EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF04757 - Pex2_Pex12)
Pex2 / Pex12 amino terminal region
(Pfam reference: accession no. PF04757)
(Interpro reference: accession no. IPR006845)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
19 sequences @ 319 aa
(ave. pairwise identity: 0.17)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 20.96)
nucleotides
(available for above)
19 sequences @ 957 bp
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 13.65)
amino acids, restricted set
(corresp. to available nt seqs)
19 sequences @ 319 aa
(ave. pairwise identity: 0.17)
New Hampshire format
(total tree length: 20.96)