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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05853 alignment
(12 sequences with 328 aa)


Q92WR4_RHIME/7-279 LQGISIAVAPNGGRRTKADHPAIPLTPEELALTARDCLDAGAAMIHVHVRKG-DGSHLLDADAYRAATAAIRAAVGDRMVIQITSEALG------.--------.---IYSPGEQIAVVKAVRPEAVSLALREL-------------------------VPDETHEAAFADLLSWAAR--.--EKVTPQIILYDPEEAVRLDGMRRRGLLSRDDIPVLYVLGRYTPGQRSLPRDLLPFLAPDMP----.AFTHWSVCAFGRHEAACVTVAALLGGHVRVGFENNLWLPEGTAAGSNADLVRTVTAALLPLSVPLLQGPALAEMFARIG
O29058_ARCFU/4-307 DDVVIVTCAITGAIHTPSMSPYLPVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SD-VVINVTTGGGGTLGI--.--------.-----PVEERAKVVPALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIV-FRNTFKDLEALSRIF.KENDTKPELECYDIGQIYNTAFMFHEGYLE-PPLRLQFIHG-ILGGIGTAVEDVL-FMKQTADRLIGrENYTWSLVGAGRFQMPLGTLAVIMGGDVRVGLEDSLYIERGKLAKSNAEQVEKMVRIVKELGKRPATPDEVREILGLKG
Q98LG3_RHILO/14-314 KGKVIITCAVTGAIHTPTMSPYLPITPDQIASEAIAAAQAGAAILHLHARDPETGKPDQTPEAFARFLPRVKQG-TN-AAINITTGGSPYM----.--------.-----KVEERVRPAAQFKPEVASLNMGSINFGLYHLADKYETFKFDWEKPHLEATRDLV-FRNSFKDIEYILATC.YDNGTRFEFECYDIAHLYNLSHFADRGLVK-PPFFVQSVFG-LLGGIGTHPEDVA-HMKRTADRLFG.DQFRWSVLGAGASQLRIAAQSAALGGNIRVGLEDSLWAGKGKLAKSNAEQVVLARKIIEGLGMEVATPDEAREILSLKG
Q98NK0_RHILO/3-303 PRKVIITCAVTGSVHTPSMSPYLPVTPDQIASDAIAAAEAGASILHLHARDPKDGRPTADPDVFMQFLPRIKQA-TD-AVINITTGGSSLM----.--------.-----TLDQRLAAPLRAEPEMCSLNMGSMNFALFPMLDKPREWQHEWEPKLLEATRDTI-FKNTFADMEGVLERLgKGCGTRFEFECYDVGHLYSLAHFRDRGLVS-GPLFIQFVLG-ILGGIGADPDNLV-HMKRIADKLFG.DSYQFSVLAAGRQQMPLISIAAAMGGNVRVGLEDSLYDGR-QLAKSNADQVRRIRGILDGLSLEVATPAEAREMLALKG
Q8RHX2_FUSNN/2-272 MEKLIITAAICGAEVTKEHNPAVPYTVEEIAREAESAYKAGASIIHLHVRED-DGTPTQDKERFRKCIEAIREKCPD-VIIQPSTGGAVGM----.--------.-----TDLERLQPT-ELHPEMATLDCGTCNFG-----------------------GDEI-FVNTENTIKNFGKIL.IERGVKPEIEVFDKGMIDYAIRYQKQGFIQ-KPMHFDFVLG-VQ--MSASARDLV-FMSESIP----.EGSTWTVAGVGRHQFQMAALAIVMGGHVRVGFEDNVYIDKGILAKSNGELVERVVRLAKELGREIATPDEARQILSLKK
Q8RBU0_THETN/1-273 MEKLIITAAICGAEVTKKHNPNVPYTVEEMVREALSAYNAGASIIHLHVRYD-DGTPTQDKERFREVIEAIKAKCPD-VIIQPSTGGAVGM----.--------.-----TAEERLQPV-YLKPEMASLDCGTMNFG-----------------------GDEI-FVNTENMIIEFATKM.NELGVKPELEVFDKGMIDTAIRLHKKGYIK-APMHFNFVMG-VNGGISAEMRDFV-FLKESIP----.PGSTFTATGIGRYEFPVATMSILAGGHVRVGFEDNVYLEKGVLAKSNGELVEKVVRIARELGREIATPDEARKILGLEV
