EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05853 alignment
(12 sequences with 984 bp)


Q92WR4_RHIME/7-279 TTGCAGGGGATTTCGATCGCGGTCGCGCCGAATGGCGGGCGCCGGACGAAGGCCGACCATCCCGCCATACCGCTGACCCCGGAAGAACTGGCGCTTACCGCACGCGACTGCCTCGATGCCGGCGCGGCGATGATCCACGTTCACGTGCGCAAGGGG---GACGGAAGCCATCTTCTCGATGCCGACGCCTACCGCGCCGCGACCGCAGCGATCCGGGCTGCCGTAGGCGATCGCATGGTGATTCAGATCACCAGCGAGGCGCTGGGC------------------...------------------------...---------ATCTATTCGCCGGGCGAGCAGATCGCCGTCGTGAAGGCGGTCCGGCCCGAGGCCGTGTCTCTGGCGCTCAGAGAGTTG---------------------------------------------------------------------------GTCCCGGACGAAACGCACGAGGCTGCCTTTGCGGATCTTCTGTCGTGGGCGGCCCGG------...------GAGAAGGTCACGCCGCAGATCATCCTCTACGATCCGGAGGAGGCGGTGCGATTGGACGGCATGCGGCGACGAGGTCTGCTTTCCCGCGACGACATTCCCGTACTTTACGTACTCGGCCGTTATACGCCGGGCCAGAGGTCCCTCCCCCGTGACCTGCTGCCTTTCCTGGCGCCGGACATGCCC------------...GCCTTCACCCATTGGAGCGTCTGCGCCTTCGGCCGTCACGAGGCGGCCTGCGTCACAGTCGCGGCGCTCCTCGGCGGCCATGTCCGTGTCGGCTTCGAAAACAATCTCTGGCTTCCGGAAGGAACCGCCGCCGGCTCCAACGCCGACCTCGTCCGCACGGTTACGGCTGCGCTTCTGCCGCTGTCGGTTCCGTTACTCCAGGGGCCGGCGCTCGCAGAGATGTTTGCCCGTATCGGT
O29058_ARCFU/4-307 GACGATGTGGTTATTGTCACGTGCGCCATAACGGGAGCGATACACACTCCGAGCATGTCCCCGTACCTGCCGGTCACACCCGACCAGATTGTGGAGGAAGCGGTGAAGGCCGCAGAGGCAGGGGCCGGAATGGTTCACATTCACGCGAGAGACCCGAAAGACGGGCGCCCCACAACGGATGTTGAGGTTTTCAGGTACATATGCAGGGAAATCAAAAAGCAG---AGCGAT---GTTGTTATTAATGTTACAACCGGAGGAGGAGGCACACTGGGAATA------...------------------------...---------------CCCGTTGAGGAGAGGGCAAAGGTCGTGCCCGCCCTGAAACCGGAAATCGCAACCTTCAACATGGGCTCCATGAACTTCGCCATTCATCCACTACTCAAAAAGTACAAGGAGTTCAAGTACGACTGGGAGCCCGAGTATCTCGAAATGACGAGGGACATAGTT---TTCAGAAACACGTTCAAGGACCTTGAGGCGCTTTCGAGAATTTTC...AAGGAGAACGACACGAAGCCGGAGCTTGAGTGCTACGACATAGGGCAGATATACAACACGGCCTTCATGTTCCACGAGGGCTACCTCGAA---CCGCCACTCAGGCTGCAGTTCATCCATGGG---ATACTCGGCGGAATTGGAACCGCTGTTGAGGATGTTCTG---TTCATGAAGCAGACGGCAGACAGGTTAATTGGCaggGAGAACTACACGTGGTCCCTTGTTGGAGCGGGCAGATTTCAGATGCCTCTCGGAACGCTTGCGGTGATAATGGGCGGTGACGTGAGAGTGGGGCTTGAGGACAGCCTTTACATTGAAAGAGGCAAGCTTGCTAAAAGCAACGCCGAGCAGGTCGAAAAAATGGTAAGGATTGTGAAGGAACTCGGAAAGAGGCCCGCAACACCTGACGAGGTGAGGGAGATACTCGGACTTAAGGGA
