EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF05139 alignment
(10 sequences with 1281 bp)


Q9X941_STRCO/31-369 ACGTTCGTCCTGGAGGCGAGTTGGAGCACCGGGTTGCGTCTGGACACCTACGTGACC.................................---------------CGCGGTCTCGGTGACCCGGAGCAGATCATGCGTGAGGAGTTCCAGGGCCAGTACGTCTTCTGG---GACACCGACGAGTACCTGGATCTCATCCGGTGGATGCGGCACTACAACGTCAGCCACCCCGGCCGG---...CCGACGCTCCGTTTCGTCGGCAACGACCTCGGCTATCCCGGGCCCGAAGCCTTCGACCAGGTCACCTCGTACGTCACCGCGCACCGGCCCGGTGTCGCCGAGCGGATCGCCACCCTGTACGCCGGGCTACGGCCTGCCCGGAGCGCGTCGGCCGGTGCCTGGATGGGGCAGCAGCTGACCAAGGACCTCGCGTCCCGCCGGGCCGAGGCCGCCCGTGCGGAGCGCGCCCTCACCCTCCTGTGCGCGTCGGGGCGGCCGCGGGGCTCC------------------------------------------GCAGGCCGGGCCTACAACTGGGCCGTC---CAGAACGCCACCGCCGTCGCCCAGAGCTTCACCGGGTAT------------------------------GCCTTTCCCGACGAGGAGTTCCCGGAGCGGATGCGCTACCGGGACCAGGCCATGGCCGACAACACCGCCTGGTGGCTGGCCCACACGAAC------GGCAGGATC------...------CTGCTCGCCTCCAACAATGGCCACGTCGCCTACACCAGCGACAACCCGCAGGAGTTTCCCGAA---------------CCGGTT---------------GGCGCGTTCCTGCGCAAGAAGCTCGGCAGGAAGTACGTGAGCGTCGGC---CTGACCTTCAGCGAGGGCAGCCTCAACGCC---...---------CTGCCCGACTTCACCGCTGGGCAGCCGCAGAAGTATGCCGTGGACCCCGCCCCGGCCGGGCACAACGAGCAC---ACCCTGGACCAGGTTCGCCATCGCGACTTCGCCCTGGACCTGCGCACCGCCCCGCCCGCGGCCCGGGCCTGGCTCGACACCGCCCGCCCCACCCGTTCCTACGGCCTGTACTGGTCCGACCAGGATCCA------------------------------------------------------------GAGACCGCCCTGGGCCGCTCCTACGACATAGTCATCCATCTGCACCGCGTC
Q9RS70_DEIRA/237-547 ACCCTCGCTTTCGAGGCCAATCCGGCGCGCGCGCAGGCGGTGCAGGCCTACATTTCA.................................---------------GGTGAGTCGGCGGACCTCACGGCGGCGGTCAACGGTCTGGGC---------TTCAGCGTGTGG---CGCACTGCCGAAATCCGCGACCTGCTGGTGTGGATGCGCGGGTACAACGCGGCGCGGGGGAGCAAA---...CCGGCCCTGAACTTCGTGGCGGTGGACATGCAGGACCCGGGG------------GGCAGCGCTGCGCTCCTGGGCACCCTGGTG------CCTGGGCTGTCAGCGGCGGCGGCCCCCTTTGCCAAACTT---------------------------------GAGCCGTATCAGATTGACGAACTGGTGAAAGACCCGGCCCAACAAAAGGCGTTCACCGAGCAGGCCGCCACGCTGCTGAAGCAGGCCAACGCCCTGAACGCGAACACGCCCCACCGCGCC---------------------------CAGGCCCAGGCGCTCGCCCGGACCGTG---CAGCAGGCGGTGCTGGCCGCCACCGGG------------------------------------------------------------------------CAGGGAACGCGCGACGACTTTATGGCCGAGAACCTGCTGGCTGTCCTGAAGGCTGACCCGCAG---GGCAAAGTG------...