRIAL/38-105,(Q8TGH4_METAN/42-109,(Q8TGV6_TOLIN/39-106,O14410_METAN/36-103))),(Q96UG0_METAN/37-104,(Q8TFB2_9HYPO/39-106,Q96TH9_METAN/10-77))),(Q96VM1_BEABA/34-97,Q02291_9HYPO/34-99)),((O74236_FUSOX/37-108,Q9P8E6_CEPAC/39-106),Q9HFL7_METAN/19-85)),(((PCSK9_MOUSE/79-155,PCSK9_HUMAN/76-152),(((PROA_VIBAL/56-135,Q8GB52_9VIBR/52-131),(Q9KVI8_VIBCH/51-131,(Q93RG8_9GAMM/38-118,Q9F486_ALTSO/36-116))),Q8SQJ3_ENCCU/17-93)),(((YBG3_NEUCR/24-94,P87203_AGABI/36-101),((AQL1_THEAQ/53-127,Q9RS04_DEIRA/88-175),Q9X2W7_9GAMM/30-109)),(((((YLP1_SCHPO/78-162,((Q96TI0_9PEZI/42-144,Q96UU6_OPHFL/42-148),((O42797_PODAN/42-137,SPM1_MAGGR/42-137),((Q8X0Y8_METAN/43-138,(Q8WZP0_PYRBR/46-141,(PEPC_ASPNG/42-136,(Q9HF04_PENCH/42-136,(Q9HF12_9EURO/42-135,Q9Y755_PENCI/42-136))))),Q96UU0_OPHPI/36-128)))),(ISP6_SCHPO/84-177,(Q96W31_CANAL/75-158,(PRTB_YEAST/181-280,YSP3_YEAST/69-168)))),(((Q8J077_TRISH/33-119,Q9UW97_TRIRU/35-121),Q8NID9_TRIRU/35-119),Q00226_ARTOL/38-122)),((((Q9URR2_PENCH/34-115,Q8NKG0_PENCH/34-115),Q8J0D9_MICCA/33-116),Q8J0D7_MICCA/34-116),((((((ORYZ_ASPFL/35-121,Q00206_ASPNG/35-121),(ORYZ_ASPOR/35-121,ORYZ_ASPFU/35-121)),Q00208_EMENI/34-120),((Q96UF5_METAN/33-116,Q8J0D8_MICCA/36-123),(ALP_CEPAC/31-109,(ALP_TRIHA/34-113,SMP1_MAGPO/32-112)))),Q8TFD7_METAN/32-109),Q8TGV7_TOLIN/42-124))),(AEP_YARLI/66-147,Q9NHN3_9EUKA/36-113))))),(((P97097_9BACI/49-117,(Q56365_9BACL/37-106,Q9S3Y3_BACTU/38-108)),(((Q52407_PSESP/49-132,Q8RJP4_ALTSO/32-116),((Q8RBJ2_THETN/79-146,Q45669_9BACI/38-100),(Q93CG1_PHOPR/42-123,(((O52767_9GAMM/48-143,Q8ECN0_SHEON/46-139),Q56700_VIBME/41-119),Q8D445_VIBVU/21-100)))),(((((SUBE_BACSU/33-95,(((((ELYA_BACHD/29-93,((O66153_BACSP/33-111,ELYA_BACAO/33-111),Q45522_BACSP/32-113)),Q9KF13_BACHD/34-100),Q45523_BACSP/40-102),Q45466_BACSP/35-103),Q45467_BACSP/37-103)),Q9KWR4_BACPU/41-108),O87655_BACSU/38-107),SUBT_BACLI/38-105),Q9RW57_DEIRA/47-126))),(YCT5_YEAST/18-91,Q9L705_9MICO/50-136)))),((Q8S1N3_ORYSA/25-107,(Q9K3X9_STRCO/56-127,Q8LSS2_ORYSA/34-106)),(((Q9LRF2_ORYSA/37-127,Q8LIH3_ORYSA/42-126),Q942V0_ORYSA/52-137),(Q8H047_ORYSA/31-113,Q8RVC2_ORYSA/31-120))))),Q9AX30_ORYSA/27-108),((Q9LNU0_ARATH/30-105,Q9LNU1_ARATH/34-108),Q93WQ0_SOYBN/39-115)),((O65757_CICAR/45-122,Q9C8W7_ARATH/48-125),Q40540_TOBAC/11-88))),(((((Q9C7U8_ARATH/36-116,Q9C7U9_ARATH/39-119),((O81899_ARATH/366-446,O81899_ARATH/1046-1126),((((Q9MAP5_ARATH/31-111,Q9MAP7_ARATH/28-108),Q9SZY2_ARATH/21-101),Q9ZSB0_ARATH/28-108),Q9LYH9_ARATH/36-113))),(Q8GUK4_ARATH/40-120,Q9SVT4_ARATH/38-131)),(Q9FVC7_ORYSA/30-110,Q8S1I0_ORYSA/103-172)),((Q8S896_ARATH/30-116,Q9FJF3_ARATH/22-108),Q8H4X8_ORYSA/17-103)))),((Q9AX11_ORYSA/52-126,Q8H8B4_ORYSA/11-91),(Q9LZS6_ARATH/33-113,Q9FK76_ARATH/25-106)))),((SUBF_BACSU/67-178,Q8ENZ2_OCEIH/87-198),(SUBV_BACSU/56-143,((Q8ESA8_OCEIH/76-176,Q8ETM3_OCEIH/78-181),Q8ETM4_OCEIH/90-183)))),(O48798_ARATH/23-68,((P93221_LYCES/24-114,Q43546_LILLO/42-132),O64481_ARATH/20-126))),Q9SA75_ARATH/35-138),Q94EF5_ORYSA/93-156),Q9FI12_ARATH/37-146,Q9SUN6_ARATH/39-159);