Q98LG3_RHILO/14-314 AAGGGCAAGGTCATCATCACCTGCGCGGTGACGGGCGCGATCCACACGCCGACCATGTCGCCCTATCTGCCGATCACCCCGGATCAGATCGCCTCCGAGGCGATCGCCGCGGCGCAGGCCGGTGCTGCGATCCTGCACCTGCATGCGCGAGACCCGGAAACCGGCAAGCCCGACCAGACGCCGGAGGCCTTCGCCCGCTTCCTGCCGCGCGTTAAGCAGGGC---ACCAAT---GCCGCCATCAACATCACCACCGGCGGCAGCCCCTACATG------------...------------------------...---------------AAGGTCGAGGAGCGCGTGCGCCCGGCCGCCCAGTTCAAGCCTGAGGTCGCCTCGCTCAATATGGGCTCGATCAATTTCGGGCTCTATCACCTCGCCGACAAATACGAGACCTTCAAGTTCGACTGGGAAAAGCCGCATCTGGAGGCGACTCGCGACCTCGTC---TTCCGCAACTCGTTCAAGGACATCGAATACATCCTTGCGACCTGC...TACGACAATGGCACGCGCTTCGAGTTCGAGTGCTACGACATTGCCCATCTCTACAACCTCTCCCACTTCGCCGATCGCGGGCTGGTGAAG---CCGCCCTTCTTCGTGCAGTCGGTGTTCGGC---CTGCTCGGCGGCATCGGCACCCATCCGGAAGACGTCGCT---CATATGAAGCGCACCGCCGACCGGTTGTTCGGC...GACCAGTTCCGCTGGTCGGTACTGGGCGCCGGCGCCAGCCAGCTGCGCATCGCCGCGCAATCGGCAGCGCTCGGCGGCAACATCCGCGTCGGGCTGGAGGACAGCCTGTGGGCCGGCAAGGGCAAGCTCGCCAAGTCGAACGCCGAACAGGTCGTGCTGGCGCGCAAAATCATCGAAGGGCTTGGCATGGAGGTGGCGACGCCGGACGAGGCGCGCGAGATCCTGTCCCTGAAAGGT
Q98NK0_RHILO/3-303 CCGCGCAAAGTCATCATCACCTGCGCCGTCACCGGCTCGGTGCACACCCCATCGATGTCGCCCTACCTGCCGGTGACCCCGGACCAGATCGCGTCGGATGCGATCGCAGCGGCCGAGGCGGGCGCCTCGATCCTGCATCTGCATGCCCGCGACCCCAAAGACGGCCGGCCGACCGCCGATCCCGACGTGTTCATGCAGTTCCTGCCGCGCATCAAGCAGGCG---ACCGAT---GCGGTGATCAACATCACCACCGGCGGTTCGTCGCTGATG------------...------------------------...---------------ACCTTGGACCAGCGACTGGCCGCCCCATTGCGCGCCGAGCCCGAAATGTGCTCGCTCAACATGGGTTCGATGAATTTCGCGCTGTTTCCGATGCTCGACAAGCCACGGGAGTGGCAGCACGAATGGGAGCCGAAGCTCCTCGAAGCCACGCGCGACACCATT---TTCAAGAACACCTTCGCCGATATGGAAGGCGTGCTCGAAAGACTGggcAAGGGTTGCGGCACGCGCTTCGAATTCGAATGCTACGATGTCGGCCATCTCTATTCGCTGGCGCATTTCCGCGACCGCGGCCTGGTGTCG---GGGCCGCTGTTCATCCAGTTCGTGCTCGGC---ATTCTGGGCGGCATCGGCGCCGATCCGGACAATCTCGTC---CATATGAAGCGCATCGCCGACAAATTGTTCGGC...GACAGCTATCAGTTCTCGGTGCTGGCCGCCGGCCGCCAGCAGATGCCGCTGATCTCGATCGCCGCGGCAATGGGCGGCAATGTCCGTGTCGGGCTTGAAGACAGTCTCTACGACGGCCGC---CAGCTTGCGAAATCCAATGCCGACCAGGTGCGCCGCATCCGTGGCATTCTCGACGGCCTGTCGCTGGAGGTTGCCACGCCGGCCGAAGCGCGTGAGATGCTGGCGCTAAAGGGT
