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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05316 - VAR1)
Mitochondrial ribosomal protein (VAR1)
(Pfam reference: accession no. PF05316)
(Interpro reference: accession no. IPR007980)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 415 aa
(ave. pairwise identity: 0.52)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 2.39)
nucleotides
(available for above)
5 sequences @ 1245 bp
(ave. pairwise identity: 0.69)
New Hampshire format
(total tree length: 1.07)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 415 aa
(ave. pairwise identity: 0.52)
New Hampshire format
(total tree length: 2.39)