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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04811 alignment
(23 sequences with 295 aa)


SFB3_YEAST/294-535 LLPLHYVFLIDVSLLANENGSSLAMVEGVRSCI.EYISDF....QPNCEVAIIVYDNKLRFFNLRPDL-------DNAQEYIVSELDDVF---.---------.......------LPFY-NGLFVKPGNSMKIINDTLIKISGYISTDKYSHVPQVCYGSALQAAKLALDTVTGGQGGKIICSLNSLPTIGN-GNLSLKRDN---AHIA-------HVKCDNGFYKKLASDFLKSYISLDLYVTNAGFIDMATVGHPVEMTSGILKYYPHFQ--.QETDAFTLVNDMVTNVSNI
SEC24_YEAST/301-551 PPPATYCFLIDVSQSSIKSGLLATTINTLLQNL.DSIPNH....DERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADLEEPF---.---------.......------LPRP-NSMVVSLKACRQNIETLLTKIPQ-IFQSN--LITNFALGPALKSAYHLIGGVG----GKIIVVSGTLPNLGI-GKLQRRNES---GVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFYPGFSGK.NPNDIVKFSTEFAKHISMD
YIY8_SCHPO/327-569 PQPLVYVFLIDISFVSISSGMVGTASRAILESL.DRIPNK....EGRAKVAFIGVDSALHFFSVSPGA-------EEATQLVVSDLEEPF---.---------.......------LPRN-QDLLLNLRECRQGIENLLERFQS-MFATT--RDSSNALGPGLKAAHRLIENIG----GKICCLISSLPNVGV-GKLELREDP---KLLGTNRE-SSLLHPNDSFYKSFAVECSTSQVSVDMFLFSSQYQDVATLSCLPRYTSGKTQFYHRWNAS.RSEDALKFASELTNYLSME
SC24B_ARATH/502-745 PMPAVYFFLIDVSMNAIQTGATAAACNAIQQVL.SDLP-E....GPRTFVGIATFDSTIHFYNLKRAL-------QQPLMLIVPDVQDVY---.---------.......------TPLE-TDVVVQLSECRQHLELLLDSIPT-MFQES--KIPESAFGAAVKAAFLAMK--S--KGGKLMVFQSILCSVGV-GALSSREAEGRANMSAGEKEAHKLLQPADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFS--.ALSDPPKLYNDLKWNITRP
SC24A_ARATH/441-681 PMPPIYFFLIDVSISATKSGMLEVVAQTIKSCL.DNLP-G....YPRTQIGFITYDSTLHFYNMKSSL-------SQPQMMVVSDLDDIF---.---------.......------VPLP-DDLLVNLSESRTVVDAFLDSLPL-MFQDN--FNVESAFGPALRAAFMVMN--Q--LGGKLLIFQNSLPSLGA-GRLKLRGDD---PRVYGTDKEYALRVAEDPFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQ--.SSVHGDKLRHELARDLTRE
SC24B_HUMAN/675-917 PQPAVYLFVLDVSHNAVEAGYLTILCQSLLENL.DKLP-G....DSRTRIGFMTFDSTIHFYNLQEGL-------SQPQMLIVSDIDDVF---.---------.......------LPTP-DSLLVNLYESKELIKDLLNALPN-MFTNT--RETHSALGPALQAAFKLMS--P--TGGRVSVFQTQLPSLGA-GLLQSREDP---NQRSSTKVVQHLGPATD-FYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYThNPSQAEKLQKDLKRYLTRK
SC24A_HUMAN/486-727 PQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNL.DLLP-G....NTRTKIGFITFDSTIHFYGLQESL-------SQPQMLIVSDIEDVF---.---------.......------IPMP-ENLLVNLNESKELVQDLLKTLPQ-MFTKT--LETQSALGPALQAAFKLMS--P--TGGRMSVFQTQLPTLGV-GALKPREEP---NHRSSAKDI-HMTPSTD-FYKKLALDCSGQQVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQhNPVQVQKLQKELQRYLTRK
