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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF04869 - Uso1_p115_head) |
| Uso1 / p115 like vesicle tethering protein, head region |
| (Pfam reference: accession no. PF04869) |
| (Interpro reference: accession no. IPR006953) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
6 sequences @ 374 aa (ave. pairwise identity: 0.26) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 5.49) |
| nucleotides (available for above) |
5 sequences @ 1122 bp (ave. pairwise identity: 0.39) |
New Hampshire format (total tree length: 3.25) |
|
amino acids, restricted set (corresp. to available nt seqs) |
5 sequences @ 374 aa (ave. pairwise identity: 0.24) |
New Hampshire format (total tree length: 4.78) |