EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05189 alignment
(16 sequences with 381 bp)


RTCA_PYRAB/180-277 ACTAAATATTCAAGCATAGCCAAGGTCGAGGGGATAAGCCATGCA------ACCAACTTACCTGCTCACGTCGCGGAAAGGCAGGCTAAAGCTGCAAAAGAAGAGCTCTCAAAGTTG------......GAGGTTCCAGTTAAG...ATTAAAACGGAGGTTTCAAAA---------------TCCCTAGGCCCAGGAAGTGGAATAGTCGTTTGGGCTGAAACTGATTGT------TTAAGACTCGGAGGCGATGCCCTA---...---GGAAAA------...........................---AGAGGAAAACCTGCAGAAGTGGTAGGTAAGGAAGCAGCCCAGGAATTACTAGAACAGTTGAAACCAGGT
RTCA_METTH/178-275 CTTGAGGAGTCAGAGATCCATGCTGTGAGGGGCATATCCCATTCC------AGGAACCTTCCGGTTCACGTGGCAGAGAGACAGGCTGAATCAGCCATGAAGATCCTCAGGGGGGCA------......GGTCTCGATGTTGAT...ATAATGGTCGAGGATGCATCAGGT------------CCGGTGGGGAGAGGTTCAGGCATAACACTATGGGCTGAGGGTAAT---------ACACGGCTCGGAGCAGTATCCCTT---...---GGAAAA------...........................---CCGGGTAAGAGGGCTGAGAAAGTCGGTTCAGAGGCTGCAAGGGAACTTTTAGGCTTCATAGAATCGGGG
RTCA_ARCFU/178-270 ---TACGAAAGGATTGACGAAATTGTGAGGGGCGTAAGCCACTGC------CAAAACCTTCCAGGGCATGTTGCAGAGAGGCAGGCAAGCTCCGCCAGGAACTTCTTGGAGGAGAGG------......GGGATAAGGGCGGAG...ATAAGAACAGAGGTGCTTAAG---------------GGGCTATCCACGGGAAGCGGGATAGTTCTGTGGAGCGGA------------------TACAAGGGGGGTAGTGCTCTG---...---GGGGAG------...........................---AGGGGGAAGAGGGCAGAAGTTGTTGGCCAGGAGGCTGCGGAGAGTCTCTACAGAGAGCTCATGTCGGAC
RTCA_AERPE/178-281 GTGGAGAGAGGTCCTCTGAAGGGGGTGTATGTGAGGAGCCATGCA------GTGAAGCTCCCGGGGAGCATAGCGGAGAGGCAGGCCAGGAGCGCGGCAAGCCTTGTAAGAGAGAGGCTG---......GGGGTCGACCCTATT...GTCGAGATAGAAGCCTACAAGCCCCATAGAGATCCCCACCTAGGACCAGGTACCGGGGTTCTGGTGTGGGCTGTATTCGGCGAG------ACGGTGATGGGGGGTGATAGTATA---...---GGGAAG------...........................---AAGGGTAAGCCGGCGGAGGTTGTGGGCCGGGAGGCCGCGGAGAGCCTTCTGGAGGATATGGCGACTGGC
RTCA_METJA/181-274 ATAGAACATTCTAAAAGTAACTTAGTTGAAGGAATTAGCTATGTG------CAAAATTTAGATGAGAGTATAGCAAGAAGAATGAGAAAAAAGGCAGTTGATTTATTAAACAAAGAAAAACTT......---------CTGCCCaatATAAAAATAGAATGTTCAAAG---------------GGTATTTCTACTGGAGCAGGGATAGTTTTATGGAACGATACT------------------TTAGGGGGAAGTTGTTTA---...---GGAGAG------...........................---AAAGGGTTAAGGGCGGAGATTGTTGCTGAAAGGGCGGTTAATGAGTTATTAAAGGAGAGGGAAAGTGGG
