EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04986 alignment
(10 sequences with 897 bp)


T801_PSESH/155-339 GGGATTTTCGGGGCGCTGCACACCTATGGCCGGCGGCTCAACTGGCATCCCCACGTCCACCTGTCGGTGACCGCGGGCGGCCTGGATGAG............---------CAGGGC---GTCTGG---------AAAAAT------CTGTCGTTCCACAAA---GAGGCC------------------------CTGCGGCGGCGCTGGATGTGGCTGGTGCGCGATTACCTG...CTG---GGACAGCCGCTTTCGCAACTGACGATGCCGCCGCCGCTGGCCCAC...ATCCTCTGTGAAAGCGACTGG------------CGCCGTTTGATA------CTGGCCGCTGGTGGCCAGCACTGG------------------------...........................................................................------------------------CACATCCACTTGTCG...AAG................................................AAGACG---------------------------AAAAACGGCCGAAAGACCGTCAATTACCTGGGCCGCTACCTGAAAAAACCGCCCATCTCGGGCAGTCGTCTGGCGCATTACACCAACGGGGCCACGTTGAGGTTCACCTACCTGGAT---CACCGCACA............---------CAGGCCTATCAGCAGGAAACG---CTGAGCCAGGCC---------------------GACATGCTTTTCCGGGTGGTGCAGCACATCCCGGAAAAGCATTTCCGGATGATCCGGTATTTTGGTTTTCTGGCCAATCGGGTCTGCGGGCAGTACCTG
Q9AFR5_SHIFL/144-328 GGTATCTTCTGCGCCATCCACACGTATGGCCGTCGTCTCAACTGGCATCCGCATGTACATGTGTCTGTAACCTGTGGAGGTCTGAATAAG............---------CATGGT---CAGTGG---------AAAAAG------CTGAGCTTCCTGAAAGACGCGATG------------------------CGTTCGCGG---TGGATGTGGAATATGCGGCAACGGCTT...CTGAAAGCGTGGTCAGAGGGG---CTGGCGATGCCGGAGTCGTTGTCACAT...ATCACGACGGAATCACAGAGG------------AGAAGCCTGGTG------CTGAAAGCCGGAGGAAAATACTGG------------------------...........................................................................------------------------CATGTGTACATGTCG...AAA................................................AAAACG---------------------------GCCGGCGGGAGGAATACGGCGCGCTACCTGGGTCGTTATCTGAAGAAGCCGCCGATAGCGGCCTCCCGGCTGGCACATTACAACGGAGGGGCGAGCCTGAGCTTCCGTTACCTGGAC---CACAAAACG............---------GGAGAAACGGCGACGGAAACG---CTGACACAGCGT---------------------GAGCTGGTCGCGAGGCTGAAACAGCACATCCCGGAGAAGTTTTTTAAGATGGTGAGGTACTTCGGGTTCCTTGCCAACCGGGTGTGTGGAGAGAAGCTG
Y4QJ_RHISN/143-333 GGCTTCTTCGCCGTCCTGCACACCTGGGGGCAAAATCTACTGCACCATCCCCATCTGCACTGCGTCGTCCCGGGTGGCGGGTTCTCGCCG............---------GACGGCACGCAATGGATCGCCTGCAAACCC------GGCTTCTTCCTGCCGGTCCGCGTG------------------------CTCTCTCGCCTGTTCCGACGCTTGTTTCTGGAGCACCTG...GAGAAAGCCTTCGACGGCGGCAAGCTGCAGTTCTTCTCCGACTTGCGAGCC...CTCAACGAGCGCAACGCCTTC------------CGGCGCTATCTG------GCGCCGCTGCGAAAGGCCGAGTGG------------------------...........................................................................------------------------GTCGTCTTTGCCAAG...CCG................................................CCCTTC---------------------------GCCGGGCCCGAACAGGTGCTCGATTACGTCGGCCGTTATACGCACCGCGTTGCCATCTCCAACAACCGGCTCGTCGATATCGAAGAT---GGAGCGGTGCGTTTCCGCTGGAAGGAT---TATCGGCAC............------GGCGACCGGCAAAAGGTCATGACC---GTGTCGACCGAC---------------------GAATTCATCCGCCGCTTTCTGTTACACGTCCTGCCTGAGGGCTTCCACCGCATCCGCTATTACGGTTTCCTCGGCAATCGCTATCGCGAACAAAAGCTT
