EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF05014 - Nuc_deoxyrib_tr)
Nucleoside 2-deoxyribosyltransferase
(Pfam reference: accession no. PF05014)
(Interpro reference: accession no. IPR007710)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
11 sequences @ 185 aa
(ave. pairwise identity: 0.25)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 10.35)
nucleotides
(available for above)
10 sequences @ 555 bp
(ave. pairwise identity: 0.38)
New Hampshire format
(total tree length: 5.98)
amino acids, restricted set
(corresp. to available nt seqs)
10 sequences @ 185 aa
(ave. pairwise identity: 0.25)
New Hampshire format
(total tree length: 10.26)