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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF05753 - TRAP_beta) |
| Translocon-associated protein beta (TRAPB) |
| (Pfam reference: accession no. PF05753) |
| (Interpro reference: accession no. IPR008856) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
6 sequences @ 184 aa (ave. pairwise identity: 0.27) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 5.13) |
| nucleotides (available for above) |
5 sequences @ 552 bp (ave. pairwise identity: 0.42) |
New Hampshire format (total tree length: 3.02) |
|
amino acids, restricted set (corresp. to available nt seqs) |
5 sequences @ 184 aa (ave. pairwise identity: 0.28) |
New Hampshire format (total tree length: 4.69) |