Q8RHX2_FUSNN/2-272 ATGGAAAAATTAATAATAACTGCTGCTATATGTGGAGCAGAAGTAACAAAAGAACATAATCCTGCTGTTCCTTACACAGTTGAAGAAATTGCAAGAGAAGCTGAATCAGCATACAAAGCAGGAGCAAGTATAATTCATTTACATGTAAGAGAAGAT---GATGGAACTCCAACTCAAGATAAAGAAAGATTTAGAAAATGTATAGAAGCAATAAGAGAAAAATGTCCAGAT---GTAATAATTCAACCATCTACTGGTGGAGCAGTAGGAATG------------...------------------------...---------------ACTGATTTAGAAAGATTACAACCTACC---GAATTACATCCAGAAATGGCAACTCTTGATTGTGGAACTTGTAATTTTGGT---------------------------------------------------------------------GGAGATGAAATT---TTTGTAAACACTGAAAATACAATTAAAAATTTTGGTAAAATTCTT...ATAGAAAGAGGAGTTAAACCAGAGATAGAAGTTTTTGATAAGGGTATGATAGACTATGCTATAAGATATCAAAAACAAGGATTTATACAA---AAACCTATGCATTTTGATTTTGTATTGGGT---GTACAA------ATGTCTGCTTCTGCAAGAGATTTAGTA---TTTATGTCAGAAAGTATTCCA------------...GAAGGTTCAACTTGGACAGTTGCAGGAGTTGGAAGACATCAATTCCAAATGGCGGCCTTAGCAATAGTTATGGGAGGACATGTAAGAGTTGGTTTTGAAGATAATGTATACATAGACAAGGGAATCTTAGCAAAATCAAATGGAGAATTAGTTGAAAGAGTTGTAAGATTAGCAAAGGAGCTAGGAAGAGAAATTGCAACTCCTGATGAAGCAAGACAAATATTAAGTTTAAAAAAA
Q8RBU0_THETN/1-273 GTGGAGAAATTGATAATTACTGCGGCTATATGCGGAGCTGAGGTCACAAAGAAGCATAATCCTAATGTGCCTTATACTGTTGAGGAGATGGTGAGAGAGGCTTTATCTGCATATAACGCAGGAGCTAGCATAATTCACTTGCACGTAAGGTATGAT---GATGGTACCCCTACACAGGACAAAGAAAGATTCAGAGAAGTGATTGAAGCGATTAAAGCAAAATGCCCTGAT---GTCATAATCCAGCCTTCAACTGGTGGAGCTGTTGGCATG------------...------------------------...---------------ACTGCAGAAGAAAGGTTACAGCCGGTT---TACTTAAAGCCAGAGATGGCATCACTAGACTGTGGCACAATGAATTTTGGC---------------------------------------------------------------------GGAGATGAAATA---TTTGTAAATACAGAAAACATGATAATAGAATTTGCCACCAAGATG...AATGAACTGGGAGTGAAGCCGGAACTTGAAGTATTTGACAAAGGAATGATAGATACAGCGATAAGGCTTCACAAAAAAGGGTATATAAAG---GCTCCGATGCACTTCAATTTTGTGATGGGA---GTAAATGGCGGAATTTCAGCTGAGATGAGGGACTTTGTA---TTTCTTAAAGAAAGCATTCCT------------...CCAGGAAGCACATTTACTGCTACAGGAATAGGACGCTATGAATTCCCTGTAGCTACTATGTCTATACTTGCAGGAGGTCATGTGAGAGTTGGCTTTGAGGATAACGTATACCTCGAAAAAGGCGTTCTGGCAAAGTCCAATGGTGAGCTTGTAGAAAAAGTAGTGAGAATTGCTAGAGAGTTAGGTAGAGAAATTGCAACCCCTGATGAGGCCAGAAAAATATTAGGGTTAGAGGTG