------ATGCTCTGGGCGCACAACAGCCACGTCAGCAAAGCGCCCGACGCTCTGGCGCAGACCGGCATG------------------------------------GGCACGCGGCTGGCGGAGGCACTTGGACGCGATTACCGCACCATCGGC---CAGACCTTTACCGGCGGCAGCATCCGGGCG---...---------------------------------------------------------ACGCTGGTGGGCCAGGAAGAGAAG---GGTATGCAGAGCGTCGCCGTGGCCCCCTCGCACCCCGACAGCCCCGAAGCTCTGGCGACGGCGCCCGCCGCCCTGGTCATGGCCGATGCGCTGAAAGTTCCCGCCGTGCGCGAGTACTTCGCCACGCCACGTCCCATTCGCGGCATCGGTCAGAGCAGCACGCCCGGCGCGATGGGCTACACC------TTCGAGGTTCTGCCCAAGAGTTACGACGTGCTGATTTTCACCGGGAAAAGT
Q9HP44_HALN1/82-426 GCGTTCGCGCTCGAAGCCAACTTCTCGGAGACGCTCGCCATCGACGACTACGTCGTC.................................---------------CACGGGGACGGCGACCCACGCGAGGCACTCGACGGCATCTAC---------TTCTGGACGTGG---AACGTCGAGAGCGTCCTCGCGCTCGTGGAGTGGCTGCGCGCGTTCAACGCCGACCGCCCCGTCGGC---...GACCGGGTTCGGTTCTTCGGCGTGGACGCCCAGTACACGCAG------------GGCGCGGTCGATGCGCTCCGCGCGTTCTTC------GACACAGTGGACCCCGCGTTCCTCGGCACCGTGCGTGGC---------------------------------AACCTCGACGAAGCCGCCGACGACGGCACCCCACCACAGCAAGACGACGCGATCGACACGCAGGTCGCCGCAGTAGACCGCCTCGCTCCTCGAATTCGGAACCGCCTCGATGCGCACCGCACCGAATACGCCGCCGAAACC------AGCGCCGACCGCGTGGCACTCGCACGA---CGGCACTGCCGCGTGCTCGAACAGGCGACCGAACGCAAA---------------CGCCACTTTCCCGACGCCCTCCGGGAGGCCGACACGCTGACCCACGCACGAGTCCGGGACGAAGCGATGGCCGAGAACGCCGAGTGGGTGCGGGAGTTCACCGGCACCGACATCCTTCCG------...---------GTCTGGGCACACGACGCGCACATCGCCCGCACCGGCCTCCAGTACGGCGAGCGCGTCCCC---------------TCGCTC---------------GGCCAGCACCTCGCCGCCCGCCACGGCGACGACTACTGGGCGATCGGG---TCCGCCTTCGCGCGCGGCGGTTTCCAGGCC---...---ATCGACACTGCCGAAGACACCGAGAACGAACTCATCGGCCACGAACTCGACGACCCGCTGGACGACACCATCGAAACG---GCGCTGGATGACGCAGTCGGCTCGCCCGCCGTGCTGTCGCTCCGACAGGCCCGAGCGGACGACCGGTTGGCCGGCTGGCTCGCCGAACGGCCCCATTTCCAGACCGGCGCAACGTTCGACCCGACCAGCCCCGCAGCCGAACTCGTCACGTACGATTACACCGTC------------------------------------------GCCTTTGACGCGCTCGCGTTCCTCCCCGAGACG
Q9P6X8_NEUCR/84-449 ATAGTCGCCTGCGAAGCCGATTGGCCTGACGCCGAGTCCATTGACCGATATGTCCGTcggcgcccagggccgggcccacgagcaacgatcGAGTCCGAAGCCGAAGCGCGGCGCGCAGGGAGAGAACCGAGCTTCATGCGGTTCCCA---------CGGTGGATGTGG---CGGAACAAGGAAACGCATGACTTTGTCGAGTGGCTGAGGTGTTGGAACAAAGGGAAAGATATGAAGAAG...GAGGCGACTGGATTCTACGGGCTGGATCTGTACAGCATGGGC------------GCATCCATGCGGGCCGTCATTGCTTATTTG------GAAGAGGTGGACAAGGACATGGCGGAGACCGCAAAACGGTGCTACTCTAGGCTG---CTTGACTGGTCTGAAGATCCGCACGAATACGGACTGGAGACGCTGGTATCCGGGGGAAAGGGTTTCAAAGGTTATGAGGAAGATGTGGTCCAGGTGCTGCAGAATTTGCTAAGTAAACGGCTCGAGTACGAACGGGCAAAGTGG------------------GATGGAGAGGAATTTCACGGAGGAGAA---CAGAATGCGAGATTGGTAAAAGATGCCGAACACTACTAT---------------AGAGCCATGTATTACGCACGCGATGAATCC---------------TGGAATCTCCGCGATACACACATGTTCGAAACCCTCCAGCGCATCCTCGACCATCGCGGCTCCCACTCAAAGGCA------...------ATTGTGTGGGCGCACAACAGCCACATTGGAGATGCCCGCGCTACGAGTATGAGCTGGTCCGCG------GATGAACTCAACGTG---------------GGACAGCTGTGCAAGGAGGCTTATGGTAAGAAGGCTTTGGCCATCGGC---TGCCTGGGATACACGGGTAAGGTTGCCGCC---...------------GCCAAACGTTGGGATGGAGACATGAGTGTTATGCATGTCAAACCAGCCTTGCCCAACAGTTATGAGAGG---CTGATGCATGATACCGGTATCAAAAACTTTGTGCTAGACCTGAGGACAAAGCACTGCGACAAGGCGTTGAGGGAAGCTTTGGTGGAGAAAAGA------------------------------CTGGAGAGGTTCATTGGGGTCATCTATGCTCCCGCGACGGAGCGACAGTCACATTACTCG------TTTGCTGTATTGCCTGAGCAGCTTGATGGCATTGCTTACTTTGATGAGACT
O53475_MYCTU/301-656 GCGGTAGCCGCCGAGGCGGACTGGCCCGACGCCTACCGGGTCAATCGGTACGTTCGC.................................GGCCTCGGCGAGGACACCAACGCTGACGAGGCGCTTAGCGGATTCGAGCGGTTTCCC---------GCCTGGATGTGG---CGCAACACCGTGGTCCGAGATTTTGTGGAATGGCTGCGCACACGCAACCAGCGCTACGAGTCGGGCGCGctgCGGCAAGCCGGCTTCTACGGTCTGGATCTTTACAGCCTGCAT------------CGGTCGATCCAAGAGGTGATCAGCTATCTC------GACAAGGTCGACCCGCGTGCGGCGGCACGGGCGCGGGCCCGGTATGCGTGCTTCGACCATGCCTGCGCCGATGACGGTCAGGCGTACGGATTCGCGGCCGCATTCGGCGCCGGT---------CCGTCGTGCGAACGTGAAGCCGTCGAGCAACTGGTCGACGTTCAGCGCAATGCCCTGGCGTATGCGCGCCAAGACGGGCTGCTT------------GCCGAGGACGAACTGTTCTACGCCCAG---CAAAACGCGCAGACGGTGCGCGACGCAGAGGTGTATTAC---------------CGGGCCATGTTCAGTGGACGCGTTACCTCG---------------TGGAACCTGCGCGACCAGCACATGGCGCAGACCCTTGGCAGTTTGCTGACGCATTTGGACCGACACCTCGATGCGCCGCCGgcgCGAATAGTGGTGTGGGCTCATAACTCCCACGTGGGTGACGCACGCGCTACCGAGGTG---TGGGCCGAC------GGGCAGCTCACCCTC---------------GGCCAGATAGTCCGTGAGCGATACGGTGACGAGTCGCGCAGCATCGGA---TTCAGCACGTACACGGGCACCGTCACCGCG---...------------GCCAGCGAATGGGGTGGTATCGCCCAACGCAAAGCGGTTCGGCCGGCACTGCACGGCAGTGTCGAGGAG---CTCTTCCACCAGACTGCAGACAGTTTCCTGGTGTCAGCGCGGCTAAGCCGCGACGCCGAAGCCCCGCTGGACGTTGTC------------CGG------------------------------TTGGGACGTGCCATCGGCGTCGTTTATCTACCGGCAACGGAACGGCAAAGTCACTACTTG------CACGTGCGGCCCGCCGACCAGTTCGACGCCATGATCCACATCGATCAGACC
