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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05594 - Fil_haemagg)
Haemagluttinin repeat
(Pfam reference: accession no. PF05594)
(Interpro reference: accession no. IPR008619)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
178 sequences @ 160 aa
(ave. pairwise identity: 0.17)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 182.63)
nucleotides
(available for above)
178 sequences @ 480 bp
(ave. pairwise identity: 0.34)
New Hampshire format
(total tree length: 96.63)
amino acids, restricted set
(corresp. to available nt seqs)
178 sequences @ 160 aa
(ave. pairwise identity: 0.17)
New Hampshire format
(total tree length: 182.63)