EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04873 alignment
(9 sequences with 1317 bp)


Q9ZWK1_TOBAC/32-429 CAGGAGTCGGAGCCGGTGATGGATGATGATTATAGCGATGAGGAGATTGATGTGGATGAGCTGGAGAGGAGGATGTGGAGGGACAAGATGAAGCTGAAAAGGTTGAAAGAAATGACTAAGGGG---GGTAAGGAAGGTGTTGACGCTGTCAAACAACGCCAGTCT---....................................---CAGGAGCAAGCGAGGAGGAAGAAGATGTCGAGGGCACAAGACGGGATCTTGAAATACATGTTGAAGATGATGGAAGTTTGTAAAGCTCAGGGTTTTGTTTATGGAATTATCCCGGAGAAAGGGAAACCGGTTACCGGGGCATCAGATAATCTCAGGGAGTGGTGGAAGGATAAAGTGAGGTTCGATCGAAATGGACCTGCAGCCATAGCAAAGTACCAAGCTGATAATGCGATTCCGGGC---AAGAAT......GAGGGATCTAATCCGATTGGTCCTACCCCTCACACTTTGCAGGAGCTTCAAGATACCACTCTTGGCTCTTTATTATCAGCTTTGATGCAACATTGTGATCCTCCTCAGAGGCGATTTCCGTTGGAAAAAGGTGTTCCACCTCCGTGGTGGCCCACTGGACAGGAGGACTGGTGGCCTCAACTAGGCCTGTCGAAA...GAT------CAAGGTCCTCCGCCTTATAAGAAGCCTCACGATCTGAAGAAGGCGTGGAAAGTTGGTGTTCTCACCGCGGTGATAAAGCACATGTCCCCTGATATCGCTAAGATTCGTAAGCTGGTAAGGCAATCAAAGTGTTTGCAGGATAAGATGACGGCCAAGGAAAGTGCAACTTGGCTTGCCATTATCAATCAGGAGGAAGTTTTGGCTCGA......GAACTTTATCCTGATCGTTGT------CCACCTTTGTCCTCA------------------GCTGGTGGTAGTGGAACT...TTTACTATGAATTACAGCAGT---GAATACGACGTTGAC------GGTGTTGTAGATGAGCCTAAC---TTTGATGTTCAAGAG...CAAAAACCAAACCATCTCggcttgctgATGTATGTTGATCGCTTCAAGGAGAGGCTGCCTATGCAACAACAATCTCTTCCAATCAAGGAT------GAAATTATGATTGCCAACTTAGATTTCACTCGGAAGAGGAAGCCAGCGGATGAGCTGACTTTC...TTGATGGATCAGAAGATA...TATACTTGTGAGTGTCTTCAATGTCCGCACAGCGAGCTCCGCAATGGTTTTCAGGACAGATCCTCCAGAGACAATCATCAATTA
EIN3_ARATH/31-422 GCTGAGCCTGATTCCATTGTTGAAGATGACTATACTGATGATGAGATTGATGTTGATGAATTGGAGAGGAGGATGTGGAGAGACAAAATGCGGCTTAAACGTCTCAAGGAGCAGGATAAGGGT------AAAGAAGGTGTTGATGCTGCTAAACAGAGGCAGTCT---....................................---CAAGAGCAAGCTAGGAGGAAGAAAATGTCTAGAGCTCAAGATGGGATCTTGAAGTATATGTTGAAGATGATGGAAGTTTGTAAAGCTCAAGGCTTTGTTTATGGGATTATTCCGGAGAATGGGAAGCCTGTGACTGGTGCTTCTGATAATTTAAGGGAGTGGTGGAAAGATAAGGTTAGGTTTGATCGTAATGGTCCTGCGGCTATTACCAAGTATCAAGCGGAGAATAATATCCCGGGG---ATTCAT......GAAGGTAATAACCCGATTGGACCGACTCCTCATACCTTGCAAGAGCTTCAAGACACGACTCTTGGATCGCTTTTGTCTGCGTTGATGCAACACTGTGATCCTCCTCAGAGACGTTTTCCTTTGGAGAAAGGAGTTCCTCCTCCGTGGTGGCCTAATGGGAAAGAGGATTGGTGGCCTCAACTTGGTTTGCCTAAA...GAT------CAAGGTCCTGCACCTTACAAGAAGCCTCATGATTTGAAGAAGGCGTGGAAAGTCGGCGTTTTGACTGCGGTTATCAAGCATATGTTTCCTGATATTGCTAAGATCCGTAAGCTCGTGAGGCAATCTAAATGTTTGCAGGATAAGATGACTGCTAAAGAGAGTGCTACCTGGCTTGCTATTATTAACCAAGAAGAGTCCTTGGCTAGA......GAGCTTTATCCCGAGTCATGT------CCACCTCTTTCT------------------CTGTCTGGTGGAAGTTGCTCG...CTTCTGATGAATGATTGCAGT---CAATACGATGTTGAA------GGTTTCGAGAAGGAGTCTCAC---TATGAAGTGGAAGAG...CTCAAGCCAGAAAAAGTT.........------ATGAATTCTTCAAACTTTGGGATGGTTGCTAAAATGCATGACTTTCCTGTCAAAGAA------GAAGTCCCAGCAGGAAACTCGGAATTCATGAGAAAGAGAAAGCCAAACAGAGATCTGAACACT...ATTATGGACAGAACCGTT...TTCACCTGCGAGAATCTTGGGTGTGCGCACAGCGAAATCAGCCGGGGATTTCTGGATAGGAATTCGAGAGACAACCATCAACTG
EIL1_ARATH/31-431 GAACAAGAACCTGTAGTTGAAGATGTCGACTACACCGATGATGAGATGGATGTGGATGAGCTTGAGAAGAGGATGTGGAGAGACAAAATGCGTTTGAAACGTCTCAAGGAGCAACAGAGTAAG---TGTAAAGAAGGCGTCGATGGTTCGAAACAGAGGCAGTCG---....................................---CAAGAGCAAGCTAGGAGGAAGAAAATGTCTAGAGCCCAAGATGGGATCTTGAAGTATATGTTGAAGATGATGGAAGTTTGTAAAGCTCAAGGCTTTGTTTATGGTATTATTCCTGAGAAGGGTAAGCCTGTGACTGGTGCTTCGGATAATTTGAGGGAATGGTGGAAAGATAAGGTTAGGTTTGATCGTAATGGTCCAGCTGCTATTGCTAAGTATCAGTCAGAGAATAATATTTCTGGAGGGAGTAAT......GATTGTAACAGCTTGGTTGGTCCAACACCGCATACGCTTCAGGAGCTTCAGGACACGACTCTTGGTTCGCTTTTATCGGCTTTGATGCAACATTGTGATCCACCGCAGAGACGGTTTCCTTTGGAGAAAGGAGTTTCTCCACCTTGGTGGCCTAATGGGAATGAAGAGTGGTGGCCTCAGCTTGGTTTACCAAAT...GAG------CAAGGTCCTCCTCCTTATAAGAAGCCTCATGATTTGAAGAAAGCTTGGAAAGTCGGTGTTTTAACTGCGGTGATCAAGCATATGTCGCCGGATATTGCGAAGATCCGTAAGCTTGTGAGGCAATCAAAATGCTTGCAGGATAAGATGACGGCGAAAGAGAGTGCTACTTGGCTTGCCATTATTAACCAAGAAGAGGTTGTGGCTCGG......GAGCTTTATCCCGAGTCATGC------CCTCCTCTTTCTTCTTCT------------TCATCATTAGGAAGCGGGTCG...CTTCTCATTAATGATTGTAGC---GAGTATGACGTTGAA------GGTTTCGAGAAGGAACAACATGGTTTCGATGTGGAAGAG...CGGAAACCAGAG---ATA.........GTGATGATGCATCCTCTAGCAAGCTTTGGGGTTGCTAAAATGCAACATTTTCCCATAAAGGAG---GAGGTCGCCACCACGGTAAACTTAGAGTTCACGAGAAAGAGGAAGCAGAACAATGATATGAATGTTatgGTAATGGACAGATCAGCAggtTACACTTGTGAGAATGGTCAGTGTCCTCACAGCAAAATGAATCTTGGATTTCAAGACAGGAGTTCAAGGGACAACCACCAGATG
