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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04879 phylogeny
for restricted amino acid alignment


 
(((((((((((Q9WX89_CLOPE/1-55,(Q9EYG2_AMYMD/1-49,Q9L2E6_STRCO/11-63)),((NASC_BACSU/19-75,Q9KF71_BACHD/18-76),Q9UYM9_PYRAB/3-58)),(Q97ZA1_SULSO/1-55,(((FDHA_METFO/3-57,Q50569_METTF/3-57),(Q9C4B5_METVO/4-58,(Y006_METJA/1-55,Q50514_METTF/1-56))),(((((Q98BW9_RHILO/260-314,(O87815_ALCEU/243-297,Q9EZD3_RHIME/248-302)),(Q99RW4_STAAN/257-311,(O05397_BACSU/265-319,Q9HL15_THEAC/277-331))),(((NUOG2_RHIME/217-271,(Q9HM26_THEAC/34-85,Q97CU9_THEVO/1-52)),NUOG_PSEAE/221-275),Q9ZBV9_STRCO/230-284)),P77908_MOOTH/221-275),FDHF_ECOLI/1-54)))),(((((FDNG_ECOLI/43-104,O67146_AQUAE/46-107),(O29065_ARCFU/38-91,Q9V0J3_PYRAB/5-55)),Q9PMF2_CAMJE/50-104),((NARB_SHEFR/1-62,(((NARB_SYNP7/16-82,(((Q44289_ANASP/2-68,(Q51328_9CYAN/2-68,Q9EYN5_SYNPW/25-91)),Q9R6U4_SYNP2/3-60),Q9RA37_9CYAN/1-67)),NARB_SYNY3/7-68),((Q9I2W3_PSEAE/7-61,Q9AAI1_CAUCR/8-63),(Q98HH7_RHILO/1-52,NASA_KLEOX/1-55)))),Q9KJ87_PSEPU/3-57)),(((((NAPA_ALCEU/41-95,(NAPA_PARPN/41-95,Q9I4G3_PSEAE/36-90)),NAPA_ECOLI/39-93),Q9PPD9_CAMJE/35-89),NAPA_DESDE/38-91),O27595_METTH/197-251))),(Q9I0C8_PSEAE/6-60,Q9L212_STRCO/4-58)),((Q98BE3_RHILO/40-92,O67280_AQUAE/44-98),((O30286_ARCFU/39-93,Q97XX8_SULSO/63-121),(PHSA_SALTY/41-95,PSRA_WOLSU/44-98)))),(YYAE_BACSU/2-57,O34323_BACSU/11-64)),O30061_ARCFU/39-96),Q9HR74_HALN1/53-108),Q9X6B6_YERPE/65-125),DMSA_HAEIN/47-107,YNFE_ECOLI/49-108);
(((((((((((Q9WX89_CLOPE/1-55:0.69378,(Q9EYG2_AMYMD/1-49:0.36940,Q9L2E6_STRCO/11-63:0.44230):0.60763):0.25151,((NASC_BACSU/19-75:0.39053,Q9KF71_BACHD/18-76:0.35986):0.47939,Q9UYM9_PYRAB/3-58:0.92724):0.41003):0.14440,(Q97ZA1_SULSO/1-55:0.76217,(((FDHA_METFO/3-57:0.06985,Q50569_METTF/3-57:0.34369):0.18908,(Q9C4B5_METVO/4-58:0.20614,(Y006_METJA/1-55:0.15968,Q50514_METTF/1-56:0.50202):0.26070):0.12455):0.24797,(((((Q98BW9_RHILO/260-314:0.00000,(O87815_ALCEU/243-297:0.13607,Q9EZD3_RHIME/248-302:0.16943):0.12372):0.70211,(Q99RW4_STAAN/257-311:0.08079,(O05397_BACSU/265-319:0.16013,Q9HL15_THEAC/277-331:0.14240):0.09278):0.38274):0.20884,(((NUOG2_RHIME/217-271:0.40976,(Q9HM26_THEAC/34-85:0.25154,Q97CU9_THEVO/1-52:0.00000):0.67159):0.20385,NUOG_PSEAE/221-275:0.94226):0.17307,Q9ZBV9_STRCO/230-284:0.39843):0.04759):0.11461,P77908_MOOTH/221-275:0.38779):0.04233,FDHF_ECOLI/1-54:0.63113):0.13087):0.01582):0.06222):0.16645,(((((FDNG_ECOLI/43-104:0.25453,O67146_AQUAE/46-107:0.25164):0.36486,(O29065_ARCFU/38-91:0.76963,Q9V0J3_PYRAB/5-55:0.58919):0.11575):0.11142,Q9PMF2_CAMJE/50-104:0.89687):0.05112,((NARB_SHEFR/1-62:0.76440,(((NARB_SYNP7/16-82:0.08223,(((Q44289_ANASP/2-68:0.12570,(Q51328_9CYAN/2-68:0.07236,Q9EYN5_SYNPW/25-91:0.51924):0.00000):0.02453,Q9R6U4_SYNP2/3-60:0.33776):0.07850,Q9RA37_9CYAN/1-67:0.19780):0.09754):0.24228,NARB_SYNY3/7-68:0.00000):0.55944,((Q9I2W3_PSEAE/7-61:0.64074,Q9AAI1_CAUCR/8-63:0.24855):0.11052,(Q98HH7_RHILO/1-52:0.23644,NASA_KLEOX/1-55:0.06608):0.09927):0.25508):0.13544):0.10345,Q9KJ87_PSEPU/3-57:0.38923):0.42229):0.01853,(((((NAPA_ALCEU/41-95:0.07193,(NAPA_PARPN/41-95:0.09958,Q9I4G3_PSEAE/36-90:0.17647):0.06722):0.09910,NAPA_ECOLI/39-93:0.19258):0.03339,Q9PPD9_CAMJE/35-89:0.19046):0.35388,NAPA_DESDE/38-91:0.28569):0.26919,O27595_METTH/197-251:0.34758):0.14243):0.15223):0.20537,(Q9I0C8_PSEAE/6-60:0.73209,Q9L212_STRCO/4-58:0.61441):0.32949):0.14559,((Q98BE3_RHILO/40-92:0.15628,O67280_AQUAE/44-98:0.30475):0.44318,((O30286_ARCFU/39-93:0.19472,Q97XX8_SULSO/63-121:0.71527):0.05123,(PHSA_SALTY/41-95:0.45173,PSRA_WOLSU/44-98:0.34399):0.44297):0.19368):0.24937):0.05519,(YYAE_BACSU/2-57:0.65288,O34323_BACSU/11-64:0.28265):0.16476):0.31337,O30061_ARCFU/39-96:0.62815):0.28292,Q9HR74_HALN1/53-108:0.48353):0.50743,Q9X6B6_YERPE/65-125:0.10021):0.06109,DMSA_HAEIN/47-107:0.08669,YNFE_ECOLI/49-108:0.22090);