Q981L3_RHILO/137-327 GGGTTCTTCGCGGTGCTTCACACCTGGGGACAAAACCTCTCCCATCACCCCCATCTCCACTGCGTCGTTCCGGGTGGCGGGCTGTCGCCG............---------GACGGGAGCCGGTGGATAGAATGCCGTCCC------CGCTTCTTCCTTCCGGTGGCTGTG------------------------CTCTCGCGGCTGTTTCGTCGGCTGTTCCTGGAAGACCTG...CAGAAAGCCTTCACAGCCGGCAAGCTACGCTTCTTCTCGTCGCTGGCAGGG...CTCAGCGACGCCGCTGCCTTC------------CGGCGTCATCTG------GATCGGGTGCGCCACATCAACTGG------------------------...........................................................................------------------------GTGGTCTTCGCCAAG...GCC................................................CCCTTT---------------------------GCCGGCGCCGAGCAGGTGCTGAGCTATGTCGGACGCTACACGCACCGTGTAGCGATCGCCAACAGTCGCATCGTCGACATTGAAGAT---GGCAAGGTCCGTTTTCGGTGGAAAGAC---TATCGTGAC............------GGCGATCGGCAAAAGGTGATGACG---CTGGAGGCCGGG---------------------GAGTTCATTCGACGCTTCCTGGTCCACGTCCTGCCCGACGGGTTCAAACGCATTCGCTATTACGGGCTCCTGGGCAACCGTCATCGCAAGGAGAAGCTT
Q989G7_RHILO/143-335 GGCATCACCGCCGTCCTTCACACCTGGGGCTCGGCGATGACGCACCATCCCCACGTGCACATGATCGTGCCGGGTGGCGGCATCTCGCCG............---------GACGGAAGCCGGTGGATATCGTCGCGTCCG------GCCTTCCTGCTGCCAGTGCGCGTG------------------------CTCGGCAAGCTGTTCCGCCGCCTATTCCTCACCCGTCTG...GTCGCGCTGCACGACGCCGGCCGGGTCAGCTTCTTCGGATCGATGGCGCAC...CTCACCGACCGGCGGGCCTTC------------CTGCGCCACCTC------GCTCCCGTCAGGAGGAAGCGCTGG------------------------...........................................................................------------------------GTGGTCTACGCCAAG...GCG................................................CCCTTC---------------------------GCCGGCCCGGAGGCGGTGCTCGCCTATCTGTCGCGCTACACGCACCGGGTCGCGATCTCGAACAGCCGCCTCATTCGCCTCGACGAA---AGCGGCGTCACCTTCCGCTACAAGGAC---TATCGTCGC............GACGGCGCCGACCGGCAGCAGCTCATGACG---CTTGGCCCCGAC---------------------GAGTTCATCCGCCGCTTCCTGCTCCATGTCTTGCCAAAGGGATTCCACCGCATCCGGCATTGCGGCCTGCTCGCCGGCTCCGCTCGCAAGGCCAGCCTC
Q9X962_SALEN/172-323 GGCTCAGTGACTCTTATCCAACGCTTTGGCTCCGCGCTAAATCTCAATGTCCACTACCACATGCTGTTTCTCGATGGTGTCTATGCCGAA............---GATGACTATGGC------------------AAGCAA---------CGCTTCCATCGTGTCAAGGCA------------------------CCCACTTAC---------------------GATGAGCTG...AATACG------------------------------------CTCGCTCACaccCTCAGCCATCGCATCGCTCGCTGCATGGAAAAGCGTGGGATTTTG------GAGCGTGATGCCGAGAATACGTGG------------------------...........................................................................------------------------TTG------------...---................................................---ACA---------------------CTGGAAGAGGGCGAAGACGATACGCTGACTCAATTA---------------------------------------------CAT---------GGTGCTTCGGTTACGTATCGCATTGCCGTC---GGCCCCCAG............---------CAAGGGCGCAAAGTCTTCACC---CTGCAAACCTTGCCAGGGCGTGAGGATAAAGCCGACTCAAGCAGTCGAGTAGCCAACCAT---------GCTGGTTTCTCGCTA------CACGCCGGTGTGATGGCCGAAGCGCATCAGCGGATAAGCTTG
Q9F8W1_ECOLI/171-395 GGCGCGGTCACCCTGATCCAGCGTTTTGGATCGGCGCTCAATCTGAATGTTCACTTCCACATGCTGTTTCTCGACGGTGTGTATGTCGAG............---CAATCCCACGGC---------------------TCA------GCGCGTTTCCGCTGGGTCAAGGCGCCGACCACCCCAGAGCTCACCCAGCTGACGCACACCATCGCCCACCGGGTGGGTCGCTATCTG...GAACGG---------CAAGGC------------------------------...---CTGCTGGAACGGGATGTC---GAA------AACAGCTATCTGGCCTCGGATGCGGTGGATGACGACCCGATGACACCCCTGCTGGGGCACTCGATCacttaccgtatcgctgtcggttcacaggcggggcgaaaggtgttcactttgcaaactctgccgaccagtggtgatCCGTTCGGTGACGGGATTGGCAAGGTA------------...GCC................................................GGGTCCAGCCTGCACGCCGGCGTGGCGGCCAGGGCCGATGAACGCAAGAAGCTCGAACGGCTGTGCCGGTACATCAGCCGCCCGGCGGTATCCGAGAAGCGGCTGTCGTTAACACGAGGC---GGCAACGTGCGCTACCAGCTCAAGACGCCGTACCGGGAC............---------GGCACCACGCACGTCATTTTC------GAACCATTG---------------------GATTTCATTGCAAGGCTGGCCGCCCTGGTACCGAAGCCCAGAGTCAACCTAACCCGCTTCCACGGGGTGTTCGCACCC---------AACAGTCGGCAC
