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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04738 alignment
(9 sequences with 918 aa)


SPAB_BACSU/167-1022 GKSEEVSVRATSVFYLINELC-GESAAYQDIIRCLIDNYPNTPINKINQYVADLIDKEFLISNLRPPMTVSDQFQYLIDQAESRHI--PNELIQACKDIQYQIDAYNRITIGEG----EHQYLNLIETMNKL--IK---ASSPLQVDAGLADSS--IQLDNETSLAISELASMFTYMASPSA---NTLDHLEKYHNVFLERYGYEREVPLLEMLCSSTGIGAPATYTNPANEFFEETSFGEQFSPEMKQFFMRKYFESVRKKAPIQLDDETFHRICNSEI---.--ADEEIPLSFELNFFVKLRNGRVKLYL--GPNVGSTRAGKTFGRFSHMSDSISEIIKTLHNKEKELTEC-------NTKVCELSIVPNQTRSGNVTRNVSYREKEMSLFTNSALHLNDSVKAEDILIGINKDHNFYARHKTTGEILSFESNHMFNPLLMTN-AVRFLLEISRDGK--RKWNDFPWFSIYSDFKYIPEIKYKEITLSCEQWLIYKNDLSMHSNASLEEIKSPFFEFHRTYELPQTFYIVNADNRLLIDIENDCTLDVFFWELKKTNHNQP-LQLVAVEHDADALMDRNQNDYSGEIVVPLLRKQPEKPLYLP-------------VLNAIEGSGSDRIKMP-FEDWLFIKLYCKQTREEELIAFEIADFYNQISD-QYPVRHFFMRYRDP-KPHIRLRFNGKA-EVLYSLFPQLL-NWLKSLREKGLVSESVITQYEREIERYGGLSLMEAAEQLFCEDSKVVEMMIRMHRMKDITISKEIAGMVSVIQFLEQF---ELTFEEQLTFLERNSLQNEYRTEFKKDRE---MYIEICNSDRDWDNLKKTSDG--GMLYETLKTRKMAAAHYAFLIKKAFDNKDEVYSRIGSIIHLHCNRLFGTDRELENKILTLCRHSLYAQRYQK
Q9FDU8_STRPY/153-986 ESEEDRNISFSKPIKLLVEKCKTRYIKYEELIDVFKNNYPDIVSDMLESYIHDLVTNDFLISDLRPPICNINSLDYLLSKLEE------GTLCTDLTTLKKMIEDYNDLNIGEG----RDLLLQIFDKMESI--YKYDNGGNYLKVDSLAEYEGDFNILSETARESIERLAEMFVKLNTNVKRRGGRKNSLEEYQLKFIGKYGENCSIPFVEVINKDAGIGFPEYYKGGEGEAIEL-------SDPIMQMFEKKYEEALLNGGHIEFYSKDLDDFQTDQSNSL.----DSFELNFNI----KIINNDVKLYL--GANIGSGQAGRSFGRFYGLSETVRETIKNLNHQ--------------NNTNVELSFVPKQIRLANVIQNYSDESYNTSFFTTSWD-SENELRLEDIYIRYSD-GKFHFTTIDGKNELKFTMNNMLNSDSQSR-VLRLLVDLSEFEYGLSHWSLFPWDILAQERVYIPEILFEDITIATAQWNLSVIREEIIHQKIFTGKKDIFNKFRKTYKIPKDIILKYADNELRLDLSIDSDLEILFKNINKYRF----VSLRGIE-QGESIFKDNLGNYNTEIVVPILKESNGINNT---------------NDNVQFKNEVKKIYLP-FCDWLFFKFYGPKERQEELLNNWKKFWLNLPSELFSQSNMFYMRYNDT-NDHIRIRINCDSIENNFSLYLSVVQDLLPQLIESCIISDIEVSSYKPEVNRYGGPHLISYAEEIFCKESILFLNNTIEFSDDERLVCATYL----VLYYLNHFF---KDKETRRSFLFENYTGKYKKDFKNLPIDLPIEYMKILNGVTSALDRYDFFQE--------MDRYLMSYMKEYNRFGGTNDIYNTKFNLVGSFLHLSMNRLNGIDREFEEKVYCFAYYTLNAQQYIE