O32505_DEIRA/63-383 TCGATTGCTCTGGAAAGCGACATCCTGGCGGGGCAGCGGGTCAACGCTTATGTGACG.................................---------------GGCGGCGCGGACGACCTTGAAGAGGTCATGCGGACAGGCTTC---------AGCCACGACTTTGGCCGCCGGGCCGCCAACCGCGAACTGGTGGGCTGGCTGCGCGACTTCAACGCGGGGCGCTCTGCGGAC---...GAGCAGGTGCACTTCTACGGCTTCGACCCGCCGATGGAAAACCTCTGGGCGGCGAGTCCCCGCGCCAGTCTGCTCACGCTGCAC------GCTTTGCTCGCCCGCCAGGTGCCCGCGTTGCCTGTGAGCGCCGCGACCATCGAGCGCCTGTGCGGAGACGACGCCCGCTGGGCCAATCCAGCGGCGGGAATGGACGCCGCACAGTCCATCGGCCACAGCGACGAGGCGCGGCAATTGCGGGTGCTGACCGACGACCTCCTTCACCGGCTCGAAACCGGGGCGCCGGGCCTG------------------GCCGAGCAGCCGGATTTCTGGGAGGCG---CAACTCGCCGCCCGCACCGCTGCCGGCCTGCTCCGCTAC---------------CACGCGGTGATGGCGGACCCCGCCCCGGACCGCATTGCCCGGATGCTCGCCGCGCGTGACCTGCTGATGGCCGGGCACCTGCTCGCCATTGCCGAGCGCGAGCAGCGGTGCGGGCCGACG------...------CTGGTCTTCGCCCACAACCTGCACCTGCAACGCCCGCTCAGCCGTATGAAGATGGGGGCCCAGAAGATAGGGGCTCAGACGCTCGACTGGTGGGGCGCCGGGGCGCACGTCAGCCGCCGCCTAGGCGAGCGCTACGCCTTCATCGCCAGTTATCCGGGCGCCGCAGAGGAGACTTTTCTG---...---------------------------------------GTGCCTTCTTCCGAACTCACGGAAGCTGCGGCCACCCAGTTGTCAGTCAGGGACGACGGTCAGCCCTATTCTTTTCCGTTCAAACTCTCTGACCTCCCG---------------------------------------------------------------------------------------------------------------------------------------------------------TTTCTGAACGGTGCGCTCCTCGTAGGCCAATTC
Q9A9U4_CAUCR/79-390 ACCATCCTGTTCGAGGCCAATCACTACGACTTCATGGCCCTGACCCGGACAGCGGAT.................................---------------CAAGGCGGGCGGGTCGAGCCGCGCATGATCGACGCCGCGATC---------GGCGGCGTCTGGAACCGCACGCGCGAAATCCAGCCGCTGGCCCCGTTCCTGGCGAGCCGATTGGCGGCG---------------...CGTCGGATCCGGCTGGGGGGTCTGGAC---------------------------GACCAGCTCGGCAGCTACGGGGCGCTCTAC------GCCAACGACAAGCTGCCCGATGAAGTGACCGGCTATCTGCCGTTCGAACGCCGTCAGGTTTGCCGCGAGGCGCTTCGTCGGGAGATCTACGCCGACTATGGCTCGGCCGATGGCCGCACCGGCCAGGTCCAGGACACGCTCCTAGCCTGTCTTGAGGAGGCGCGAAGCCGCCTCGCCGTCGCCGAACCCCGCAAGGCGCGGCGCGCGTTCTATCAAGAAGCCCTTCGCGCCATGACCCGGGCCGTC---CGCCGGGGCGCTTTGTCCGGGGACGCCATCACGCGCGAT---------------------------------------------------------------------CGTGACGCTGCGATGTACGAGACCTACGCCTGGTATCGCCGCACAGACGGCGAGCGCGCCAAGACC------...