RTCA_AQUAE/198-299 ACTGAGAGAGGAGAGATTAGAAAAATTCACGTGTTTTCCGTGGCTCACGAAGAGTTAAGGGAAAGGAAAGTGGCGGAAAGGCAGGCAAAGGGAGCTATAGAAGCTCTAAAAAACTTA------......GGCTACCCTGAACCAgagGTTTACAGACAGTAC---------------GCAAACGCAAACTCAATAGGAACGAGCATAACCATCTGGCTTGAAGACACTAAA---GGAAACGTTCTCGGTGCGGATAACCTG---...---GGTAAA------...........................---AAGGGAAAGCTTGCAGAGGTTGTGGGAGCAGAGGCCGTAAAAAAATTACACGAAGACTGGAGCTCCGGT
RTC1_HUMAN/184-288 ACTGAGCGTGGCTGTGTGACTAAGATATATGGAAGAGCTTTCGTT---GCTGGTGTTTTGCCATTTAAAGTAGCAAAAGATATGGCAGCGGCAGCAGTTAGATGCATCAGAAAGGAGATCCGGgatttgTATGTTAACATCCAGcctGTTCAAGAA---------------CCTAAAGACCAAGCATTTGGCAATGGAAATGGAATAATAATTATTGCTGAGACCTCCACT---GGCTGTTTGTTTGCTGGATCATCGCTT---...---GGTAAA------...........................---CGAGGTGTAAATGCAGACAAAGTTGGAATTGAAGCTGCCGAAATGCTATTAGCAAATCTTAGACATGGT
RTC1_DICDI/218-322 GTGAATAAGGGTGAGGTGAATAGAATTGTAATCAAGTCCTATTTCACGTCGCCTAGAATATCACCATTGGTAGCAGAGAGGATGAATAACACTGCAAAGAAATTAATAAAAAAGGATTTTAAA......------AAGGTGGAT...GTTGAAACAGAGTTAATCGAT---GTGAGTAAATTTAGTTTTGGTGATGGTACATTCATTGAAATTAGGGCATACACCGACCAA---GGTTGTATATTTGGTGCAACTGGAAAT---...---GGTGCA------...........................---ATTGGTGTACCTGCTGAAAAAGTCGCAGAAGATGCTGCAAATTCTTTACTCAAAGATTTGCAAGATGGT
RCL1_YEAST/183-286 ATAGATAGGCCCATAATTTCATCGATTACCGGTGTAGCATACTCT------ACCAGAGTAAGTCCGTCGCTTGTGAATAGAATGATCGATGGTGCTAAGAAGGTATTGAAAAATCTGCAATGC......------GAAGTTAAC...ATAACGGCAGATGTCTGGAGAGGTGAAAATTCA---GGGAAGAGTCCAGGCTGGGGTATTACTTTGGTTGCTCAGTCCAAGCAGAAAGGTTGGAGTTATTTTGCAGAAGATATC---...---GGTGAT------...........................---GCAGGTTCTATACCTGAAGAACTTGGTGAAAAAGTTGCCTGTCAATTATTAGAAGAAATATCAAAGAGT
RCL1_CAEEL/181-289 CAACAAGTCGGAAAAGTTTGTAAAATTCGAGGTCAAGCATATGTT------ACTAAAGTTACACCTTCACTAGCTTATCGAATGATTGACGCTGCAAAGAAAGCAATGCATGGGTACATTTCG......------GATGTTTAT...ATTACTGTTGATCAACGGAAAGGTGATGCTGGT---GGCGCTTCTCCAGGATATGGTCTGTTCTTAACCGCCGAAACGACAGAG---GGTGTTATCTACCAAGCAGAAGCTATTTCAagaCCGAAGGGCGAATCA...........................GGAGTTCCAATTCTTCCAGAAGACATTGGAATTGAAGCCGGTCATGCTCTTCTTCAACAAATTTACATGGGA
RCL1_SCHPO/183-285 TCAGAATTTGGAAGAGTCTTCCGAATCAGAGGAATTGCTTCTTCA------ACTAGAGTATCTCCCGCTTTTGCAAATCGCTTAGTAGAATCTGCTCGCGGAGTTTTAAATCCTTTTATACCC......------GATGTTTTC...ATTTATACAGACGTTCGCCGTGGAGATGAATGT---GGTAACAGTCCTGGGTATTCTATCACTTTAGTTGCAGAAACTAATAAG---GGTTGCTCTTATGCTGCCGAGCATTGT---...---GGTGAA------...........................---GCTGGAGAAACACCAGAAGATGTTGGTTCCTTTTGCGCAAAGAAATTATTGGAAGTTATTGAATCTGGT
