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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05902 - 4_1_CTD)
4.1 protein C-terminal domain (CTD)
(Pfam reference: accession no. PF05902)
(Interpro reference: accession no. IPR008379)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
6 sequences @ 116 aa
(ave. pairwise identity: 0.58)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.95)
nucleotides
(available for above)
5 sequences @ 348 bp
(ave. pairwise identity: 0.60)
New Hampshire format
(total tree length: 1.51)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 116 aa
(ave. pairwise identity: 0.59)
New Hampshire format
(total tree length: 1.50)