Q9V5D2_DROME/582-822 PQPAMYLFLFDVSIIAQQSGYLEAACAVLNRHL.DEMP-G....DARTQVGFICFDSFVHFYSMAEGL-------NQPHEMTLLDIEDPF---.---------.......------LPRP-DSLLVNLKECKELVRDLLKQLPK-RFAHT--HDPGSALGAALQVAFKLMQ--A--SGGRITVFQSCLPNKGP-GALEPREDP---NNR-SAKDVAHLNPATD-FYKRFALECSGYQIACDLFLMNQQYSDMATISGISKHSGGCVHHFPLYQKT.KPHMVESFRSCFKRYLTRK
Q23368_CAEEL/403-642 PQPAVYVFVIDISAAAIQSGYLHTFAEQLLINI.DQMP-G....DDRSQVCFIAVDQCLHFFSFSSNK-------RYPNEMIVDDIDDAF---.---------.......------LPSV-TSLLVPMKKFKDTIRTFIKQLPE-FYSQIGPTSNGNCLGSALKLAQSMIQ--E--VGGRISIFQVSLPNLGL-GALKSREES---TEGG-----QNLGPATD-FYKALSLECTGSQICLDLFMFNTQYADLATLSEIAKFSTGCVYHFPNYNYRnDIHQVKRFERTLTRYLTRK
YNB3_SCHPO/289-529 PKPARFVFMIDVSYEASSKGLPKVAAEAIRNILyGPVP-L....DPNVKIAIVCFDRSVNFFNLSPNL-------EQPHMLAASDLENPF---.---------.......------VPFS-SGLFVDPIASKVVIERLLDSFPA-IFQDV--KIPEPVVGNALEVVKLLLK--E--TGGKAFVFVSALPTMGL-GKLRHREDQ---RLYGTSDE-KNLWNTQDKWYTSLADEYVTAGIGVDIFFTATAYVDVATVGSVATLSGGQIYHYSNFV--.ADRDGSRLKQDLFRSVTRE
SC24D_HUMAN/437-684 PNPPAFIFMIDVSYSNIKNGLVKLICEELKTML.EKIPKEeqeeTSAIRVGFITYNKVLHFFNVKSNL-------AQPQMMVVTDVGEVF---.---------.......------VPLL-DGFLVNYQESQSVIHNLLDQIPD-MFADS--NENETVFASVIQAGMEALKAAD--CPGKLFIFHSSLPTAEAPGKLKNRDDK---KLVNTDKEKILFQPQTN-VYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQ--.MHLDRQQFLNDLRNDIEKK
SC24C_HUMAN/499-746 PSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLL.DFLPREggaeESAIRVGFVTYNKVLHFYNVKSSL-------AQPQMMVVSDVADMF---.---------.......------VPLL-DGFLVNVNESRAVITSLLDQIPE-MFADT--RETETVFVPVIQAGMEALKAAE--CAGKLFLFHTSLPIAEAPGKLKNRDDR---KLINTDKEKTLFQPQTG-AYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQ--.VENDQERFLSDLRRDVQKV
Q9VQ94_DROME/599-846 PEVPAFIFIIDVSYNTVKSGLVHLLCSQIKNIL.KHLPVDqgqdKSKVRVGFITYNSTVHFYNIKSSL-------AQPQMMVVGDVQEMF---.---------.......------MPLL-DGFLCHPEESAAVIDALMEEIPR-MFADT--KETETILYPAIQAGLEALKASN--AAGKLLVFNSTLPIAEAPGKLKNRDDR---KLLGTDKEKTVLTPQTT-AYNTLGQECVQQGCSVDLFVFNNAYIDLATIGQVSRLTGGEVFKYTYFQ--.ADVDGKRLIQDIIKNVSRP
Q19371_CAEEL/531-776 PKEPAFIFMIDVSYNAISNGMLPILCQNLEKVL.RNLPREsgqlESSMRIGLATFDQAVHFFDISS---------ASPKMLVMSDVQEPF---.---------.......------VPMV-DGLLLPYNEALPGLRAALAEIPK-LFSQS--KTTETILQPVVQAGLDALKCAD--RAGKVILFSTVLPTYDAPGKLKSKNDR---SLLGTDKEKNALVPQED-SYTKLGEQCVKSGVTVDLFLFPNAFIDVATIGQLSAVTGGSIFKFQYFS--.ADKDGVRMLNELERHVSKK
SEC23_YEAST/119-391 TVPPIFFFVVDLTSE---TENLDSLKESIITSL.SLLP--....-PNALIGLITYGNVVQLHDLSSETIDRCNVFRGDREYQLEALTEML---.TGQKPTGPGgaashlpNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFS--.----TAIFKQSYLRLFAKD