Q92NF6_RHIME/6-299 AACCGCGAGGTGTTCATCACATGCGCCGTCACCGGCGCCGGAGACACCGTCTCGAAATCCAGCCACGTTCCGGTCACGCCGAAACAGATCGCCGAGTCGGCGATCGAGGCCGCCAAGGCGGGTGCCGCCGTCGTCCATTGTCACGTCCGCGATCCCGAGACCGGCGCGCCTGCCCGGCGGCTCGATCTCTACAGGGAAGTGACCGATCGCATCCGCTCCGCCGATATAGAC---GTGGTGCTCAATCTGACCGCCGGCATGGGCGGAGACCTCGTTTTCGGTAACgtcGAGAGCCCCTTCCCCGTCGACGAGaagGGCACGGACATGGCCGGCGCCACCGAACGCGTCGCGCATGTCGCCGAATGCCTGCCGGAAATCTGCACGCTCGACTGCGGCACGATGAATTTCTCG------------------------------------------------------------------CTGGGCGATTACGTC---ATGACCAATACGCCGTCGATGCTGCGCGAGATGGCACGGCAGATG...ACCGCACTCGGCGTGCGTCCGGAGATCGAGGCCTTCGACACCGGGCATTTGTGGTTCGCCAAGCAACTCGCCGAAGAAGGCCTGATCGAG---GATCCGGTGCTGATCCAGCTCTGCATGGGC---ATTCCGTGGGGCGCGCCGGACGATCTCAACACCTTCATG---GCCATGGTCAACAACGTGCCC------------...TCGAACTGGACCTTCTCCGCCTTCTCGATCGGCCGGAACGCCATGGCCTATCCCGCCGCCGCGGTCCTTGCCGGCGGCAACGTCCGCGTCGGCCTGGAAGACAATCTCTATGTCGGCAAGGGCCAGCTCGCG---ACCAATGCCCAGCTCGTGGAGAAAGCGGTCTCCGTCGTCGAGAGCATGGGCGCGAAGATCATCGGTCCGGAAGAGGTCCGCAGGAAGCTGAAGCTGACGAAG
Q98CR5_RHILO/2-295 AACCGTGAGGTTTTCATTACCTGTGCCGTGACCGGGTCCGGCGGTTCGCAGGATCGCTCTCCGCATGTGCCGCGTTCGCCCAAGCAGATCGCCGATTCGGCCATCGACGCGGCCAAGGCCGGCGCGGCCATCGTCCACTGCCATGTCCGCGACCCCGAGACCGGCAAGCCCAGGCGCGATGTGCATCTCTATCGCGAAGTGACCGAGCGCATCCGTGATGCGAACGTCGAT---GTCGTGCTGAACCTCACCGCCGGCATGGGCGGCGACATGGTGTTTGGCTCGccgGAAGCACCGCTGCCGCTCAACGAAaagGGCACCGACATGGGCGGCGCCACCAACCGCATGGAACATGTGCGCCAATGCCTGCCGGAAATCTGCACGCTCGACTGCGGCACTATGAACTTCGCC------------------------------------------------------------------GAAGCCGACTATGTC---ATGACCAATACGCCCGGCATGCTGCGCGCCATGGGCGGCATGATG...ACGGCGCTCGGCGTCAAGCCGGAGATCGAGGCTTTCGATACCGGCCATCTCTGGTTCGCCAAGCAGCTGGTCGAGGAAAAGGTGCTCAAT---CCCGACGCGCTGGTGCAGCTCTGCATGGGC---GTGCCGTGGGGCGCGCCCGACGATCTCAACACCTTCATG---GCCATGGTCAACAACGTGCCG------------...TCGACGTGGAACTGGTCGGCGTTCGCCATCGGCCGTAATCAGATGGCCTATGCCGCTGCGGCCGTGCTCGCCGGCGGCAATGTCCGCGTCGGTCTCGAAGACAATCTCTGGCTCGACAAGGGCGTGCTGGCC---ACCAACGCGCAACTCGTCGAGCGCGCTGCCAGCATCGTCACCAATCTCGGCGCCAGGATCCTCGGCCCGGAGGAAGTGCGCAAGAAACTCAACCTGACCAAG
