EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05916 - Sld5)
Synthetic lethal mutants of dpb11-1 five
(Pfam reference: accession no. PF05916)
(Interpro reference: accession no. IPR008591)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 336 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.12)
nucleotides
(available for above)
5 sequences @ 1008 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 3.14)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 336 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 5.12)