Q9ADT3_9ENTR/163-390 GGCGCGGTGACGCTGATCCAGCGTTTCGGCAGCGCGCTGAACCTGAACATCCACTTCCACATGCTGTGGCTCGACGGCGTGTACGTGGAA............------GCCACCGAG---CTGCCG------CGGCGCGAA------CTGCGCCTGCACCGCGCCCGTGCGCCCACCACCGCGCAGTTGACCCAGCTGGCAGCTACCATCGCGCACCGGGTGTGTCGGCACCTGacgCGCAAAGGCTGGCTCGAAGGG------------------------------...---GAGGGCGAATCGGCCTTCCTGGCA------GACAGCGCTGCAGGCGACGACAGCATGGATGGGCTGCGGATGAGTTCGATCACCTACCGCATCGCC...........................................................................ACCGGCCGCGACGCTGGCTGCAAGGTCGTCACGCTGCAA...ACGctgcccggtgacgccggttcgctggagggcgaagccggcaaggtcggcGGCTTCTCACTGCATGCCGGCGTGGCGGCCGAAGCACACGAAAGCCACAAGCTGGAAAAGCTGTGCCGCTACATCACGCGCCCGGCGATCAGCGAGAAGCGGCTGTCGATAGCGCTCCAG---GGCAGGGTGCGTTACCAGCTCAAGACCCCGTGGCGCAAT............---------GGCACCACGCATGTGGAATGG------GATCCGGTG---------------------GATTTCATCGCCAAGCTGGCGGCGCTGGTCCCGCCACCTCGCGCGCATCTCACCCGCTTCCACGGCGTATTCGCCCCG---------AATGCAAACCTG
Q9RDU8_PSEPV/69-255 GGTGCGGTGGCTTTCATCCATCGTTTCGGCTCGTCGCTGAACGAGCATGTGCATTTCCATTGCTGTGTCATCGACGGGGTGTTCGAGCCG............GCTGAGATGGACGGCGCCACCGAGGCGAACGCCACGCCC---GGCGTGGTGTTTCATGCGGCGACCGAG------------------------CTGGATCCGGAGGCCATCGCCGCAGTGCAGGCGCAGGCG...CGGCGG---------------------------------------------...---CGCATCCTGCGCACTTTCGTGCGA------CGCGGGTTGATC------GAGAAGTGCGACGCGGAAGAGATG------------------------...........................................................................------------------------GCCGGCTGGGAACACggcGGC................................................GGCTTCTCGGTGGATGCCGCGGTGCGCATCGAAGGCAATGACCGGGCAGGACTGGAACGGCTGCTGCGTTACTGCGCCCGGCCGCCCTTCGCCCTCGAACATCTACACCAAAGCGATGCC---GAGCATCTGGTCTATCACTGTCCCAAG---CCACGCCCC............---------GACGGCCCCCGTGATCTGGTG---CTGACGCCGCTG---------------------GAGCTGATCGACCGGATCGCCGCTCTGGTACCACGGCCACGTACGCATCGCCATCGCTACTACGGCGTGCTGGCGCCC---------AATGCACCGCTG
O52215_PSEPS/174-369 GGTGCCATCGCCTTCATTCACCGATTCGGCTCCAGCCTCAATGAACACGTCCACTTCCACGTTTGTGTGGTGGACGGGGTGTTTGAGGAAgtggagggcgagGGCGATGCTGATGCG---ACCCCTCGAATCTCATCGCCG---GGTGTCATCTTTCACGCGGCCACCGGC------------------------ATCGATGCGGCTACCGTGGCCCCAGTGCAGACCACACTG...CAAAAA---------------------------------------------...---CGCATCCTGCGCGCCTTCGTTGCT------CGGGGCCTGCTG------GAGAACTGTGACGCCAAAGACATG------------------------...........................................................................------------------------CTGGGCTACAAACAC...AGC................................................GGCTTCTCGGTGGACGCCGGTGTCTGCATCGAAGCCCACGACCGCGCTGCGCTGGAGCGGCTGCTGCGCTATTGCGCGCGTCCACCGTTTTCCATGGAGCGCCTACGCAAA---GAGGGA---AGCAAACTGGTGTACCGCTGTGCCAAA---CAGCGCAGCgagcccaccagtGACAAGCGTGGTGCCAAGGCAGATGAGCTGCACCTCACACCGCTG---------------------GAACTGATCGACCGCATCGCCGCGCTGGTGCCACCGCCACGCACCCACCGGCACCGCTACTTTGGTGTGCTGGCACCA---------AACTCGCCGCTG