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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05247 - FlhD)
Flagellar transcriptional activator (FlhD)
(Pfam reference: accession no. PF05247)
(Interpro reference: accession no. IPR007911)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 109 aa
(ave. pairwise identity: 0.53)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 1.90)
nucleotides
(available for above)
4 sequences @ 327 bp
(ave. pairwise identity: 0.55)
New Hampshire format
(total tree length: 1.42)
amino acids, restricted set
(corresp. to available nt seqs)
4 sequences @ 109 aa
(ave. pairwise identity: 0.48)
New Hampshire format
(total tree length: 1.76)