------ATTGTCTGGGCCGCGAATGTTCACACGGTGCGCGACGCCAGAGCCTTCGGAGCGCCGGCGGCG---------GAAGACCTGCTG---------------GGCGGACGCATCGCGCGACGCGAGGGTGGCGACGCCTTCAGCCTCGGCTTCTCGGCGGGCGGCGGAAGCTACCGCAGGAGC---...------------------------------CGGGACAGGACACAGCCCATCGAGCCTGCGCCGGCGGGGAGCCTTGAGGCGACGCTGCTCGCATCGGCCGAGGCGGACGCGATCTACGCCGATCGACGCCAGCTACGGGCCTTGGGCAAAGTTCCGGCCGCGATGAGCTATCACAAGCCAAGAACCTATGACTGGTCGCTC------------------------------------------------------------------------------------------GGCTTCGACGGCGTCGTCGTCTTCCAGCAGGAA
O31455_BACSU/100-439 GTATTGGCCTTTGAATCCGGCTTTCCTGATACAAATGCATCCTACCTTAATATGGAC.................................---------------------CAATTAACCCCTAAAAGCACGATGAAAAACTCCATT---------TACGCTGTATGG---CACACAGAAGATGTCGTCGAATTGTTTGATTACATGAAAGAGCAAAAAGAGAAAGGC------------...GATCCGCTGATCCTTACCGGTTTTGATATTCAAAGCATGAAG------------------------------------------------AATTCATTCAATGTAGCTGCGACTCAATGGGTAAAAGCGGTGGACCCTGAGAAAGCAGAGTTGCTCTCCCAATCAGAAAATGATTTTTCAACATTAGTGACAGACAGCAATACGTTTGATGAATTTTCGCAAAAGAAGGAAAAGCTTGTGAAAAACTATCAGAAGCTGATCAAGTTCACTAAAACACATGCTTCAGAGCTAAAAGAAAACCTTCCAAAAGAGCCGAAAGCTTATGAGATGTTTATG---CATTCTCTTCAGCTGAGAATTGACGTAATGGAAACATATATGCTGGAAGAAATGAAAGAAAAACTAGAGGAGTATCCGGAGAATATTGAGGATTTTTCATTCTTTATGAGAGACCGCATGATGGCTGAACAATTTCAGTGGGTAGCCGACACCCTTTATCCGAAAAAGAAAATC------...------ATTGTCTGGGGCCACAATTACCATCTACGCAAACAGAATACGAAGATGATAAAGGACTGGGTACAGCTAAACGGCCCTAACATG---------------GGTGATTATTTGCCGGAGCGGCTGAAAAAACAAACATATACGATTGGCATTTATGCTTACTCAGGTGCGAGTCTTGATAGC---...---------------------TCCGATAATAAGACTGTTAAGCCGGTTACAAGCCCGCCGCCGTCTGGGAGCCTTGAAGCT---TTGCTGAAAGCGGCGGACCGACCGGCTGTTTTTGTTGATTTTCTCCATACAAAA---------------------------------------------------------------------AACAAGAAAGGCACTTCGTGGATGTATACCCCGCGGACTGCGCTCTATTGGGGGTACATGGAAGAGCAGATGATCCTGAAGGAACAATATGACGGTGTCATTTGGCTGGAGCATATC
EREB_ECOLI/70-411 ACGTTTGCTTTTGAATTTGGTTTTGCTGAGGGTCAAATCATCAATAACTGGATACAT.................................