Q9M4R5_DIACA/30-427 GAGGTGGAGCAAGAGGGAAACGACGAGGATTACTCTGATGATGATGTTGATGTGGATGAGCTTGAGAGGAGGATGTGGAGGGATAAGATGTTGTTGAAGAGGCTTAAGGAACAGAACAAAGATAGGTGTAGGGAAGGGATTGATAACGTGAAGAAGCGTCAGTCC---....................................---CAAGAGCAAGCTCGTAGGAAGAAAATGTCTCGTGCTCAAGATGGGATTTTGAAGTACATGTTGAAGATGATGGAGGTTTGTAAGGCTCAGGGCTTTGTTTACGGGATTATCCCGGAAAAGGGGAAGCCTGTAAGCGGAGCGTCTGATAATCTTAGGGCGTGGTGGAAGGATAAAGTCAGATTTGACCGGAACGGCCCTGCTGCGATTGCAAAGTATCAAGCGGATCATTTGGTTCAGGGA---ATGGAT......GAGGACTGTACTGCGATGGGGTCCACGCCACACACGTTGCAGGAACTTCAAGACACGACGCTTGGATCTCTGTTGTCTGCTCTGATGCAGCACTGTGACCCACCGCAAAGGCGGTTTCCCTTGGAAAAGGGTCATCCTCCACCGTGGTGGCCGGTGGGTAATGAAATCCGATTGCCGGGGCTAGGTATTCCTAAT...GAT------CAGGGCCCACCCCCGTATAAAAAGCCGCATGATCTTAAGAAGGCATGGAAGGTGAGCGTTTTAACGGCTGTGATCAAGCACATGTCTCCTGATATTGAGAAGATCCGTAAGCTTGTACGTCAGTCAAAGTGCTTGCAGGATAAGATGACTGCCAAAGAAAGTGCCACGTGGCTGGCGATCGTAAATCAGGAAGAGAGCTTGGCTCGG......AAATTGTTCCCTGATCGGTGT------CCACCT---------------------CCGGCACCAGGTGGAGGCGGGTCG...TTGGTCATCAGCGATACTAGC---GACTATGATGTTGAC------GGGGCTGGCCCAGATTCCAGCAGT---GATGTCGAGGAT...TGCAAGCCACAAAACATA.........AACGTCTTCAACTTTCGAGAGAAGTTTATGGGACACCCTGTTAATATGATTACTCCTGCAATCAAGGGAGAGGTTGTCGAAACCGGTTTTGATTTCCCCGTGAAGAGGAAGCAACCGTCATCGGGATCTCAGactGTGATAGATCAGAAAGTG...TTTCTTTGCGAGAACCCACAATGCCCTTACAATGATCCTTGTTTAGGTTTTCCTGACAGGATTTTGAGGCATGATCACCAGCTT
Q9FDV5_FAGSY/21-392 TTGAGGTGTGACAACATAGCGGATAAAGATGTGAGTGATGAAGAGATTGAAGCTGAAGAATTGGAAAGGCGGATGTGGAAGGACCGTATCAAACTCAAGAGGCTTAAGGAAAGACAGAAGATTGCAGCCCAACAAGCTGCAGAGAAACAGAAGCCCAAGCAGACA---....................................---ACTGATCAGGCTCCGAGGAAGAAAATGTCCAGAGCACAGGATGGGATTCTCAAGTATATGCTGAAGCTGATGGAAGTTTGCAAAGCTCGTGGATTTGTGTATGGTATCATTCCTGAGAAGGGTAAGCCAGTGAGTGGTGCTTCTGATAACATTAGAGCTTGGTGGAAAGAAAAGGTGAGGTTTGATAAGAATGGGCCAGCAGCCATAACCAAGTATGAAGCAGAGTGCCTTGCCATGAGT---GAGGCA......GAA---AATAATCGGAATGGGAACTCTCAAAGCATTCTCCAAGATCTGCAAGATGCTACTCTTGGGTCACTTTTGTCTTCTTTAATGCAACACTGTGACCCCCCTCAAAGGAAGTACCCGCTAGAAAAGGGAGTTCCTCCGCCTTGGTGGCCAACTGGGAATGAAGATTGGTGGGTGAAGTTAGGGCTACCCCAT...GGT------CAAAGACCT---CCTTATAAGAAGCCGCATGATTTGAAGAAGATGTGGAAAGTTGGAGTATTAACAGCTGTGATCAAGCACATGTCACCCGATATTGCTAAGATAAGGAGGCATGTCCGCCAGTCGAAGTGCTTACAGGATAAGATGACAGCAAAGGAAAGTGCAATCTGGTTAGGCGTTTTGAGCAGAGAGGAAGCCCTAATTCGG......CAGCCTAGTAGTGACAATGGGACATCTGGTGTAACTGATATGCCA---------CGAGGTGGTCGTGACGAAAACAAGcgaGCTGCTGTTAGTAGTGACAGT---GACTATGATGTAGAT------GGTGTTGACGATGGTGTAAGTTCTGTGCCATCTACAGATgaaAGGAGAAATCAACCGATG.........---------------------------GATGTAGAACCTTCAGACAATCTACAGAATAACACTCCTGTCCAGGATAAAGCTCCAGGGGAAAAGCAACCTAAAAGAAAAAGAGCCCGTGTC------------...------------------...------------AGATCAAACTGC---------------------------GCTGATCAAATACCTGCTCCATCTCACAATGAA
EIL3_ARATH/20-404 TTAGCTAGTGATAATGTTGCTGAGATTGATGTGAGTGATGAAGAGATTGATGCTGACGACCTTGAGAGACGGATGTGGAAAGATCGTGTCAGGCTTAAAAGAATCAAAGAGCGACAAAAAGCTGGCTCTCAAGGAGCTCAAACGAAGGAGACACCTAAGAAAATC---....................................---TCTGATCAAGCTCAGAGGAAGAAAATGTCTAGAGCTCAAGATGGTATCCTTAAGTACATGTTGAAGCTTATGGAAGTCTGCAAAGTTCGCGGGTTTGTCTATGGTATAATACCGGAAAAGGGCAAGCCTGTGAGTGGTTCCTCTGACAATATAAGAGCTTGGTGGAAAGAGAAAGTGAAGTTTGATAAGAACGGTCCTGCTGCTATTGCTAAATACGAAGAGGAGTGTTTAGCGTTTGGG---AAATCT......GATGGGAAT---------AGGAATTCACAGTTTGTTCTCCAGGATTTGCAAGATGCTACTTTAGGGTCTTTGTTATCTTCTTTGATGCAACATTGTGATCCTCCTCAAAGGAAGTATCCGTTGGAGAAAGGGACGCCTCCGCCTTGGTGGCCAACGGGGAATGAAGAATGGTGGGTGAAACTCGGTCTGCCTAAA...AGC------CAGAGTCCT---CCTTACCGAAAACCTCATGATCTCAAGAAGATGTGGAAGGTTGGAGTTTTAACGGCAGTGATCAATCATATGTTACCTGATATTGCAAAGATTAAGAGGCATGTTCGTCAGTCGAAATGTTTACAGGACAAGATGACAGCTAAAGAGAGTGCGATTTGGTTGGCGGTTTTGAACCAAGAGGAATCTTTGATTCAG......CAGCCTAGCAGTGACAATGGAAACTCCAATGTGACTGAGACACAT------CGTAGGGGTAATAACGCTGACAGGAGGaaaCCTGTGGTCAACAGTGACAGT---GACTATGATGTTGAT------GGGACAGAGGAAGCTTCAGGTTCAGTTTCATCTAAAGACagtAGAAGAAATCAG------.........------------------------------ATTCAAAAAGAACAACCAACAGCCATCTCACATTCAGTAAGAGATCAAGATAAAGCAGAGAAACATCGCAGAAGGAAAAGACCTCGAATT------------...---------AGATCCGGAactGTCAATCGACAAGAGGAAGAACAACCTGAAGCTCAACAAAGAAACATCTTACCTGATATGAATCATGTTGATGCCCCTCTGCTA
