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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05257 phylogeny
for nucleotide alignment


 
((((((O36168_9CAUD/1143-1262,O64293_9CAUD/1215-1334),O64282_9CAUD/1148-1267),((Q9KGZ2_STRPN/56-171,((Q9A1Y8_STRPY/46-170,Q8P309_STRP8/46-170),Q8K8Y5_STRP3/46-170)),((((((((Q938V0_STRMU/317-429,(((Q938V3_STRMU/317-429,Q938V1_STRMU/318-430),Q9AG98_STRMU/317-429),Q938V2_STRMU/318-430)),(Q8P318_STRP3/283-396,Q9A1Z8_STRPY/283-396)),Q97N55_STRPN/272-390),Q9AKA4_STRAG/327-445),Q93RG6_STRIT/107-224),((USP45_LACLC/336-459,Q9CDJ1_LACLA/331-454),Q8RQE3_9LACT/336-468)),(((Q97IW4_CLOAB/59-185,Q8PU63_METMA/59-183),(Q9L922_9STRE/6-134,Q99ZZ2_STRPY/6-134)),(((((((Q8SDT1_BPPHA/21-151,Q931W3_STAAM/21-151),Q8LTH4_9CAUD/21-151),Q9FZY4_9CAUD/21-146),O56785_9CAUD/19-145),(O56788_9CAUD/12-141,(((Q9MBN4_9CAUD/12-133,Q8SDJ9_BPPHD/12-133),(Q8NVR1_STAAW/12-133,Q931M5_STAAM/12-133)),Q99SU6_STAAN/12-133))),((Q9FZY0_9CAUD/15-141,((Q931V9_STAAM/15-148,Q8SDS7_BPPHA/24-157),((O80064_9CAUD/13-148,(Q8SDN4_9CAUD/13-148,Q8NWL7_STAAW/13-148)),Q9B0C3_9CAUD/13-148))),((Q99UM3_STAAM/238-367,Q9S684_STAAU/249-378),Q9ZNI1_STAAU/249-378))),(((((Q8P0B4_STRP8/169-296,Q99Z24_STRPY/169-296),Q8NZT3_STRP8/169-296),((Q8K7N4_STRP3/170-297,Q8K797_STRP3/170-297),Q8P1N4_STRP8/169-296)),(Q938J4_9CAUD/168-295,Q9A0M2_STRPY/168-295)),Q8K6K0_STRP3/12-151)))),((((((O54487_STACA/147-263,(Q53587_STAAU/139-255,(Q99RX4_STAAM/151-267,Q8NV83_STAAW/153-269))),Q7CCJ3_STAEP/143-257),((Q99WD8_STAAU/215-334,Q932G4_STAAM/148-267),((Q99VV6_STAAM/146-265,Q8NXR3_STAAW/146-265),(Q99WU5_STAAM/179-297,Q8NYF6_STAAW/179-297)))),(Q99VM0_STAAM/163-279,Q8NXM1_STAAW/163-279)),Q99R91_STAAM/25-143),(((((((Q99Y99_STRPY/377-498,(Q8NZK5_STRP8/389-510,Q8K5Z9_STRP3/367-488)),(((Q54707_STRPY/406-527,Q8K5P6_STRP3/414-535),Q99XU7_STRPY/413-534),Q8NZ77_STRP8/410-531)),Q9L4G7_STRTR/247-368),(Q99QZ4_STAAM/493-617,Q8NUK2_STAAW/493-617)),((Q8KKF9_9LACT/412-536,Q9CED5_LACLA/349-473),(Q8L1D1_ENTFA/243-369,Q9AL13_ENTFA/243-365))),((Q8VT15_ENTFA/289-419,Q9F1G0_ENTFA/289-419),(Q07727_STAAU/232-356,Q52271_STAAU/232-356))),Q9EZH2_STRPN/230-364))))),Q9AB82_CAUCR/49-156),((((GSP_ECOLI/39-176,Q8XBW3_ECO57/39-176),Q8XEX4_SALTI/38-175),(TRYS_CRIFA/39-173,((Q9GT49_TRYCR/31-165,Q95WL5_TRYCR/31-165),Q9GT48_TRYCR/31-165))),GSP_CRIFA/59-198)),Q8KRH3_NOCAE/60-189,Q8KI43_NOCAE/26-155);
((((((O36168_9CAUD/1143-1262:0.05505,O64293_9CAUD/1215-1334:0.02280):0.06459,O64282_9CAUD/1148-1267:0.12319):0.39153,((Q9KGZ2_STRPN/56-171:0.23987,((Q9A1Y8_STRPY/46-170:0.00000,Q8P309_STRP8/46-170:0.00301):0.00284,Q8K8Y5_STRP3/46-170:0.00000):0.41066):0.25337,((((((((Q938V0_STRMU/317-429:0.00000,(((Q938V3_STRMU/317-429:0.00000,Q938V1_STRMU/318-430:0.00000):0.00000,Q9AG98_STRMU/317-429:0.00337):0.00000,Q938V2_STRMU/318-430:0.00332):0.00847):0.15822,(Q8P318_STRP3/283-396:0.00439,Q9A1Z8_STRPY/283-396:0.00307):0.26382):0.05332,Q97N55_STRPN/272-390:0.21210):0.05946,Q9AKA4_STRAG/327-445:0.29453):0.06466,Q93RG6_STRIT/107-224:0.25445):0.23817,((USP45_LACLC/336-459:0.04749,Q9CDJ1_LACLA/331-454:0.