RCL1_HUMAN/183-290 ACAGATCCAGGAAAAATCAAACGTATTAGAGGAATGGCGTACTCT------GTACGTGTGTCACCTCAGATGGCGAACCGGATTGTGGATTCTGCAAGGAGCATCCTCAACAAGTTCATACCT......------GATATCTAT...ATTTACACAGATCACATGAAAGGAGTCAACTCT---GGGAAGTCTCCGGGCTTTGGGTTGTCACTGGTTGCTGAGACCACCAGT---GGCACCTTCCTCAGTGCTGAACTGGCC---...---TCCAACCCCCAGggc.....................cagGGAGCAGCAGTACTTCCAGAGGACCTTGGCAGGAACTGTGCCCGGCTGCTGCTGGAGGAAATCTACAGGGGT
RCL1_DROME/187-296 CAGTCACAGGGCATGGTTAAACGCATTCGGGGCACTGTTTATGCC------TGCAAAGTCTCTCCGGCGATGGCCAATCGCACCGTGGAGGCGGCTAAGGGATGCATGCTAAAGTTCCTGCCG......------GATGTCTAT...ATTTACACAGATCAGAACAAAGGCAAGATGTCG---GGTAATTCGCCCGGATTTGGCATCTGTCTGATTGCCGAGACTACGGAC---GGTGTGTGCTTCGCCGCCGATTGCTGTTCCaacACAAGAGAGGAGTCG........................gagGATACACCATCCATACCCGAGAATCTGGGCAAGGAGGTGGCACTGCGTTTGCTAGACGAGATTTATCGCGGT
RCL1_ARATH/181-298 GTAGAAGAAGGAATGGTGAAGAAGATACGTGGTACAACTTTCTCT------ACAAGAGTGACTAGTGACTTTGAACATTCCATGAGATTCGCAGCTCGTGGTATCTTTAACAATCTCTTGCCT......------GATGTTCAC...ATTTTCCAAGATCACAGAGCTGGCGCTCAGGCT---GGAAAATCTCCTGGATACGGAATATCATTGGCAGCAGAAACAACTACA---GGATGTTTCATCTCTGCAGATACAACAGTGtctTGTGAAAGACCAGACgaaactggagagctcgatgtagagaagAAAGAGAGATCGCCAGCAGAAGACACAGGAGTTGAAGTAGCTTCATGGCTTCTTCAAGAGATTGAAAAAGGT
RTC1_DROME/185-289 GTGGCTTTCGGCCGCATCAAATCGGTCAGCGGAGTGGCCTACTGC---GCCGGCCGCTTGCCGGTAAATATTGCTATTGACATGCAACAGACGGCTCAACGCGAGATACATCGTTTGTGGCCGtcccagCAGTGCAGCATCGAGccgATTAAGCATTCACGCCAGAAG---------------GCATTCCACAACGGAGCCGGCATCCTGATGACTGTCAACACGACCTCC---GACGTTGTCCTAGGTGCTTCTGCATTG---...---GGCAAA------...........................---AAGAGGATCGACGGACACGTTCTCGGCTCAGAGGCGTCGTGCCAACTGGGCGACTACATGCGCAAACAG
RTCA_PSEAE/181-277 GAGCATCCCGGCGCGGCGCTGCGGCGCCAGGCGCGGGCGCTGCTC------GCCGGGATTCCCGGGCACGTCGGCGAGCGTGAGCTGGAGAGGGTCCGCCAGCGCCTCGGTTGGAGC------......---------------...---GACGAAGAACGCCAGCTGGAGTTCCTCGCGGAGGACCAGGGGCCGGGCAACGCCCTGCTGCTGCGGATCGACTGCGAGCACATCTGCGCGACCTTCTGCGCC------TTC---...---GGCCAG------...........................---GCCGGCGTCAGCGCCGAACGGGTGGCGGAACAGGTCGCGACGCAAGCCATCGGCTGGATGGAAAGCGGC