O94672_SCHPO/120-393 KSPPVFLFVMDTAVD---ESELTALKDAVIVSL.SLLP--....-PDAIVGLITYGSLIQVHEIGFEAMPKSYVFQPAADYSTMKLQQLLALSgNQIRSSSSKak...isGTGITLNLGAASRFLMPVQKCEMHLLNILEQLQPDCLEVPAGQRQLRCTGAAVKIASDLLGIAFPKCGSRIELFCGGPCTVGLGQVVSTELKEPMRSHSEIANDKAKHFKKSKKFYSSLAERLSNQGHALDLFAGCLDQVGIMEMENLVNNTGGAIVLSDSFT--.----TSIFKQSFQRLFSVD
Q9NFN9_DROME/126-397 TMPPVFIFLVDTCMD---EEELDALKDSLQMSL.SLLP--....-TNALVGLITFGKMIQVHELGAEGCSKSYVFRGTKDLTAKQVQDMLGIGrRAAPGPQQQq.....hLPGQPAGAAAPVRFLQPIGQCDAALGDLLSELQRDPWPVPQGKRYLRSTGAALSIAVGLLECTYPNTGGRIMTFVGGPCSQGPGQVVDDELKHPIRSHHDIHKDNVRFMKKAIKHYDALALRAATNGHSVDIYSCALDQTGLLEMKQLCNSTGGHMVMGDSFN--.----SSLFKQTFQRVFARD
SC23B_HUMAN/126-395 QSPLIFLYVVDTCLE---EDDLQALKESLQMSL.SLLP--....-PDALVGLITFGRMVQVHELSCEGISKSYVFRGTKDLTAKQIQDMLGLTkPAMPMQQAR.......PAQPQEHPFASSRFLQPVHKIDMNLTDLLGELQRDPWPVTQGKRPLRSTGVALSIAVGLLEGTFPNTGARIMLFTGGPPTQGPGMVVGDELKIPIRSWHDIEKDNARFMKKATKHYEMLANRTAANGHCIDIYACALDQTGLLEMKCCANLTGGYMVMGDSFN--.----TSLFKQTFQRIFTKD
SC23A_MOUSE/126-393 QMPLIFLYVVDTCIE---DEDLQALKESMQMSL.SLLP--....-PTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEML--GlSKVPVTQAT......rGPQVQQPPPS-NRFLQPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFN--.----TSLFKQTFQRVFTKD
Q9C284_NEUCR/127-397 PAPPIFLYVVDTCQE---EDSLAALKESLIMSL.SLLP--....-EHALVGLITYGTMAQVHEIGYTECPKSYVFRGNKEYAAKQVQEMLGLVqPAMRPGMPM......qQPGRPFPAGPASRFLLPVSQAEFQLTKAIEQLQKDPWPVAGNLRALRCTGVALSVAVGLLETSFQNAGGRIMLFAGGPATEGPGMVVGPELREPIRSHHDIDRDNIKYYKKALKFYDNLAKRTAHNGHTIDIFAGCLDQVGLLEMKGLCNSTGGHMILTDSFT--.----SSMFKQSFVRIFEKD
O74873_SCHPO/120-389 QLTPVFLFVVDVCQD---EENLQALKDSLIISL.SLLP--....-PECLVGLVTFGTMVDVYELGYTECSKSYVFRGSKDYTSKQIQEMLGLPtSNVSPVALQ.......QARSFQGSAAPSRFLLPIQQCEFQLTNILEQLQPDSWPVANDRRPQRCTGTALNISVSMMESVCPNSGGHIMLFAGGPSTVGPGTVVSTELREPIRSHHDIERDQAKHVKKALRFYEGLTKRVSANGHAVDILAGCLDQIGIMEMKSLASSTGGYLVLSDSFT--.----TSIFKQSFQRIFGRD
Q9SIJ7_ARATH/124-394 PSPPVFLFVVDTCLI---SEELDFLKSSLFQAL.DLLP--....-DTSILGLITFDSLVRVYELGFPHCTKSYFFHGNKDCTKDQLLDQLSFFvKNPKPSSGVi.....aGARDGLSSDDIARFLLPASDCHFTLHSVLEELGNSPWPVAADHRPARCTGVALRIAASLLGACFPGSAARIMAFIGGPSTQGPGAIVSRELSDPIRSHKDIDKDSAMYYHKAVEFYEMLAKQLVHQGHVLDVFASSVDQVGIAELKVAVEQTGGFVVLAESFG--.----HSVFRDSLKRVC-QS
O23275_ARATH/128-399 PPPPVFVFVLDTCMI---EEELGYAKSALKQAI.GLLP--....-ENALVGFVSFGTQAHVHELGFSEMSKVFVFKGNKEVTKDQILDQLGLGsSSRRAPTSGf....skGAQNGFQSSGVDRFLLPASECEYTLDLLLDELQSDQWPVQPGHRPQRCTGVALSVAAGLLGACLPGTGARIVALVGGPCTEGPGTIISKDLSDPVRSHKDLDKDAAPYYKKAVKFYDSIAKQLVAQGHVLDLFASALDQVGVAEMKVAVESTGGLVVLSESFG--.----HSVFKDSFKRMF-ED