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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05188 phylogeny
for amino acid alignment


 
((((((MSH6_SCHPO/501-655,(MSH6_DROME/391-521,MSH7_ARATH/388-542)),((MSH2_DROME/191-333,MSH2_HUMAN/143-290),(MSH2_MAIZE/144-286,(MSH2_NEUCR/134-280,(MSH2_YEAST/139-285,MSH2_SCHPO/143-302))))),(((MSH4_YEAST/104-252,MSH4_CANAL/39-182),MSH4_HUMAN/155-297),((MUTS_THEMA/118-239,(MUTS_AQUAE/124-247,MUTS_AQUPY/124-247)),((((MUTS_BACSU/125-239,MUTS_BACHD/124-241),(MUTS_LACLA/124-237,(HEXA_STRPN/126-239,MUTS_STRPY/126-239))),(MUTS_CLOAB/124-249,Q9KWX8_STAAU/125-237)),(((MSH1_SCHPO/202-332,MUTS_BORBU/120-250),((((MUTS_XYLFA/135-260,MUTS_NEIMB/127-252),(MUTS_PSEAE/128-253,((MUTS_ECO57/131-256,((MUTS_HAEIN/131-256,MUTS_PASMU/128-253),MUTS_VIBCH/136-261)),MUTS_BUCAI/134-259))),(((MUTS2_HALN1/138-265,MUTS1_HALN1/114-246),MUTS_CAUCR/144-272),(MUTS_RHIME/155-289,MUTS_RHILO/151-283))),(((MUTS_CHLMU/121-253,MUTS_CHLPN/127-259),MUTS_TREPA/122-257),MUTS_SYNY3/150-289))),MUTS_RICPR/147-277))))),(MSH3_YEAST/305-435,Q9LSB3_ARATH/273-429)),SWI4_SCHPO/233-393),MSH3_HUMAN/366-523,MSH3_MOUSE/324-481);
((((((MSH6_SCHPO/501-655:0.89886,(MSH6_DROME/391-521:1.00753,MSH7_ARATH/388-542:1.36886):0.22362):0.18709,((MSH2_DROME/191-333:0.66804,MSH2_HUMAN/143-290:0.75030):0.06528,(MSH2_MAIZE/144-286:0.78085,(MSH2_NEUCR/134-280:0.40097,(MSH2_YEAST/139-285:0.61413,MSH2_SCHPO/143-302:0.65390):0.10540):0.21782):0.36910):0.76247):0.22274,(((MSH4_YEAST/104-252:0.90765,MSH4_CANAL/39-182:1.03266):0.38977,MSH4_HUMAN/155-297:1.08144):0.48942,((MUTS_THEMA/118-239:0.91553,(MUTS_AQUAE/124-247:0.21401,MUTS_AQUPY/124-247:0.12891):1.14674):0.28640,((((MUTS_BACSU/125-239:0.76579,MUTS_BACHD/124-241:0.68549):0.21940,(MUTS_LACLA/124-237:0.38935,(HEXA_STRPN/126-239:0.30558,MUTS_STRPY/126-239:0.27109):0.27921):0.47116):0.21474,(MUTS_CLOAB/124-249:0.84343,Q9KWX8_STAAU/125-237:0.63278):0.36890):0.14040,(((MSH1_SCHPO/202-332:1.31645,MUTS_BORBU/120-250:0.87783):0.20981,((((MUTS_XYLFA/135-260:0.39846,MUTS_NEIMB/127-252:0.70738):0.12716,(MUTS_PSEAE/128-253:0.32417,((MUTS_ECO57/131-256:0.10461,((MUTS_HAEIN/131-256:0.13363,MUTS_PASMU/128-253:0.13357):0.20027,MUTS_VIBCH/136-261:0.20300):0.05577):0.14808,MUTS_BUCAI/134-259:0.62946):0.18739):0.40025):0.16423,(((MUTS2_HALN1/138-265:0.89254,MUTS1_HALN1/114-246:0.91094):0.26082,MUTS_CAUCR/144-272:0.99938):0.18448,(MUTS_RHIME/155-289:0.16883,MUTS_RHILO/151-283:0.36672):0.75342):0.19540):0.12846,(((MUTS_CHLMU/121-253:0.22766,MUTS_CHLPN/127-259:0.24214):0.56784,MUTS_TREPA/122-257:1.05097):0.22879,MUTS_SYNY3/150-289:0.72754):0.24834):0.19788):0.10725,MUTS_RICPR/147-277:0.96170):0.12467):0.03855):0.17256):0.33551):0.44856,(MSH3_YEAST/305-435:1.27164,Q9LSB3_ARATH/273-429:1.50004):0.28597):0.06244,SWI4_SCHPO/233-393:0.95034):0.52325,MSH3_HUMAN/366-523:0.08042,MSH3_MOUSE/324-481:0.14664);