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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF04735 alignment
(7 sequences with 1331 aa)


Q9YMN0_NPVLD/10-1218 QIFENIFQCTDRRDECVLEDLDSADSIILRNDVNQNKRVVRTYENFQKLLYALTDARTA--------------------------KSAAWGGAPAACFEGHDRCV-EPHDWCVQDNCFVLMVRPFIERRHYERIKNEVDFTQFLRSNRRGLGNECAFAGDYVYWPN----ISITYFGWRLFVKMKLELELSDCVPLIHHRRLGNVNLFDVQPDFFLNIEMSLTCGAR---KLFVNGRTPFTD-------AHDELFEV--KQADGSTGRCRINDR---LVYSNKNFFNYLRDDINLVECVTAPRYQSLIRVNLKSLRQFGEA-HSE-----CKLDNFEALKITKNITPSSESLDEIKAHVKSCLAAIENCMVSALSKLDIANG-PVLRDYFCKSEFINFDYLVVLVWRLLVKNQEF--DFAEADIRLYLELLCEALFSTPAGPAKVGAEQKTEKAHEAALKRCEPYCNLTPKIFMRFCNHWTLFMEEDALESIGCYFAIHYALYYNNTKRNPTASERDKWNYTFESAVTCGLAPEVLARGFLKKIISA--NACLVFNGKHYTVV--KKDDDLFKLTEKQTAISMSSVKFNSWKYLYFTEEGVYNLVINDYHSPTPFILGNTLLNSLTKKNEKTHLPESALNYMLDMGRHERDIYQIYHVAKICRDIRASKTNVSILTSVDNC-ERCKGAEQQRLNELFREVWHYDDKELVIMGLFLNEKKMSDLIANSRCLDCQESHS----QDCDCIRNMRVDARAFRLALMSELFFSSRALRELVWSLIY-TSRLYSDALAPSALEQGYFMCESVAKHAAFVYQHRLAIIDYLHRLFDNVDFVEQLTMRMLTPDAFVASFESHMECADRMDEP------------------------------VDEEGEEDDDGLMRAFYRDYTTVLSFLTKW-NIWWDRLVVARH-DDDLNSWLVRFYMRIIMSR--IDLRDYSHVFVRKVVTGYLYFRNFTNHNYTNSLVMMHFDASLAIPGDYEKLANYIIGEANAGKSSNNELMENIFVVHKHDADSYT-LSKKETDEMEANKLISQLYVINEMKECSDSFFKNSADSTKSNAVCRKYQSSQKYEANYKLQIVNNKPLFIVG-YDKAVRNRFAIVYIDHVYEENLP-FSGSVYSHIKNKRYPLEKGYYEGLVTPVRLFLAHILMYRRNPKDGYVPYRALVKNDPIHNYNLTCLDIHNSPVSALIYVLRAQFV--LGKP-----AVDENKVEKMIELAAPHLETMIHEAFKTKRYS-----------GQTRLNQLCADFKKRFR--KCYKSDQKIFVNLSMAWNKEDLNLVVPAFKS
O55441_9NUCL/10-1222 DVIFKDIYEAV-DKNDCVDTLNDSENVILVNDVLKCARVIKTYENFVKILTLMTNTQTK------------------------------SNERVACAASHESVAV-QPHDWYVRQNIFQMFVCPFVDVENYERVKDRICFDKFIASNVSGYANKCVRAGDYYYWPN----MAVIYCGWSIYLKKQFDIDMGCTIPLIHNRRLGNVNLFLNNPEDFLNIELSLTNGDK---TLFVNGRSEFSE------EKDDDLFIL--TMADDTVCKCKIKPE---LVYSNKNFFDYLKDDINLKKCVTSDDYKSLLDIDLNSLRVFNEKVMDS---AVVETNE--RLKVFRNITPSSENIKIMQHHIAECVALVKERMIDVMAHTDYADS-NVLQNYFIKSNFVNFDYIIIVLWRTISKNEEL--NFTKTDIKLYFELLCETIFGDKS------------VAFDTAKRRCEPYCKLTPKVFLRLCNHWSIFTNENPCVTLAFYYAIHFLIYCK----------HGNWEYTLENAKTCGTIPDVLCAGFFKKIVSS-GNMTFVFNGKHYVLV--RKDDDLYKLTENCAAITMPSIKFNNWKYMYFTEEGVYNLFINDYHNGCPFIMGNTLLKSLTRKNENTYLPERVIQYMLDNGKNEVEIYKIYHMAKVCREIKSVKNNMTAIIAFNNC-PHCKFQEQKTLNDLFREIWNYGHNELIIIGVYLNDKKMSDLIMNLKCHECKESQYMRRNKKCSCLDKLEINVKAFKVVLAMELFSNCKEMLELIWSLLY-TSSVYSRILMDCVSAEN----SLIHEYADFFTSNRTKIIECLYDYLDKIDFVDLFVVDLSCPNAFLNKLKRNILNDIDEDED--DEIRKIEKFLTGGEDFNDNTIDDDNVKIQTRNGNPDDEPFIQNFYYNYYTTLTMLKKW-NVWWDKLIVKRH-NDDLNTWLTRFYMRIFMTK--LNLEDYSSLFVKQIVMGYLYFRQFTNFNYINSLVTMHFGAGTGIPTDYEKCCLYLNGKPGSGKSSFFAVFDHFIVVHKHDTANYT-LTKKDTNEMEADKMISQLYVINEMKVCDDSFFKSTADSTKSNSVCRKYEGSQKYEGNFKLMIVNNKPLHISD-YDKGVRNRFAVIYTDHLFEENLS-FTGSIYWHIKNKVFPMEKGYVDELAKPVRLFLSHILMYKRNASDGYVSYKKFLEKDPIHNHNLMCLDVNNSPLNALLYVLKVNVK--PGVK-----MVDESKIEKMIELAVPYVETMLHDKLVTKKT-----------NVPQRTAMLFDAFKRKFK--KYYSDERKMFYSIDMAWKTADFNTNQPEFIC
Q99GW4_9NUCL/10-1253 AIFKNIFNRIQQPDNETVVNLGCVDTIVLKNSATQEKFLIKSYQILEKLIVAVSTKQTRCNYKSCNNNSAIANNNLVHVNEIFGVVDADSGGAAASSSKDHVKSI-DSHDWCVQGNYFAIKIRPFILQRYYEAVRDSISFSEFVMSNAEEYANKTESAGDYVYWPN----IEISYFGWRLYLKLKFDIDIGEYVPLPHNRSLGNVNLFVWYPEHFLNVELCMTCNRN---TLFVNGHSIFND-------SNDTLFTI--RMSDGSKGVCKILPK---LVYSSKDLFEYIRDDIHLQECVTAPKFSDIVQIDLRSMRVFDDKTFSN--YETVK-VQKFSPTIIKNITSSSENYELIKNEIDISLDKIKTSMIEGLQNQEGVDD-DVLIRYLSESNYFNFDYLIIVVWKMVSR-QRF--EFCETDIKLYLELLCLALYKNDA------------ESLVKVRARCDPYVQLSTRVYKKFCDSLHFFSMENPCVLLGYYYAIHYCIYLNSL--NDDMSFNERWAYTYERVMTCKLPPNVLCLGFLKKLESQ--GSFYVFNGKHYVPV--KKDDELFKVTETGPSVKLSTIKFNNWKYLCFAEQGVFNVFINHYHNSCPFIIGNCLVNPFRYIDENEFLPKETIDYMLNNAKYEMEIFKTYHVAKVCRDIKVIKTNMSIINSFDNC-RQCKNAEHSKLNQYFHEIWNSSPNELIIYGIYLNDTKMSDLIKNLRCVECKEAGTTQ--TSCSCVAQMNVNIKAFKLTLIFELFCDNAQLVELIWCLHY-APETYTKILG--AQTND----VIIEKYAPIVYERRLQLIDQLYNKLDTID-IDMLLYEFSSANILLKILTMEDSTVAAIDSNVVVTAADNYDYDDFAKTPKNNC---NDDGNSDYISGNGNEQYFDHFYKNYANTIVILRKY-SVWWDKLIVARP-SDDLAKWLTRFYMRVIMSR--IDVKTYSPLFVKQVVRGYLYFRLFTNFNVKNSLLMMHFGASLGIPTDYEKCCIYLNGEPGSGKSSFFDLLESIIVVHKRDADKYT-LSKKETDEMEANKLISQLYVINELKECNDSFFKSTADSSKSNSVCRKYQGSQKYEANYKLLVVNNKPLHISD-YDRGVRNRFCVVYTDHEFLESMQ-FNGSIYFHAKNKKYPQEKAYFEDLTKPVRLFLSHILMYKRNPRDGYVYYKEILKSDSIHEHNLKCLDLNNSPLEAIVYILKVKSR--PGAK-----PIDETKVDKAIELAVPFLDKFLHALLRKRNYQ-K-----------FYETTLCAEFRKAFE--KHYRPYDKVFVNLDMSFNKNDFNLNVPSFKC
V143_NPVOP/3-1223 SILSRLFRDVTGDEEYAVNSLRDANRLIIIDTDTGTRRLLEHVSNFRRFLNTIRSDAAG---------------------ACARHQRAARHDDEEEAPPAARVSF-AGHSLVLENNDFCVFVKPFLLKRHYDEIKNYLKLDRFFKSDNPEHTNMCVQAGDYCYWPNWPASQAVSFTGWQLYLYVEFGIVVESTVPIIHNRRLGPVDLFVFNPRTFLNIEMNLSTNEAPPVKLFVNGKFDFEKKVAESGKAVESLFEI--KMANGATATCKMIAN---LVNSNKNLFEVIRDNINLEECVTTPKYRHIIDVNLTKLRQFAHDGA--VLAPPVE-RAFRAPTVTTILSASSENAEVIQSEIDAALVKVREGMVKVMAEFNRSDDPDLLQAYFKESGFKNFHFLLFNVWKQITKRDKK--SFRETDMKLFFELVCETLFGNDS------------DALATALVKCEPFTTRGVATFNSLCDHWHCFKGVNPYTLLGSYYGAHYFIYLKLTS-SDAHECDDPWAFNYKNAMECKVPPKALGEAFFIKVENVVTQVTLVFNGEHYQIV--KKDDELYKLVET-NPYKLQNIKFNNWKYMYHTKYGVYNVVTDDFYSNCPFLLGTTMPGTFKRPDDPPYLPEAVFAHMLATSAEERDILRTYHIAKLCRDVKMVKVNLGTVNLLGDC-APCKLDARLRLNDLFRELWNLDDDSLVTLALYVNKLRVEDIVHNFKCGACRASV---QERKCRCVQKIKINRQALKTCLIFDLFVGDPELTQLMWMLIFATNKLYINTAL--IVTTS----KLVAQHAHFFTKEHIKIAAILHRDLHKIEFVDTLMADVCNHDAFLAYLQHAVANEPAAAPA--------------------------------------ADNAVAKFYAHYANAANILHKYKNLWWDKIILARD-SDTLSSWLTRFYLRVILSK--MDVQNYPVAYLTQVVEGYLYFKRYTNFNHASSYMLMHFAASLSVPTDYGRKAVYLPGVPLSGKSTFFELLDFLVLMHKFDDDTHT-GASKETSDKEVSNLNSEVYTINELKKCSESFFKKHADSSKSDSKSRKYQGLLKYEANYKMLIVNNNPLYVDD-YDDGVQNRFLIVYTDHKFLPHVR-FSGSVYHHILTKQYPQEPMVVDALKDSVRVFLAHVVRYQREPQTGLVPYKTLLDSDPVHQHNLTRLSVNNSPMYAVIYILNIKTAPRSANT-----FVTEEKMQEMIGYATLHLKSFLHPSFTQYNAA-KNINAGTARSFVFDEKILLQQIKDKFK--NNYDERGCKFNNLTMALNKLDININVPQFKC
