EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05862 - IceA2)
Helicobacter pylori IceA2 protein
(Pfam reference: accession no. PF05862)
(Interpro reference: accession no. IPR008655)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
3 sequences @ 94 aa
(ave. pairwise identity: 0.75)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.46)
nucleotides
(available for above)
3 sequences @ 282 bp
(ave. pairwise identity: 0.85)
New Hampshire format
(total tree length: 0.25)
amino acids, restricted set
(corresp. to available nt seqs)
3 sequences @ 94 aa
(ave. pairwise identity: 0.75)
New Hampshire format
(total tree length: 0.46)