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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04888 - SseC)
Secretion system effector C (SseC) like family
(Pfam reference: accession no. PF04888)
(Interpro reference: accession no. IPR006972)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
5 sequences @ 491 aa
(ave. pairwise identity: 0.26)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 5.19)
nucleotides
(available for above)
5 sequences @ 1473 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 3.21)
amino acids, restricted set
(corresp. to available nt seqs)
5 sequences @ 491 aa
(ave. pairwise identity: 0.26)
New Hampshire format
(total tree length: 5.19)