EIL2_ARATH/30-408 GATTCGCATACGGCTTTGTGCGATGATCTGAGTAGTGATGAGGAAATGGAAATAGAGGAGCTTGAGAAGAAGATCTGGAGAGACAAGCAGCGTTTAAAGCGGCTCAAGGAAATGGCGAAGAACGGTCTAGGAACAAGATTG---TTGTTGAAGCAGCAACATGATGAT....................................TTTCCAGAGCACTCTAGTAAGAGAACCATGTACAAGGCACAAGATGGGATCTTGAAGTACATGTCGAAGACAATGGAGCGATATAAAGCTCAAGGTTTTGTTTATGGGATTGTGTTAGAGAATGGGAAAACGGTAGCGGGATCTTCTGATAATCTCCGTGAATGGTGGAAAGACAAAGTGAGGTTTGATAGGAACGGCCCAGCTGCTATAATCAAGCACCAAAGGGATATCAATCTTTCTGATGGAAGTGAT......TCAGGGTCTGAGGTTGGGGATTCTACCGCACAGAAGTTGCTTGAGCTTCAAGATACTACTCTTGGAGCTCTGTTATCGGCTCTGTTTCCTCACTGCAACCCTCCTCAGAGGCGGTTTCCGTTGGAGAAAGGCGTGACACCGCCATGGTGGCCAACGGGGAAAGAAGATTGGTGGGATCAACTGTCTTTACCCGTT...GATTTTCGAGGTGTTCCGCCACCTTACAAGAAGCCTCATGATCTCAAGAAGCTGTGGAAAATTGGTGTTTTGATTGGTGTAATCAGACATATGGCTTCTGACATTAGCAACATACCCAATCTCGTGAGACGGTCTAGAAGTTTGCAGGAGAAAATGACGTCAAGAGAAGGCGCTTTATGGCTCGCTGCTCTTTACCGAGAAAAGGCTATTGTTGAT......CAAATAGCCATGTCTAGAGAAAACAACAAC------ACTTCTAACTTTCTTGTTCCTGCAACCGGTGGAGACCCAGATgttTTGTTTCCTGAATCTACA------GACTATGATGTTGAACTGATTGGTGGCACTCATCGGACCAAT------------------...------------------.........------------------------------------------------------------CAGCAGTATCCTGAATTTGAAAACAACTACAACTGTGTTTACAAGAGAAAGTTTGAAGAAGATTTTGGGATG...CCAATGCATCCAACACTC...CTAACATGTGAGAACAGTCTCTGTCCTTATAGCCAACCACATATGGGATTTCTTGACAGGAACTTAAGAGAGAATCACCAAATG
EIL4_ARATH/5-336 GAAGAATTGGAACCACTTAGTCCAATGGACGATGAAGAAGAAGAGATAAGCTATGATGACCTCAAAAGACGCATGTGGAAAGACCGAAACCTCATGGAAAAAAAGCTCAAGCAACAGAAACGACACAGCAACGACGTCGTTTCGTTTACAACACAC------------....................................CGAGCCGAAGCTTCACGGCGCAAGAAGATGGCTCGTTCTCAAGATTCAGTGTTGAAGTACATGATGAAGATCATGGAGGTGTGTAAAGCTAAAGGTTTTGTATACGGAATTGTACCGGAAAAGGGTAAACCAATAACCGGTTCTTCCGATAGCTTAAGACGTTGGTGGAAAGAAAACGTTCAGTTCGACCAAAACGCTCCAGACGCTATCACAGATTACTTAGCACTCGCGGCTGCTGCTGCTGCAGCAGAGctaatcGATAAGTCCTCATCATCCTCGAGCTTATTACACATGTTACAGGAACTGCAAGACACGACACTAGGGTCGTTACTATCAGCGTTAATGCAACATTGCATGCCGCCACAGCGGCGGTTTCCGTTAGAGAAAGGAATTGCTCCGCCATGGTGGCCGACGGGGACGGAGCTTTGGTGGGGAGAACAAGGAGCGGCACAT...GAG------CACGGTGCACCGCCATATCGAAAGCCGCACGATTTGAGAAAATCTTGGAAAGTTAGTGTTCTCGCGGCTGTGATTAAACACATGTCGCCGAATTTGGGAAGAGTGAGACGTCTGGCGAGACAATCTAAAAGTTTGCAAGATAAAATGATGGCTAAAGAGACTGATACTTGGTCTCGTGTCTTAAACCAAGAAGAAGCTCTTCTCAATatcaaaGACCTCAAGATCTCGGAAGATCAGGAC---------------------------------------------------...------------------------------GATCAAGAATCGTCGGGGTCTAAGAGAAAAAGTGAGTCTATGGAACCGTCT---...------------------.........------------------------------------------------------------------------------------------------------------------------------------...---------AAGAGTGTT...TACACTTGCCAAAACTCGAGTTGTCCTAAAAGTGATGTGAGTTTTGGATTCGGGGACAAGAACTCGAGGACGGGTCATGAGATC
EIL5_ARATH/20-443 GACCTCGAAGAAGACGTGGACGAATTTGAACGTTTTGGTGAAGAAATCAGCTACGACGATCTCAAGAAACGCATGTGGAAAGATCGAAACCTCATGTGTAAGCTTAAACAGCAAAAAAGAGATAATCTTAACTCCGTTATCTCTTCGCCGTCATCT---TCCACGTCAgcatcatcctcttcatcatcctccgttatcgtgcgcCGAACTGAAGCTTCACGGCGCAAGAAAATGGCTCGATCTCAAGATTCGGTGTTGAAGTACATGATGAAGATAATGGAAGTTTGCAAAGCTCAAGGATTCGTTTACGGAATCGTACCGGAAAAAGGTAAACCGGTAACCGGTTCTTCAGACAGTTTAAGACGTTGGTGGAAAGAAAACGTTCAATTCGACCAAACCGCTCCAAACGCTGTTTCTGATTACTTGACATTAGCGGCTGCTCAGTTAATCTCATCA......AACGAATCTTTAGATCCGAATTCGTATATCCACATGCTTCACGAGCTACAAGACACGACGTTAGGGTCATTGTTATCAGCTTTGATGCAACATTGCGTGCCGCCACAACGACGGTTTCCGTTGGAAAAAGGTTTGGCTCCGCCGTGGTGGCCGAACGGGACAGAGTTATGGTGGGGAGAGCAAGGAGCTGCGGCGtttGAA------CACGGTCCACCTCCATATCGCAAACCGCACGATCTAAGAAAAGCTTGGAAAGTGAGCGTTTTAGCGGCTGTGATTAAACACATGTCGCCGAATTTGGAGAGAGTGAGACGGCTCGCGAGACAGTCAAAGTGTTTGCAAGATAAGATGATGGCGAAAGAGACTGATACTTGGTCTCGTGTGTTGAACCAAGAAGAAGCTCGTCTCAAT......CGCCTCAAGATCTCAGATGACGAAGACGAGGATCGAGATCAAGAACAAGCAAGATTCACATGTTTTGATCAAGAACCGtctCTAAACACTTGTTTTATT---GTAGGGCAAGATCAAGAACCGTTGGGATCAATGAGGAAAGACAAAAGGGTTGATCAGGAATTTtccTCGAACGAT---------.........TGTTTCCTTGTAGCGCAAGATCAAGAACCTAGGAAAGGAAAAAAGGCTGATCAAGAATGGTCTCCAAATTCTTGTTTTCTTGTTGATCAAGAACCATTAGGTAACAAGAGAAAAGGTGAGTTCGTGGAAAAAgagGCGATGTTATCTAATGTA...TACACTTGCCAAAACTCGAGTTGTCCTTCGAGTGATGTGAGTTTAGGATTCGTGGACAAGAACTTGAGAACCGGTCACGAGATT