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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05297 - Herpes_LMP1)
Herpesvirus latent membrane protein 1 (LMP1)
(Pfam reference: accession no. PF05297)
(Interpro reference: accession no. IPR007961)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
2 sequences @ 382 aa
(ave. pairwise identity: 0.95)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 0.06)
nucleotides
(available for above)
2 sequences @ 1146 bp
(ave. pairwise identity: 0.96)
New Hampshire format
(total tree length: 0.04)
amino acids, restricted set
(corresp. to available nt seqs)
2 sequences @ 382 aa
(ave. pairwise identity: 0.95)
New Hampshire format
(total tree length: 0.06)