05125):0.27390,Q8RQE3_9LACT/336-468:0.32851):0.41710):0.04837,(((Q97IW4_CLOAB/59-185:0.59832,Q8PU63_METMA/59-183:0.51047):0.26069,(Q9L922_9STRE/6-134:0.00327,Q99ZZ2_STRPY/6-134:0.00000):0.74086):0.00000,(((((((Q8SDT1_BPPHA/21-151:0.00289,Q931W3_STAAM/21-151:0.00259):0.01522,Q8LTH4_9CAUD/21-151:0.02878):0.42170,Q9FZY4_9CAUD/21-146:0.27901):0.07223,O56785_9CAUD/19-145:0.19955):0.34871,(O56788_9CAUD/12-141:0.28360,(((Q9MBN4_9CAUD/12-133:0.00618,Q8SDJ9_BPPHD/12-133:0.00300):0.00000,(Q8NVR1_STAAW/12-133:0.00000,Q931M5_STAAM/12-133:0.00000):0.00000):0.00322,Q99SU6_STAAN/12-133:0.00000):0.33400):0.13077):0.06435,((Q9FZY0_9CAUD/15-141:0.31072,((Q931V9_STAAM/15-148:0.02510,Q8SDS7_BPPHA/24-157:0.02672):0.19736,((O80064_9CAUD/13-148:0.00203,(Q8SDN4_9CAUD/13-148:0.00000,Q8NWL7_STAAW/13-148:0.00000):0.00000):0.05318,Q9B0C3_9CAUD/13-148:0.02714):0.44450):0.12508):0.20297,((Q99UM3_STAAM/238-367:0.00000,Q9S684_STAAU/249-378:0.00000):0.00000,Q9ZNI1_STAAU/249-378:0.00000):0.19046):0.27222):0.06653,(((((Q8P0B4_STRP8/169-296:0.00296,Q99Z24_STRPY/169-296:0.00000):0.03296,Q8NZT3_STRP8/169-296:0.04991):0.04329,((Q8K7N4_STRP3/170-297:0.00000,Q8K797_STRP3/170-297:0.00000):0.00000,Q8P1N4_STRP8/169-296:0.01266):0.01075):0.07774,(Q938J4_9CAUD/168-295:0.05086,Q9A0M2_STRPY/168-295:0.00000):0.08035):0.38878,Q8K6K0_STRP3/12-151:0.25619):0.39523):0.16972):0.22414):0.09082,((((((O54487_STACA/147-263:0.12188,(Q53587_STAAU/139-255:0.15712,(Q99RX4_STAAM/151-267:0.00000,Q8NV83_STAAW/153-269:0.00000):0.04089):0.07674):0.01448,Q7CCJ3_STAEP/143-257:0.16528):0.17583,((Q99WD8_STAAU/215-334:0.00000,Q932G4_STAAM/148-267:0.00286):0.24068,((Q99VV6_STAAM/146-265:0.00000,Q8NXR3_STAAW/146-265:0.00287):0.19594,(Q99WU5_STAAM/179-297:0.00000,Q8NYF6_STAAW/179-297:0.00000):0.33058):0.08389):0.06884):0.07597,(Q99VM0_STAAM/163-279:0.00000,Q8NXM1_STAAW/163-279:0.00830):0.27569):0.11740,Q99R91_STAAM/25-143:0.47701):0.12993,(((((((Q99Y99_STRPY/377-498:0.01004,(Q8NZK5_STRP8/389-510:0.00276,Q8K5Z9_STRP3/367-488:0.00291):0.00430):0.20232,(((Q54707_STRPY/406-527:0.01635,Q8K5P6_STRP3/414-535:0.00376):0.00280,Q99XU7_STRPY/413-534:0.00291):0.00552,Q8NZ77_STRP8/410-531:0.00000):0.27739):0.10387,Q9L4G7_STRTR/247-368:0.33999):0.13895,(Q99QZ4_STAAM/493-617:0.00000,Q8NUK2_STAAW/493-617:0.00579):0.34083):0.08503,((Q8KKF9_9LACT/412-536:0.07905,Q9CED5_LACLA/349-473:0.07492):0.26093,(Q8L1D1_ENTFA/243-369:0.02190,Q9AL13_ENTFA/243-365:0.06496):0.28528):0.12578):0.06373,((Q8VT15_ENTFA/289-419:0.00000,Q9F1G0_ENTFA/289-419:0.00000):0.38672,(Q07727_STAAU/232-356:0.00577,Q52271_STAAU/232-356:0.00000):0.37898):0.06608):0.10031,Q9EZH2_STRPN/230-364:0.47984):0.06518):0.06404):0.17594):0.24596):0.71694,Q9AB82_CAUCR/49-156:0.41463):0.07548,((((GSP_ECOLI/39-176:0.00285,Q8XBW3_ECO57/39-176:0.01095):0.10102,Q8XEX4_SALTI/38-175:0.13698):0.39398,(TRYS_CRIFA/39-173:0.10164,((Q9GT49_TRYCR/31-165:0.00294,Q95WL5_TRYCR/31-165:0.00489):0.02079,Q9GT48_TRYCR/31-165:0.00000):0.34020):0.27889):0.13249,GSP_CRIFA/59-198:0.56559):0.19103):0.58201,Q8KRH3_NOCAE/60-189:0.00000,Q8KI43_NOCAE/26-155:0.00000);