((((((Q9LLL8_ARATH/36-115:0.38669,((((Q9FIF8_ARATH/31-109:0.28007,(((Q9FGU4_ARATH/2-81:0.11177,Q9FIM5_ARATH/33-113:0.10097):0.04872,Q9FGU3_ARATH/33-112:0.11612):0.09722,Q9STF6_ARATH/33-112:0.07162):0.18811):0.18507,Q940D5_CUCMR/32-110:0.33776):0.19627,(((Q40764_PICAB/27-107:0.41332,Q8H0H9_TOBAC/27-109:0.32956):0.07859,((((Q9LJ20_ORYSA/29-119:0.26768,((((((O49607_ARATH/26-99:0.36301,((Q9ZUF6_ARATH/28-102:0.37423,Q9LVJ1_ARATH/31-110:0.38311):0.09863,Q9C5N5_ARATH/26-103:0.30881):0.06148):0.14276,(((Q94H95_ORYSA/35-111:0.27716,P93204_LYCES/29-105:0.26833):0.13542,O65351_ARATH/30-106:0.22658):0.09463,(P93205_LYCES/30-117:0.34457,Q9FLI4_ARATH/35-120:0.15400):0.22920):0.07842):0.06555,((Q9LPD1_ARATH/24-102:0.42606,(O04678_LYCES/25-114:0.15780,Q9LWA3_LYCES/32-115:0.39218):0.42026):0.22590,(Q9FHA4_ARATH/23-101:0.51370,(O82006_LYCES/33-120:0.21887,Q38708_ALNGL/33-113:0.28454):0.10411):0.14499):0.12849):0.06974,(O74989_SCHPO/4-74:0.55159,O64495_ARATH/26-112:0.51172):0.19208):0.27681,((((((PRTK_TRIAL/38-105:0.13325,(Q8TGH4_METAN/42-109:0.38676,(Q8TGV6_TOLIN/39-106:0.10107,O14410_METAN/36-103:0.39161):0.05022):0.06862):0.09199,(Q96UG0_METAN/37-104:0.41804,(Q8TFB2_9HYPO/39-106:0.19022,Q96TH9_METAN/10-77:0.18479):0.08376):0.08223):0.03699,(Q96VM1_BEABA/34-97:0.14618,Q02291_9HYPO/34-99:0.09655):0.20777):0.04448,((O74236_FUSOX/37-108:0.26045,Q9P8E6_CEPAC/39-106:0.14323):0.05249,Q9HFL7_METAN/19-85:0.24063):0.08950):0.08378,(((PCSK9_MOUSE/79-155:0.09842,PCSK9_HUMAN/76-152:0.20859):0.48770,(((PROA_VIBAL/56-135:0.26474,Q8GB52_9VIBR/52-131:0.24163):0.16045,(Q9KVI8_VIBCH/51-131:0.18115,(Q93RG8_9GAMM/38-118:0.44310,Q9F486_ALTSO/36-116:0.17705):0.38880):0.21066):0.34490,Q8SQJ3_ENCCU/17-93:1.00476):0.17834):0.11260,(((YBG3_NEUCR/24-94:0.57308,P87203_AGABI/36-101:0.36889):0.15260,((AQL1_THEAQ/53-127:0.58443,Q9RS04_DEIRA/88-175:0.29911):0.12725,Q9X2W7_9GAMM/30-109:0.37062):0.12370):0.12103,(((((YLP1_SCHPO/78-162:0.70816,((Q96TI0_9PEZI/42-144:0.33904,Q96UU6_OPHFL/42-148:0.35956):0.16454,((O42797_PODAN/42-137:0.15682,SPM1_MAGGR/42-137:0.16078):0.05790,((Q8X0Y8_METAN/43-138:0.22079,(Q8WZP0_PYRBR/46-141:0.18950,(PEPC_ASPNG/42-136:0.16360,(Q9HF04_PENCH/42-136:0.13306,(Q9HF12_9EURO/42-135:0.08876,Q9Y755_PENCI/42-136:0.13036):0.06712):0.07085):0.12837):0.08950):0.03690,Q96UU0_OPHPI/36-128:0.27108):0.05581):0.02745):0.10018):0.13244,(ISP6_SCHPO/84-177:0.52504,(Q96W31_CANAL/75-158:0.57354,(PRTB_YEAST/181-280:0.31429,YSP3_YEAST/69-168:0.43434):0.10555):0.17539):0.27152):0.05260,(((Q8J077_TRISH/33-119:0.04862,Q9UW97_TRIRU/35-121:0.05800):0.28231,Q8NID9_TRIRU/35-119:0.16895):0.03929,Q00226_ARTOL/38-122:0.64790):0.10465):0.11529,((((Q9URR2_PENCH/34-115:0.17253,Q8NKG0_PENCH/34-115:0.10626):0.30417,Q8J0D9_MICCA/33-116:0.34236):0.09862,Q8J0D7_MICCA/34-116:0.27225):0.10769,((((((ORYZ_ASPFL/35-121:0.19400,Q00206_ASPNG/35-121:0.28120):0.06028,(ORYZ_ASPOR/35-121:0.12187,ORYZ_ASPFU/35-121:0.19826):0.02699):0.05068,Q00208_EMENI/34-120:0.18450):0.18862,((Q96UF5_METAN/33-116:0.37569,Q8J0D8_MICCA/36-123:0.40353):0.08306,(ALP_CEPAC/31-109:0.10718,(ALP_TRIHA/34-113:0.32762,SMP1_MAGPO/32-112:0.34385):0.06244):0.07928):0.00217):0.08107,Q8TFD7_METAN/32-109:0.39111):0.01234,Q8TGV7_TOLIN/42-124:0.45546):0.11641):0.06366):0.12049,(AEP_YARLI/66-147:0.66580,Q9NHN3_9EUKA/36-113:0.56044):0.11093):0.08882):0.05057):0.04115):0.14131,(((P97097_9BACI/49-117:0.47136,(Q56365_9BACL/37-106:0.23055,Q9S3Y3_BACTU/38-108:0.48388):0.17019):0.41131,(((Q52407_PSESP/49-132:0.51818,Q8RJP4_ALTSO/32-116:0.60514):0.16140,((Q8RBJ2_THETN/79-146:0.80387,Q45669_9BACI/38-100:0.32625):0.28992,(Q93CG1_PHOPR/42-123:0.40078,(((O52767_9GAMM/48-143:0.43363,Q8ECN0_SHEON/46-139:0.35636):0.27540,Q56700_VIBME/41-119:0.47954):0.21683,Q8D445_VIBVU/21-100:0.29717):0.13701):0.14594):0.09815):0.36042,(((((SUBE_BACSU/33-95:0.59051,(((((ELYA_BACHD/29-93:0.37732,((O66153_BACSP/33-111:0.19857,ELYA_BACAO/33-111:0.19299):0.18243,Q45522_BACSP/32-113:0.22225):0.19032):0.10106,Q9KF13_BACHD/34-100:0.45374):0.10399,Q45523_BACSP/40-102:0.28864):0.20731,Q45466_BACSP/35-103:0.30419):0.09579,Q45467_BACSP/37-103:0.41019):0.10217):0.14918,Q9KWR4_BACPU/41-108:0.28277):0.17811,O87655_BACSU/38-107:0.18248):0.24015,SUBT_BACLI/38-105:0.15040):0.13042,Q9RW57_DEIRA/47-126:0.55247):0.12048):0.07460):0.20065,(YCT5_YEAST/18-91:0.72987,Q9L705_9MICO/50-136:0.29893):0.18002):0.14662):0.18477):0.02798,((Q8S1N3_ORYSA/25-107:0.37687,(Q9K3X9_STRCO/56-127:0.42258,Q8LSS2_ORYSA/34-106:0.37543):0.15620):0.13293,(((Q9LRF2_ORYSA/37-127:0.43646,Q8LIH3_ORYSA/42-126:0.24732):0.08372,Q942V0_ORYSA/52-137:0.38011):0.12983,(Q8H047_ORYSA/31-113:0.26670,Q8RVC2_ORYSA/31-120:0.03629):0.22369):0.11316):0.06902):0.19490):0.13413,Q9AX30_ORYSA/27-108:0.34329):0.19392,((Q9LNU0_ARATH/30-105:0.20268,Q9LNU1_ARATH/34-108:0.35522):0.06417,Q93WQ0_SOYBN/39-115:0.26184):0.27531):0.04205,((O65757_CICAR/45-122:0.15088,Q9C8W7_ARATH/48-125:0.11652):0.08615,Q40540_TOBAC/11-88:0.11363):0.28261):0.04834):0.09459,(((((Q9C7U8_ARATH/36-116:0.20892,Q9C7U9_ARATH/39-119:0.18430):0.0505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