V143_NPVAC/4-1221 NILQFFLKNVPQDKTYEINNLQDANHLIIRNTRTGTRRLFEYVNNFQQFLNTIRNNFNG--------------------PCAKHDMGASCEDTEEPAEKHAAQTL-DGHDWVLESNDFCIFVKPFILKKHYDIIQKYINFEDFFKSTDPGYINKCVQAGDYYYWPNWPKKQAFSFNGWQLFLNIKFGIVIEPTIPIIHNKKLGPVDLFVFDPKCFLNVELSLRTNHDPPQTLFVNGKTKFDD-------SHEDLFIL--KMADGTVATCKVNGE---LVNSDKNFFNYIRDDINLEECITVPKYKHIVNVNLKSLRVFENNNFDKNDVDLSD-TRSRKPRIVPIISASSENADYIQTQINLGLIAIHENMVKVLATHERANDPNLLQQYFEKSKFKNFDFLIYVLWKILTKNENF--SYRETDIKLFLELLCESLFACDK------------EALNEALKRCEPYKKQEKIVFNRACNHWFDFDDTKLCVSLGYYFGIHYMIYLTQSAKNEILDHDELWAYTYENVMALNLPPDIVCKGFFRKLENVVTGVNLVFNGKHYQIV--KKEDDLFKLTKS-NCYKLSNIKFNNWKYLYLTTHGVYNVFTNSFHSSCPFLLGTTLPQTFKKPTDEKYLPEDAFNYMLSTSADELSIYRTYHIAKMCRDVKMLKTNTAIVNYMGNC-NTCQADMRVALNNLFRDLWNLDDENLITLALYVNKNRVSDMLHNLKCKPCRSTVS-GSRPKCKCYKKIKINRKALKVCLMADMFGNDAELSELIWMLIF-TNKTYVSTTL--IRTNS----EFVNQHGEFFSKEHNKIIQYLYRTIHKIEYVDMLMDKFNDKRLFLTELRDDVAREPDVQFE--------------------------------------ESDNISKFYTHHADALMILKKY-NVWWDKIILARS-TDDLPTWLTRFYMRIIMSK--VDLKEYSYNYLKKIVEGYLYFKRFTNFNHANAIMLMHFAASLAIPVDYGKKAIYMPGEPGSGKSSFFELLDYLVLMHKFDDDNHSGESNKETSDKEVSKLNSQLYTINELKQCSESYFKKHADSSKSDSKSRKYQGLLKYEANYKMLIVNNKPLYVDD-YDDGVQDRFLIVYTNHKFVDSVK-FAGSVYEHIKSKQFPIESMYYESLVTPVRLFLSHVLMYRRDPKTGFVVYKTLLSNDPMHKHNLMCLSTNNSPLYALIYILNIKTV-RSATI-----TIGEDKMEEMIGIAVQHFKNFLHPSFVQYNYK-KNINASSSKSFVFNEQVLLQQIKNKFK--NNYNKTTNVFYNMTMALNRNDLNTSVPNFVC
O71114_GVTN/3-1151 TDLGAILNTYQTHERITPKDCASNEYWLFRDDSTNVYK------------------------------------------------KRWGADAEFYVQLFNSVTF-EEHTWSHVGNFYNTKIKPYMLRKDFERFSANDDLFNF--ENLMEGANEIKYAGEYVYWPK----LSARFLGWTLYLKLNCDIRLDPVIPLPCHKRLGPINLLS-NCKINLDIGATLMMEDR---SLFCNGPYLTDD-------CKHSVLEIDWQANDGTITTLPMLFSTRYVGAKHQVILNYLINNENILACRFTSEYSYLGDIDLNRLRISNYEDTDEENMDIDDATVAVNQKFEMKISPASLFKQEFEEKIKDCMLSINEYMTEAMPSNNIVG--MFLVEYMHLNDYTTLPYLAINVWQYCLEKIDLHNQYTLEDILMFLYILCLNVSQGDE------------VVCERLYHSNQIYLSSKDNA-QKFFASLNFFT--EPQRALGYYFAIHFAVFKKFNT----------WQLTSVNALACELEPNFISFGFFKKIKH--NEVSYVFNGKIYEFVKNKKEHDIASKFDKADETQVSVFKFNNIMNFYLTEDGMFDVCTKTYRETCPFLVVSALKKNYITKS-KQFVSKPVFTDLFNAMRNDVMLLRTYHAKKFEKQFCSIYANYKDCALMGNSFADRQVEIGDKIKTMVRWLLSTDESMLVLLMM---KLRLNDYLHNI------------------IKEGDDLDLMALQVAVALQFLWPKSAITSYVWCLLK-SHHFFELCFQEYVMETN---DCFIGLNDIQYYKQRKTLVERLHFYLKT-NILTLLDQHDIDSHMCEYIKSITYGSE---------------------------------------QKPYERWRVIKKINTIYSKYRRVPLKF-PVWTDKLIEFGE-HDDMYIWLTRFYKRMYLKAHMHNISGEQENMITNFVQGFCYFRVLTNFNTVNSKAIINFCASLAIPTDYEKMCLNITSEPNCGKSSLFELLDKIILVYKSDRKVYD-HTA-ENNSSKIKRFESQLYIMNEAEITTKGYLKNIADSTKFDSANRKYGPEESFYANYKVMITNNEMLYIKDGYDKACSNRIGLIYIDHSFESDIEPFDGSIYECYEKKRYHEIKDINMKLKSPVKQFLANVLFYNSDPKTGYVYYKSILKNDKCYKHNKKCLSIYNDRLEALLYVLDIREI-KNTSEDTTSCRFNESTLIEMVTKSVELVKQMVHYK------KRESI----------DVNTLVSDFRRKYGRSKFYNAENNSYENLNIITLEKNFRNIKPRLKS
Q9DVW1_9BACU/1-1118 MSLSIVLDAYQTQETFSDKDCVSSEYWYFYNERTGQYK-RRGCDNINFLVDIFGEHITE----------------------------------------------NDNHSWCHVANYCSTRVTPYMLASDYDRIKEKINFYQLLQS---EKANKCLRMGRYVVWPN----LSAVFLGWRIYLQLAFGVKLSNLIPMKFHQDLGDYNLLCDESVNF-DCLCVIKHQDR---LLFTNGHVVETD-------V--KVMKLVYNNE-----VCYVTFAGQFVGTKNKVLINYILNETQITECSFVDSFKDYGKIDLQCLRTVTMADRTE-CMDVEELSD--IERETIKVSPSSVWFNEFDVKITECLKIINDEMDEAMPNHGC--GPNFLEDYLTLSNFVTFTYLIVNVWKFCEENIMLHDQQKVEDYLLFLHLLCSKVSNDYE----------------HLYEYNRIYLTSEENA-KSFFNSLNFFK--QPQKALGYYFAIHFAVFKKFNT----------WKISSNFVRECELDSNVISFGFFKKIKH--NSDNYIFNGKIYEYYKNKKEHDLAMGFRSADEVQVSDLRFNYIRDFYMTEHGNFDSRKKNYKEPCPFVVLSALKKCYIDIE-QKFIGQKMFSTLMGAMKNDVVLFKAYHAKKFEKAFNNVQSNLFDCRLLK--LHEKTIMLSDKLKCMVDWLLSVDVGMTILLLI---KKNAQDLLHNFFN-----------------KDDEEIHLMGLRVALTLQFLIPKSEITIFMWSLVK-CQTIYDILSNDLTDNE---------LKELHFYENRNNVIDCVYFNLKRFNYCEPLNDDILKEWIISGSERA--------------------------------------------INKHKHAKQVNRVNVIYNKLKKIPITY-AIWTDRMIEYNHTTDDLYSFMVRFYIRIYLAK--YITDDMDIKLLHNVVKGFCYFRVLTNFNATNSKAIINFCASLAIPTDYEKMALTITSKPHCGKSSLYELLDKIILVHKCDKNVYD-IHN-EDKTTKIKKYESQLYIMNEAAITTKKYLKTIADSTKFDSANRKYGPEESFNANYKVMITNNEMLFVKDGYDRGCSNRLGLIYMDHEFCNDEI-FDGSVYENYDKKKYPEIKDVTIILVVPVQHFLANVLFYNSDPKSGYVFYKNILKNDLCYKHNKKCLYIYNSCFEAMLYVLNINEC-KDEDQ-----KFSEKHFIDVLNKCIPFVKTIVHYKLQ------EKV----------DEHRLCSEFRRKYNKPKFYNADTKMYHNLSIVSGEVDFRTNRPQLKS