Q8UJY2_AGRT5/2-294 AACCGCGACGTCTTCATAACATGCGCTGTTACCGGTTCCGGTCAAAGCCATACGAAGTCAAGTCTCGTGCCGATCACGCCAGCACAAATTGCCGATGCGTGCATCGAGGCCGCCAAGGCCGGCGCCGCCATTGCCCATGTTCATGTCCGTGACCCAGACACCGGGGCACCCTCCCGCGATCCGGCCCTTTATCGGGAAGTCGTCGAGCGTGTGCGCGCCTCCGATACTGAT---GTTGTGCTGAACCTGACGGCAGGAATGGGCGGGGATATCGTTCTCGGATCGgcgGAAGCGCCTTTACCGCTCGCGCCA...CAATCCGATCTGGTTGGCGCTACCGAACGGCTTGTGCATGTGGAAGAACTGCTTCCAGAGATTTGCACGCTCGACTGCGGAACGATGAATTTCGCG------------------------------------------------------------------GAAGCAGACTATGTG---ATGACAAATACCCCCGGCACTTTACGTGCCATGGCACGGCGTATT...CAGGCAGCTGGTGTGCGTCCGGAAATAGAGGTCTTCGATACGGGGCATCTATGGCTTGCGAAGACACTTGTCGACGAGGGCCTTATCGAT---GATCCCGTAATGATCCAGCTTTGCATGGGC---ATCCCCTACGGTGCGCCAGCCGATATCAACAGCCTCATG---GCGATGGTCAACAACATCCCG------------...CAAGGATGGACCTATTCGATGTTCTCCATCGGTCGCATGCAGCTACCATATGTTGCACAGGCGGCCCTGGCGGGCGGACATGTCCGTGTCGGTCTGGAAGATAATATCTGGCTGGACAGAGGCGTGCTCGCG---CGCAACGGCGACCTGGTCGAACGCGCAGCTACCATTCTGACGGCCATGGGCTGCCGGATACTTACCCCACAGGAGGTTCGCGAAAAGCTCAAACTGCTTCGG
Q9HTH7_PSEAE/2-293 AACCATGAAGTCATCGTCACCTGCGCGGTGACCGGCGCCGGCGATACCGTCGGCCGGCATCCGGCGATCCCGGTCACCCCGAAACAGATTGCCGAGGCCGCCATCGAGGCGGCCAGGGCCGGCGCCACCGTCGCCCACTGCCATGTCCGCGACCCCGCCACCGGCAAGCCCAGCCGCGACGTGGCGCTGTACCGCGAAGTGGTCGAGCGTATCCGCGAAAGCGACACCGAT---GTGATCATCAACCTCACCGCCGGCATGGGCGGCGACCTGGAGATCGGCAAGggcGAGCAGCCCCTGGAGTTCGGTGCC...GGCACCGACCTGGTCGGCCCGCTGGAGCGGCTCAGGCATGTCGAGGAGCTGCTGCCGGAAATCTGCACCCTGGACTGCGGCACCCTCAATTTCGGC------------------------------------------------------------------GACGGCGACTACATC---TACGTCTCCACCCCTGCGCAACTGCGCGCCGGCGCCCGGCGCATC...ACCGAGCTGGGGGTCAAGGCCGAGCTGGAAATCTTCGATACCGGCCACCTCTGGTTCGCCAAGCAGATGCTCAAGGAAGGGCTGCTGGAG---GATCCG---CTGTTCCAGATCTGCCTGGGC---ATTCCCTGGGGCGCGCCGGCCGATACCACGACCATGAAG---GCGATGGCCGACAACCTGCCG------------...CCGGGGGCGACCTGGGCCGGCTTCGGCATCGGCCGCACGCAGATGCCGATGGTCGCCCAGGCCATGTTGCTGGGCGGCAACGTGCGGGTCGGCCTGGAGGACAACATCTGGCTGGACAAGGGCGTGCCGGCG---AGCAACGGCAGCCTGGTGGAGCGCGCCATCGAGATCATCGAGCGCCTCGGCGGGCGCGCCCTGAGCCCGGCGGAAGGGCGCCGCAGGATGAACCTGAAGCCG
