EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05702 - Herpes_UL49_5)
Herpesvirus UL49.5 envelope/tegument protein
(Pfam reference: accession no. PF05702)
(Interpro reference: accession no. IPR008647)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
8 sequences @ 118 aa
(ave. pairwise identity: 0.32)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.92)
nucleotides
(available for above)
8 sequences @ 354 bp
(ave. pairwise identity: 0.43)
New Hampshire format
(total tree length: 4.55)
amino acids, restricted set
(corresp. to available nt seqs)
8 sequences @ 118 aa
(ave. pairwise identity: 0.32)
New Hampshire format
(total tree length: 5.92)