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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF05408 - Peptidase_C28) |
| Foot-and-mouth virus L-proteinase |
| (Pfam reference: accession no. PF05408) |
| (Interpro reference: accession no. IPR008739) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
4 sequences @ 257 aa (ave. pairwise identity: 0.32) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 3.13) |
| nucleotides (available for above) |
4 sequences @ 771 bp (ave. pairwise identity: 0.45) |
New Hampshire format (total tree length: 2.08) |
|
amino acids, restricted set (corresp. to available nt seqs) |
4 sequences @ 257 aa (ave. pairwise identity: 0.32) |
New Hampshire format (total tree length: 3.13) |