Q93RX4_STRCO/4-295 ACCGAGAACGTCATCATCACCTGCGCGCTCACGGGCGCCGGCGACACCGTCCGCAAAAGCCCCCACGTCCCCGTCACCCCGGAACAGATAGCCAGGAACGCCGTCGAGGCGGCCGCCGCCGGAGCGGCCGTCGTCCACATCCATGTACGCGACCCGGAGACCGGCGATCCCTCCCGCGACCCGAAGCTGTACCGGGAGGTCGTCGAGCGCGTCAAGGAGACGGGCACCGAC---GTCGTCATCAACCTCACCGCCGGCATGGGCGGCGATCTGGTCATCGACCCG...GACGATCCACTCACCCACCTGCCC...GGCACCGACCTCGTCGGCGGCCTGGAGCGCCTTCCGCACGTCGAGGACCTGCTTCCCGACATCTGCACGCTGGACTGCGGCTCGCTCAACTTCGGC------------------------------------------------------------------GACGGCTCGAACCTC---TACGTCTCCACTCCCGACATGCTGCGCGCGGGCGCGCGGCGCATC...CAGGAGCTGGGTGTGCGGCCCGAGTTGGAGATATTCGACACCGGTCAGCTCTGGTTCGCCAAGCAGTTGCTCGCCGAGGGCCTGCTCGAC---GACCCGACCGTCTTCCAGCTGTGCATGGGC---ATCCCGTGGGGCGCGCCCGCGGACCCCGGGGTCCTCCAG---TCGATGGTCGGCATGCTGCCG------------...GACGGCGCGCGTTGGGCGAGCTTCGCGCTCGGCCGGATGCAGATGCCGTGGGTCGCGCAGTCCATCCTGCTCGGCGGCCACGTCCGCGTGGGCCTGGAGGACAACCTGTACCTCGGCCGGGGCAACAAGGCG---ACCAACGCCCAGCTCGTGGAACGGGCCGTGACCCTCACCGAGTCGATGGGCGCCCGCGTCGCGACGCCGGACGAGGCCCGCGCCACCCTCGGTCTCCGGCTC
Q982J9_RHILO/2-294 AACAACGAGATATTTATCACTTGCGCCGTAACCGGCGCTGGGCCGGGGCCGCGAAAGAACTCGAACGTTCCGGTCACTCCTGCGCAGATCGCCGAAGACGTGCTTGCCGTTGCTGAGGCTGGCGCCGCTATCGCCCACGTCCATGTTCGCGATCCGGAAACGACCGAGGGATCTCGCGATGTGAAGCTGTACGCGGAAGTACTCGAGCGCGTTCGCGACAGAAACAACGAT---ATCATCATGAACATGACCGCAGGTATGGGAGGCGATTTGGTCCTCGGCTCCaatGACCCGACCCAGCCG---CAACCT...GGCACCGATCTGGTCAACCAGAAGACGCGCCTCCTTCATGTCGAAGCGTTGCGGCCAGATATCTGCACGCTTGATTGCGGTTCCTACAATGTAGGC------------------------------------------------------------------GAGGGAAACCTCGTC---TACATCTCCACGCCGGAACAAATCCGCGAAGGTGCGCAGACCATT...CGCGGGCTCGGCGTGAAGCCTGAACTTGAGGTCTTTGACCTTGGCCATCTAGACTTTGTGATGAAACTGATCGGGGAAGGCGCATTTGCC---GGTCCGGCAATGATTCAGTTCTGCCTTGGG---GTGAACTACGGAGCTCCTCCCACCACCACAGCGATGAAA---GCGATGGCGGACGCGGTT---------CGAGGG...TCGGACGTCGTCTGGTCGGCGTTCGGCGTCGGTCGGATGCAAATGCCGATGGTAGCGCAGGCAGTTCTTCTCGGCGGTAATGTACGGGTTGGTCTCGAAGACAATATCTGGCTCGACCGCGGCGTACCAGCG---ACCAATGTTTCGCTGGTGAAGCGGGCGCGTGAGATCGTGGAGCGGATGGGCGTGCGGATTATGTCCTCATCCGCAACGCGTGATCGCCTCGGCCTAGGTGCA