NISB_LACLA/164-993 SELEEVNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGDEYRELSEQYLGSLIVNHYLISNLQKDLLSDFSWNTFLTKVEAIDE--DKKYIIPLKKVQKFIQEYSEIEIGEG----IEKLKEIYQEMSQI--LE---NDNYIQIDLISD-SE--INFDVKQKQQLEHLAEFLGNTTKSVRR-----TYLDDYKDKFIEKYGVDQEVQITELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVKNHNVINLDDLE-SHYQKMDLEKK.-----SELQGLELFLNLAKEYEKDIFIL--GDIVGNNNLGGASGRFSALSPELTSYHRTIVDSVERENENK------EITSCEIVFLPENIRHANVMHTSIMRRKVLPFFTST---SHNEVLLTNIYIGIDEKEKFYARDISTQEVLKFYITSMYNKTLFSN-ELRFLYEISLDDK--FGNLPWE--LIYRDFDYIPRLVFDEIVISPAKWKIWGRDVNS---------KMTIRELIQSKEIPKEFYIVNGDNKVYLSQKNPLDMEILESAIKKSSKRKDFIELQEYF-EDENIINKGEKGRVADVVVPFIRTRALGNE------------GRAFIREK-RVSVERREKLP-FNEWLYLKLYISINRQNEFLLSYLPDIQKIVA--NLGGNLFFLRYTDP-KPHIRLRIKCSD---LFLAYGSILE-ILKRSRKNRIMSTFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKVDDVSILVNYLYLKCFF---QNDNKKILNFLNLVSTKKVKENVNEKIEHYL---KLLKVNNLGDQIFYDK---------NFKELKHAIKNLFLKMIAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVSEEYMK
Q9F0G4_STRMU/171-980 DIREDITVKSNQLIDYVINCT-EEPISYQTLIDDIAEKFSQ-SSDDVKEYLQKLIKEEFLITELKFSLIEDNPLDWFINILERDQN--NSELLEKLTEIKAMIQDYTDRNIGEG----NNSILALENKMSQI--VK---ANAYLRVDLYD-HAE--LKLAQHTKSSLQNILKVLSSFSSAVN----SQKEIKNYHEKFIARYGYERLVPLQLLLNSTSGLGFPKGYSQTEVSK--QNNE-DSKNQKIIEFLQRKFEKALRDGKEIILSDDDLKDLNFDTEQQ-.--ISGELYCFYNF--------KSKKLEV--SSLGVSQILGNTFGRFHSKLPNTIVTKNVNKTKEIFTEAYP------NTIITQLNEVPYFGRGGNIMISNSLKSHQLELRNYT---TKKEMSINDIYVGATSE-ELYFYSKKYEKRVIFVMNNMFNYINGSK-LLRFLLEVSNSDF--QNITPITLG-SLDSYNHVPAIIYKDIIIKPETWDIRKSEAKT---------LDSLKNWLTNNNVPPFVRMKYTDQIIYLDLSRTIDLTMLFQSIKKHSF----IQLLDVH--SV----CTNDTEILELVVPFTRSDVNAHQIYH-------------YAQNIYT----LEDSGSKEKYFYAKIYVNKQRQTSFLQKEYPLLLNYLKL-PENLQWFYIRYKDDGKDSIRLRIRYVEDKQLVQLYSRFIE-WATKARKNIQISGYEISEYIPESARYGGKKYSSIIHSFFYYDSIL--DLLLQKKAEQTIEVRTSLSIIRMFLMMKLSL---QDQQKLIKNLFDGKHKLKYEKEYHNSISLLL----------DNLCTKNQTDEADIFCVMNMKKITEK---ISSVLKQKD-LTTDWQRILGSLIHMRCNRVYGINSELERKTMFIVDKVINSKRYTD
EPIB_STAEP/171-983 KRNDVLSVKYNSILVFIHENS-KKNITYEELVQLISSKYSIENKEEVKVFVQELINKEIIFSDLRPTLENKNPLDYIINSLNPK-----NSLVGTLINISNEITKYSKMPLGKG----EYKYLDIVNLMSQL--FV---SKNYLQIDTYIDYSR--NELKQSLADNISEAAYILWLLSPNHF----GTKTIRNYHEFFMDKYGFEQLVNLKQLLSDINGFGYPKKDSYSFSNN--------------IAFLKEKYLLAIQNNSHIEITENDVKNLEKNNTVSK.INAPVSTEIYSEIYFGNSIKGYEDFAVI--SPILGSFNAGATFGRFTGNFNIKKKN----QLQKEIVHHYNNYMNENGLEISQLNEGPLNSRNVNILNNNRIYNTCLNLN-----LPKSDIDINDIFIGATFN-KLYLYSEKHDSRIVFVSNSMFNYEFGSE-LYKFLREISFEKT--KFIQPITEE-GIDSLPFCPRIIYKNIILKPATWKINSEMFSE-----TENWLNRFATIREKWHIPKDVIIAFGDNRLLLNLLNDKHLIILKKELKKHG----RIRILESFI------NESNNERMLEIVTPLYKKTSLKEQSFI-------------------IPKNRNKHFNNLKDWFSIHLSIPKTYQDNFIQDYLLPFITELKVNNFINKFFYIKFKED-EDFIKLRLLRE-DEDYSQIYSFIK-NWKDYCLLNSELYDYSIVDYVPEVYRYGGPHVIEDIENFFMYDSLLSINIIQS-----EFKIPKEFIVAISIDFLLDYL--EINKSEKEEILINNAEDLYRSNDIREYKN---LLAKLTNPKNDYEILKKEFPNLHEFLFNKI------SILENLKKTLQKSLYTSRSRIIGSFIHMRCNRIFGINPEKEKFVLSIFNEITKTKKYWD
Q54123_STAEP/171-964 TVPNNISVKKNELSKFI--FTKLNNMLYKDLVKLVEDEFDA-DTIMVETYLDKLIEENFIVTELEDAISHKDRDIFLIKKLEQKGF-SNSYYYKALKEIYDIRQIMEKGNIHDDILYRIIEVKKFLKEKFNL------DVHNIFKVDTIDTNIE--IDLSKSEINNIKKVIDMLLYLPSDYD------NSLQEYKNKFLEIYGQDEYVNILKLLNKNTGIQYPINIYNNKAFQ--YN------NEKVYSLLTEWQYKAIRDKTDIILNEERIELLKRVGKKP-.--IDKSFDMVFTV---TKDGFNNNIYHL--NDNVTSLKATNIYGRFRYLNTKYFEEQLNKF-----------------PDSVGVPSDNLNYHHPNPIIDNVKFKSIF---------FDKQTSFTDIFVFLGEDLNFYLKNLKNGETFIPKISDMHNTQYSPN-LIDFLSKVENQFI--QEY--WNIENYLSDYTFLPRIVYKNIIISPRKWKINFLEKIE----NYSQFIKIFLAKKDELLIPNRFYIQQADLKIYIDLENERCMEILFKESKKNIS----IIIVE--IEK----NLLQNKKVKEAVFSIKSDLHQEINY-------------NYMMKKDHIPNLSKEILYIDDGWISVNLYYNDNNINKFIGEFFLTNIFESE--NFSDIKYFIRYADE-KEHIRLRMKLEFDQ-----VKSAL-HLFKEMVDLNYIIDYKIVPYYRETYRYGGKEVIEIVEACFEKDSEIVSKFYAYSNISSKEKL--YFNILNIFDILSYFS---ESINDKITFFKDINHKVQNKKIYRKYKD---NLLKTLNGSYEENY--------------NSYLSIRRKEYQKLKEALKYEEVNYKKSIILSIVHMFNNRLSGINREHEELVMEFASRTLIDYQNMR
O54222_STAEP/174-969 NANNNINIERNELSDFI--FSNLDSILYVDLVDLIKTKFNV-DSKTVENYLDKLIQENFIISELEEVINHKNKDIYLINFLEKKGVSPTNKYYQMLKSVYQFRVSLKNNYNNKS----LNQLMKINETFKKT--LG-FDSSNIFKVDFVNKYSE--INFKEKDIQNIKKVINMLLHLPENYA------DYLTNYKSEFSEIYGQDEYKNILELLNKNLGIEYTIDNKDNE--KFKENIQKSKKN--IYSLFSEWEYKAISENQDIVLTDEKIQSIKSLGEPP-.--VDASVDMIFTV---TQNENSEYIYHL--NDELTSAKVTDMYGRFRYLMNEDFEKALNKF-----------------PHDIGIQKVNSNYKHPNPLIQNVKNSDYLSSYSS---------DFKNYFVFLGNDLNFYLKNKKDETIFIPKISDMHNTDYSPY-IIDFLSKIEKQFI--KEYWSIE--NYKSSFVFSPRIVYKNIVISPKKWKLTNFDKMD----NYENFKKLFFEKKVELSIPDQFYIINADLKIYIDTQNTWCLELLFKEFKKNEH----LNIIEVES------NLLNNKKIKEVVFSAKSDICQSINIYE--------------ENKNNINLPKEILYI-TDGWLSVNLYYNENNISKLIGDFFYRKLFENEIF-KNSIKYFIRYIDD-KKHIRLRIKINIDE-----INKVA-KILKEMVDINYIKSYKIVPYYRETARYGGKEIIDIVEECFEKDSKIVSKYYADKNFSSDDAL--YFNITNIVDILSYLT---NSIDAQIDILSDISHKKENKKIYRKYKN---NLMKIVEGDVNKY---------------NIYLNLRKYAYSKLKFVLSDKKINDKKDIILSIVHMFNNRFIGTDRKYEEFVMELLSRTLIDYKNKK
