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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05868 - Rotavirus_VP7)
Rotavirus major outer capsid protein VP7
(Pfam reference: accession no. PF05868)
(Interpro reference: accession no. IPR008818)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 249 aa
(ave. pairwise identity: 0.57)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.11)
nucleotides
(available for above)
3 sequences @ 747 bp
(ave. pairwise identity: 0.59)
New Hampshire format
(total tree length: 0.94)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 249 aa
(ave. pairwise identity: 0.57)
New Hampshire format
(total tree length: 1.11)