---------------------GGACAAGGAACTGACGATGAAATAGGCAGATTCTTA---------AAACACTTCTAT---TATCCAGAAGAGCTCAAAACCACATTTCTATGGCTAAGGGAGTACAATAAAGCAGCAAAA---------...GAAAAAATCACATTTCTTGGCATTGATATACCCAGAAATGGA---------GGTTCATACTTACCAAATATGGAGATAGTGCAT------GACTTTTTTAGAACAGCGGATAAAGAAGCACTACACATTATCGATGATGCATTTAATATTGCAAAAAAGATTGATTACTTCTCCACATCACAGGCAGCCTTAAATTTACATGAGCTAACAGATTCTGAGAAATGCCGTTTAACTAGCCAATTAGCTCGAGTAAAAGTTCGCCTTGAAGCTATGGCTCCAATTCACATTGAAAAATAT------------GGGATTGATAAATATGAGACAATTCTG---CATTATGCCAACGGTATGATATACTTGGACTATAACATT---------------CAAGCTATGTCGGGCTTTATTTCAGGAGGCGGAATGCAGGGCGATATGGGTGCAAAAGACAAATACATGGCAGATTCTGTGCTGTGGCATTTAAAAAACCCACAAAGTGAGCAGAAAGTG------...------ATAGTAGTAGCACATAATGCACATATTCAAAAAACACCCATTCTGTATGATGGATTTCTAAGT---------TGCCTACCAATG---------------GGCCAAAGACTTAAAAATGCCATTGGTGATGATTATATGTCTTTAGGT---ATTACTTCTTATAGTGGGCATACTGCAGCCCTC...TATCCGGAAGTTGATACAAAATATGGTTTTCGAGTTGATAACTTCCAACTGCAGGAACCAAATGAAGGTTCTGTCGAGAAA---GCTATTTCTGGTTGTGGAGTTACTAATTCTTTTGTCTTTTTTAGAAATATTCCTGAAGATTTACAATCCATCCCGAACATGATT------------------------------------------------------------------------------------CGATTTGATTCTATTTACATGAAAGCAGAACTCGAGAAAGCTTTCGATGGAATATTTCAAATTGAAAAGTCA
EREA_ECOLI/68-398 ------------GAATGTGGGGCGATTCAGGCATCCCGGTTATCTGAATGGCTCAAC.................................---------TCAACAGCCGGTGCTCATGAACTTGAGCGATTTTCGGATACCCTGACC---------TTTTCTGTGTAT------------------GGCTCAGTGCTGATCTGGCTGAAATCATATCTCCGCGAA------TCAGGA---...AGAAAACTGCAGTTAGTCGGAATCGACTTACCCAACACCCTG------------AACCCAAGGGACGACCTAGCGCAATTGGCC------GAAATTATCCAGCTCATCGATCACCTCATGAAACCGCACGTTGATATGTTGACTCACTTGTTGGCGTCCATTGATGGCCAGTCGGCGGTTATTTCATCGGCAAAATGGGGGGAGCTAGAAACGGCTCGGCAGGAGAAAGCTATCTCAGGGGTAACCAGATTGAAGCTCCGCTTGGCGTCGCTTGCCCCCGTC---------------------------CTGAAAAAACACGTCAACAGCGATTTGTTCCGAAAAGCCTCTGATCGAATAGAGTCGATAGAGTATACG---TTGGAAACCTTGCGTATAATGAAAACTTTCTTCGATGGTACCTCTCTTGAGGGAGATACTTCCGTACGTGACTCGTATATGGCGGGCGTAGTAGATGGAATGGTTCGAGCGAATCCG---GATGTGAAGATA------...------ATTCTGCTGGCGCACAACAATCATCTACAAAAAACTCCAGTCTCCTTTTCAGGCGAGCTTACG---------GCTGTTCCCATG---------------GGGCAGCACCTCGCAGAGAGGGTG------AATTACCGTGCGATTGCA---TTCACCCATCTTGGACCCACCGTGCCGGAAATGcatTTCCCATCGCCAAAAAGTCCTCTTGGATTCTCTGTTGTGACCACGCCTGCCGATGCAATCCGTGAGGATAGTATGGAACAGTATGTCATCGACGCCTGTGGTACGGAGAATTCATGTCTGACATTGACAGATGCCCCC------------------------ATGGAAGCAAAGCGAATGCGGTCTCAAAGCGCCTCTGTA------------------------------------------------------------------------GAAACGAAATTGAGCGAGGCATTTGATGCCATCGTCTGTGTTACAAGCGCC