Q9RK93_STRCO/176-1041 TGAQEQSVRDNALVGAVRERA-RNPVPYADLLVSLAERFPALDAERLDGQLAGLLQHGFLLTSITPHRIDVALLDGIEAVLDGAL----PDDARALRDVRAACARHQQDPPGMGGDSWQDALDAVRRLDVP-GTGDDAHARPPLHVDLHVPGE---FVVPEAVGREVCRYAAAIWAITPQW----TTLAYMRDYRERFIERYGTACAVPLGELVDPHRGLGLPSEYGAEPV--YARGGPGDEADGPRRAMIGELLQEAVLSGGDLVLTDEVVGRLGEVAGHDPaAAPPRSLELCFQVLSESTAALDRGEFRLLGSPHIGAWTAGATAGRFAAAAGLTDELARLAAESTDDT-----------VITAQVELMPHEPRGLNIVQVPRLLPYRIPVGVPDDRRDPRCLDWRSLLVAAGSD-GLRLLDPRSGRPVRPVLPHMLALDTQAPPVARFLMDLATARP--RVWSGWNWA-GHDALPYLPRVRYGRVVAVPGRWLPGRRLRDAARAQGAGAWEQGLDAWRRRLSVPDRLQIARNDQMYPVDLRERWDRDLLRAELTAAQPR----FVLYEDLTADGAGLGWNGGHSTEIVVPLAAARRAAGRTAPGRAEPARGRTIPPVRPVPVRPAPVRIHLP-GEDWLFVKWYAEPSAHDALLTEHLPALLSEVE--DEVDRWFFLRYQDP-EPHLRLRFHGEPGA-LNGRVLPAISRVTRVLVESGALRTMALDTYRPESDRYGGEAVQEAAERFFRTDSLSALVQLRALRGPARALPGAVLAGLGHAVLLESLG--DWDWCGWVDRMFTKTVEHEVYQRHRAVADRLIGPGRAVSSAAAALGAPSLG-----------ALWSESPEPRAYGELILSAPEADRDEALLSLLHMRHNRLFGIDRAAEARGYAVLRGAVRTHAGRR
Q9KYL1_STRCO/188-1026 SPAAEVSVRYTSAVRIAVDAA-ASPVPVHAVVALMRSEFPDVPADRVEGLVSSLVERGVLISSLHAPSATLDALDHLVEQAEAAAAPSATGLVADLRTVRDAIARHNQVLAPAD---GRRLRTALRRKMTAL--SS--VKAQPFTLDLRMDCS---LTLPPQVAREAEQAATVLARLSAYPF----GTPAWKDFHNRFFERYGINSLVPVRDLVDPDVGLGFPVGYRDAQPEQGEALTARE-------QRLLSLAQAAVLDGRDEIHLDEDLIRTLTVGDRNA.PHVPAHTELRFRIRATSQEALESGDFVL--HGIAPSRGIGTTIGRSLGLLAPDEQARVAVMLEELPVNTP-------GAVPTQVSFTPLDRGDTNVTRVTELLPAVISLAEHR-PVDARTIPLDDLAVGCDRR-RLYLVSLSRACLLDPMTLHALDLRGHTPPLGRFLTEISRAQT--AVLTVFPWA-SATALPYLPRVRYGRAILSPARWRLDRSELPD-RRASWGEWHKAADEWRARRRVPDEVAVAEGDQLLPLDLSERAHLALLRAHLDTHES----VILTEAESEEGWF-----DGRSHEIIAPMTAVRPPQWPAVP-------------PVTADQLVTRDHGYLPGAASWLLVKLYGHVDRQPEILADHLPALLGQWD---EPPTWWYMRYRDP-RWHLRLRIAVPSEQDFALTARRVS-SWANGLRRAGLLADMQFATSYPETGRWGPGPLMNLAEDVFAADSRALAVQFAQSSRPHQ-------QVLAAANFVSVAAAFTGSTAAGMNWLIAHGRITDPRPMDRTVRGQALRLADPADGWAALRAAPGGDA-------IASAWSERDAALARYRQKLDAFGGIDLDLVLDSLLHAHHIRAAGIDKDDERMCVRLAHAAAMAWTHRG