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 pan•dit |
PANDIT Protein and Associated NucleotideDomains with Inferred Trees |
| (View raw data for PF04813 - HNF-1A_C) |
| Hepatocyte nuclear factor 1 (HNF-1), alpha isoform C terminus |
| (Pfam reference: accession no. PF04813) |
| (Interpro reference: accession no. IPR006898) |
| sequences | alignment | phylogeny |
| amino acids (Pfam-A seed alignment) |
4 sequences @ 91 aa (ave. pairwise identity: 0.52) (view Jalview alignment from Pfam) |
New Hampshire format (total tree length: 1.70) |
| nucleotides (available for above) |
3 sequences @ 273 bp (ave. pairwise identity: 0.58) |
New Hampshire format (total tree length: 1.03) |
|
amino acids, restricted set (corresp. to available nt seqs) |
3 sequences @ 91 aa (ave. pairwise identity: 0.53) |
New Hampshire format (total tree length: 1.35) |