Q92NF6_RHIME/6-299 NREVFITCAVTGAGDTVSKSSHVPVTPKQIAESAIEAAKAGAAVVHCHVRDPETGAPARRLDLYREVTDRIRSADID-VVLNLTAGMGGDLVFGNvESPFPVDEkGTDMAGATERVAHVAECLPEICTLDCGTMNFS----------------------LGDYV-MTNTPSMLREMARQM.TALGVRPEIEAFDTGHLWFAKQLAEEGLIE-DPVLIQLCMG-IPWGAPDDLNTFM-AMVNNVP----.SNWTFSAFSIGRNAMAYPAAAVLAGGNVRVGLEDNLYVGKGQLA-TNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTK
Q98CR5_RHILO/2-295 NREVFITCAVTGSGGSQDRSPHVPRSPKQIADSAIDAAKAGAAIVHCHVRDPETGKPRRDVHLYREVTERIRDANVD-VVLNLTAGMGGDMVFGSpEAPLPLNEkGTDMGGATNRMEHVRQCLPEICTLDCGTMNFA----------------------EADYV-MTNTPGMLRAMGGMM.TALGVKPEIEAFDTGHLWFAKQLVEEKVLN-PDALVQLCMG-VPWGAPDDLNTFM-AMVNNVP----.STWNWSAFAIGRNQMAYAAAAVLAGGNVRVGLEDNLWLDKGVLA-TNAQLVERAASIVTNLGARILGPEEVRKKLNLTK
Q8UJY2_AGRT5/2-294 NRDVFITCAVTGSGQSHTKSSLVPITPAQIADACIEAAKAGAAIAHVHVRDPDTGAPSRDPALYREVVERVRASDTD-VVLNLTAGMGGDIVLGSaEAPLPLAP.QSDLVGATERLVHVEELLPEICTLDCGTMNFA----------------------EADYV-MTNTPGTLRAMARRI.QAAGVRPEIEVFDTGHLWLAKTLVDEGLID-DPVMIQLCMG-IPYGAPADINSLM-AMVNNIP----.QGWTYSMFSIGRMQLPYVAQAALAGGHVRVGLEDNIWLDRGVLA-RNGDLVERAATILTAMGCRILTPQEVREKLKLLR
Q9HTH7_PSEAE/2-293 NHEVIVTCAVTGAGDTVGRHPAIPVTPKQIAEAAIEAARAGATVAHCHVRDPATGKPSRDVALYREVVERIRESDTD-VIINLTAGMGGDLEIGKgEQPLEFGA.GTDLVGPLERLRHVEELLPEICTLDCGTLNFG----------------------DGDYI-YVSTPAQLRAGARRI.TELGVKAELEIFDTGHLWFAKQMLKEGLLE-DP-LFQICLG-IPWGAPADTTTMK-AMADNLP----.PGATWAGFGIGRTQMPMVAQAMLLGGNVRVGLEDNIWLDKGVPA-SNGSLVERAIEIIERLGGRALSPAEGRRRMNLKP
Q93RX4_STRCO/4-295 TENVIITCALTGAGDTVRKSPHVPVTPEQIARNAVEAAAAGAAVVHIHVRDPETGDPSRDPKLYREVVERVKETGTD-VVINLTAGMGGDLVIDP.DDPLTHLP.GTDLVGGLERLPHVEDLLPDICTLDCGSLNFG----------------------DGSNL-YVSTPDMLRAGARRI.QELGVRPELEIFDTGQLWFAKQLLAEGLLD-DPTVFQLCMG-IPWGAPADPGVLQ-SMVGMLP----.DGARWASFALGRMQMPWVAQSILLGGHVRVGLEDNLYLGRGNKA-TNAQLVERAVTLTESMGARVATPDEARATLGLRL
Q982J9_RHILO/2-294 NNEIFITCAVTGAGPGPRKNSNVPVTPAQIAEDVLAVAEAGAAIAHVHVRDPETTEGSRDVKLYAEVLERVRDRNND-IIMNMTAGMGGDLVLGSnDPTQP-QP.GTDLVNQKTRLLHVEALRPDICTLDCGSYNVG----------------------EGNLV-YISTPEQIREGAQTI.RGLGVKPELEVFDLGHLDFVMKLIGEGAFA-GPAMIQFCLG-VNYGAPPTTTAMK-AMADAV---RG.SDVVWSAFGVGRMQMPMVAQAVLLGGNVRVGLEDNIWLDRGVPA-TNVSLVKRAREIVERMGVRIMSSSATRDRLGLGA