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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05788 - Orbi_VP1)
Orbivirus RNA-dependent RNA polymerase (VP1)
(Pfam reference: accession no. PF05788)
(Interpro reference: accession no. IPR008723)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
4 sequences @ 1355 aa
(ave. pairwise identity: 0.49)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.91)
nucleotides
(available for above)
4 sequences @ 4065 bp
(ave. pairwise identity: 0.52)
New Hampshire format
(total tree length: 105.17)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 1355 aa
(ave. pairwise identity: 0.49)
New Hampshire format
(total tree length: 1.91)